RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 MAGT1Q9H0U3 335 aa11.09□□□□□ -0.63
LIG1-214ENST00000597146 FLG2Q5D862 2391 aaPredicted RBP11.08□□□□□ -0.64
LIG1-214ENST00000597146 C9orf170A2RU37 121 aa11.08□□□□□ -0.64
LIG1-214ENST00000597146 FAM90A26D6RGX4 464 aa11.08□□□□□ -0.64
LIG1-214ENST00000597146 IGKV1-17P01599 117 aa11.08□□□□□ -0.64
LIG1-214ENST00000597146 IL7P13232 177 aa11.08□□□□□ -0.64
LIG1-214ENST00000597146 P2RY1P47900 373 aa11.08□□□□□ -0.64
LIG1-214ENST00000597146 DEFB131AP59861 70 aa11.08□□□□□ -0.64
LIG1-214ENST00000597146 GGNBP1Q5YKI7 109 aa11.08□□□□□ -0.64
LIG1-214ENST00000597146 ZNF414Q96IQ9 312 aa11.08□□□□□ -0.64
LIG1-214ENST00000597146 MS4A6AQ9H2W1 248 aa11.08□□□□□ -0.64
LIG1-214ENST00000597146 VSIRQ9H7M9 311 aa11.08□□□□□ -0.64
LIG1-214ENST00000597146 ZFAND3Q9H8U3 227 aa11.08□□□□□ -0.64
LIG1-214ENST00000597146 CLEC5AQ9NY25 188 aa11.08□□□□□ -0.64
LIG1-214ENST00000597146 FLVCR2Q9UPI3 526 aa11.08□□□□□ -0.64
LIG1-214ENST00000597146 HELTA6NFD8 242 aa11.07□□□□□ -0.64
LIG1-214ENST00000597146 SYNGR2O43760 224 aa11.07□□□□□ -0.64
LIG1-214ENST00000597146 IL4P05112 153 aa11.07□□□□□ -0.64
LIG1-214ENST00000597146 HNRNPCP07910 306 aaKnown RBP eCLIP11.07□□□□□ -0.64
LIG1-214ENST00000597146 OR4E1P0C645 316 aa11.07□□□□□ -0.64
LIG1-214ENST00000597146 IGLC1P0CG04 106 aa11.07□□□□□ -0.64
LIG1-214ENST00000597146 INAFM2P0DMQ5 153 aa11.07□□□□□ -0.64
LIG1-214ENST00000597146 CRYBB3P26998 211 aa11.07□□□□□ -0.64
LIG1-214ENST00000597146 AP2S1P53680 142 aaPredicted RBP11.07□□□□□ -0.64
LIG1-214ENST00000597146 FAM90A2PQ658T7 463 aa11.07□□□□□ -0.64
LIG1-214ENST00000597146 FAM24BQ8N5W8 94 aa11.07□□□□□ -0.64
LIG1-214ENST00000597146 PPP1R14BQ96C90 147 aa11.07□□□□□ -0.64
LIG1-214ENST00000597146 PBDC1Q9BVG4 233 aa11.07□□□□□ -0.64
LIG1-214ENST00000597146 EPM2AB3EWF7 344 aa11.06□□□□□ -0.64
LIG1-214ENST00000597146 ANXA7P20073 488 aaKnown RBP11.06□□□□□ -0.64
LIG1-214ENST00000597146 SPANXN5Q5MJ07 72 aa11.06□□□□□ -0.64
LIG1-214ENST00000597146 LILRB2Q8N423 598 aa11.06□□□□□ -0.64
LIG1-214ENST00000597146 TMEM170AQ8WVE7 144 aa11.06□□□□□ -0.64
LIG1-214ENST00000597146 SNRPGP15A8MWD9 76 aa11.05□□□□□ -0.64
LIG1-214ENST00000597146 PITX3O75364 302 aa11.05□□□□□ -0.64
LIG1-214ENST00000597146 TOMM40O96008 361 aa11.05□□□□□ -0.64
LIG1-214ENST00000597146 DHRS2Q13268 280 aa11.05□□□□□ -0.64
LIG1-214ENST00000597146 GAMTQ14353 236 aa11.05□□□□□ -0.64
LIG1-214ENST00000597146 STHQ8IWL8 128 aa11.05□□□□□ -0.64
LIG1-214ENST00000597146 OR51G1Q8NGK1 321 aa11.05□□□□□ -0.64
LIG1-214ENST00000597146 GSKIPQ9P0R6 139 aa11.05□□□□□ -0.64
LIG1-214ENST00000597146 TBC1D24Q9ULP9 559 aa11.05□□□□□ -0.64
LIG1-214ENST00000597146 STRAPQ9Y3F4 350 aaKnown RBP11.05□□□□□ -0.64
LIG1-214ENST00000597146 TRAV2A0A0B4J234 112 aa11.04□□□□□ -0.64
LIG1-214ENST00000597146 ADAP1O75689 374 aa11.04□□□□□ -0.64
LIG1-214ENST00000597146 SCGB1D2O95969 90 aa11.04□□□□□ -0.64
LIG1-214ENST00000597146 PSG1P11464 419 aa11.04□□□□□ -0.64
LIG1-214ENST00000597146 NKX2-1P43699 371 aaPredicted RBP11.04□□□□□ -0.64
LIG1-214ENST00000597146 ZNF846Q147U1 533 aa11.04□□□□□ -0.64
LIG1-214ENST00000597146 SPATA12Q7Z6I5 190 aa11.04□□□□□ -0.64
LIG1-214ENST00000597146 TRPT1Q86TN4 253 aaKnown RBP11.04□□□□□ -0.64
LIG1-214ENST00000597146 SDHCQ99643 169 aaPredicted RBP11.04□□□□□ -0.64
LIG1-214ENST00000597146 VPS13BQ7Z7G8 4022 aa11.03□□□□□ -0.64
LIG1-214ENST00000597146 LYRM1O43325 122 aa11.03□□□□□ -0.64
LIG1-214ENST00000597146 NUP62P37198 522 aaPredicted RBP11.03□□□□□ -0.64
LIG1-214ENST00000597146 OR2F1Q13607 317 aa11.03□□□□□ -0.64
LIG1-214ENST00000597146 MZT2BQ6NZ67 158 aa11.03□□□□□ -0.64
LIG1-214ENST00000597146 S100ZQ8WXG8 99 aa11.03□□□□□ -0.64
LIG1-214ENST00000597146 PSENENQ9NZ42 101 aa11.03□□□□□ -0.64
LIG1-214ENST00000597146 TRAV6A0A075B6T7 132 aa11.02□□□□□ -0.65
LIG1-214ENST00000597146 SMCO3A2RU48 225 aa11.02□□□□□ -0.65
LIG1-214ENST00000597146 LYZP61626 148 aa11.02□□□□□ -0.65
LIG1-214ENST00000597146 IAH1Q2TAA2 248 aaPredicted RBP11.02□□□□□ -0.65
LIG1-214ENST00000597146 RNF212Q495C1 297 aa11.02□□□□□ -0.65
LIG1-214ENST00000597146 MORN3Q6PF18 240 aaPredicted RBP11.02□□□□□ -0.65
LIG1-214ENST00000597146 C16orf54Q6UWD8 224 aa11.02□□□□□ -0.65
LIG1-214ENST00000597146 CSNK1G2-AS1Q8NCQ2 148 aa11.02□□□□□ -0.65
LIG1-214ENST00000597146 RNF125Q96EQ8 232 aa11.02□□□□□ -0.65
LIG1-214ENST00000597146 FAM240BA0A1B0GVZ2 78 aa11.01□□□□□ -0.65
LIG1-214ENST00000597146 FAM25EA8MYX2 175 aa11.01□□□□□ -0.65
LIG1-214ENST00000597146 H3BP45 60 aa11.01□□□□□ -0.65
LIG1-214ENST00000597146 TCRBP04435 133 aa11.01□□□□□ -0.65
LIG1-214ENST00000597146 ZNF688P0C7X2 276 aa11.01□□□□□ -0.65
LIG1-214ENST00000597146 SPP1P10451 314 aa11.01□□□□□ -0.65
LIG1-214ENST00000597146 S100A7P31151 101 aa11.01□□□□□ -0.65
LIG1-214ENST00000597146 SNRPD3P62318 126 aaKnown RBP11.01□□□□□ -0.65
LIG1-214ENST00000597146 POLR2GP62487 172 aaKnown RBP eCLIP11.01□□□□□ -0.65
LIG1-214ENST00000597146 ID3Q02535 119 aa11.01□□□□□ -0.65
LIG1-214ENST00000597146 ZNF90Q03938 601 aa11.01□□□□□ -0.65
LIG1-214ENST00000597146 AKR1C1Q04828 323 aa11.01□□□□□ -0.65
LIG1-214ENST00000597146 USF2Q15853 346 aaPredicted RBP11.01□□□□□ -0.65
LIG1-214ENST00000597146 TMEM41BQ5BJD5 291 aa11.01□□□□□ -0.65
LIG1-214ENST00000597146 CCDC32Q9BV29 185 aa11.01□□□□□ -0.65
LIG1-214ENST00000597146 C20orf85Q9H1P6 137 aa11.01□□□□□ -0.65
LIG1-214ENST00000597146 C5orf51A6NDU8 294 aa11□□□□□ -0.65
LIG1-214ENST00000597146 KNCNA6PVL3 124 aa11□□□□□ -0.65
LIG1-214ENST00000597146 K7EQG2 157 aa11□□□□□ -0.65
LIG1-214ENST00000597146 L7N2F9 121 aa11□□□□□ -0.65
LIG1-214ENST00000597146 PLA2G10O15496 165 aa11□□□□□ -0.65
LIG1-214ENST00000597146 SSSCA1O60232 199 aa11□□□□□ -0.65
LIG1-214ENST00000597146 CFDP00746 253 aaPredicted RBP11□□□□□ -0.65
LIG1-214ENST00000597146 VAMP2P63027 116 aa11□□□□□ -0.65
LIG1-214ENST00000597146 OR8G2PQ6IF36 304 aa11□□□□□ -0.65
LIG1-214ENST00000597146 SIGLEC15Q6ZMC9 328 aa11□□□□□ -0.65
LIG1-214ENST00000597146 C6orf223Q8N319 242 aa11□□□□□ -0.65
LIG1-214ENST00000597146 TRGV9Q99603 122 aa11□□□□□ -0.65
LIG1-214ENST00000597146 U3KQE9 123 aa11□□□□□ -0.65
LIG1-214ENST00000597146 BUB3O43684 328 aa10.99□□□□□ -0.65
LIG1-214ENST00000597146 H2AFB2P0C5Z0 115 aa10.99□□□□□ -0.65
LIG1-214ENST00000597146 ID1P41134 155 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms