RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 GVQW1Q8N7I0 195 aa4.06□□□□□ -1.76
DNMT1-220ENST00000589351 INO80EQ8NBZ0 244 aaPredicted RBP4.06□□□□□ -1.76
DNMT1-220ENST00000589351 DUSP18Q8NEJ0 188 aa4.06□□□□□ -1.76
DNMT1-220ENST00000589351 LGALS14Q8TCE9 139 aa4.06□□□□□ -1.76
DNMT1-220ENST00000589351 PACRGQ96M98 296 aaPredicted RBP4.06□□□□□ -1.76
DNMT1-220ENST00000589351 CCL28Q9NRJ3 127 aa4.06□□□□□ -1.76
DNMT1-220ENST00000589351 APLNQ9ULZ1 77 aa4.06□□□□□ -1.76
DNMT1-220ENST00000589351 IGKV3-7A0A075B6H7 116 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 A0A1B0GW64 132 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 TRDV1A0A1B0GX56 115 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 A0A1W2PS18 150 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 C15orf61A6NNL5 157 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 RHODO00212 210 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 ZNF207O43670 478 aaKnown RBP4.05□□□□□ -1.76
DNMT1-220ENST00000589351 GNG7O60262 68 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 P0DMU3 169 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 FAM231AP0DMU4 169 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 FAM231CP0DMU5 169 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 MIFP14174 115 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 S100GP29377 79 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 UBE2MP61081 183 aaKnown RBP4.05□□□□□ -1.76
DNMT1-220ENST00000589351 HERV-K104P61576 105 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 KLF9Q13886 244 aaPredicted RBP4.05□□□□□ -1.76
DNMT1-220ENST00000589351 OGFRL1Q5TC84 451 aaPredicted RBP4.05□□□□□ -1.76
DNMT1-220ENST00000589351 AADACL3Q5VUY0 350 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 PVRIGQ6DKI7 326 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 MORN3Q6PF18 240 aaPredicted RBP4.05□□□□□ -1.76
DNMT1-220ENST00000589351 TCF24Q7RTU0 167 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 TMEM17Q86X19 198 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 CMTM1Q8IZ96 169 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 BEST4Q8NFU0 473 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 OR10W1Q8NGF6 305 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 DTD1Q8TEA8 209 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 LSM10Q969L4 123 aaKnown RBP4.05□□□□□ -1.76
DNMT1-220ENST00000589351 DGCR14Q96DF8 476 aaKnown RBP4.05□□□□□ -1.76
DNMT1-220ENST00000589351 RNF2Q99496 336 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 TSC22D3Q99576 134 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 RNF126Q9BV68 326 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 DUSP21Q9H596 190 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 COMMD9Q9P000 198 aa4.05□□□□□ -1.76
DNMT1-220ENST00000589351 F11RQ9Y624 299 aaKnown RBP4.05□□□□□ -1.76
DNMT1-220ENST00000589351 IGHV3OR16-8A0A075B7F1 116 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 IGHV3-21A0A0B4J1V1 117 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 TRAV2A0A0B4J234 112 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 TRAV3A0A0B4J244 114 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 TMEM235A6NFC5 223 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 DEFB4AO15263 64 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 OXTP01178 125 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 PPYP01298 95 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 IFNA21P01568 189 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 IFNA17P01571 189 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 APOHP02749 345 aaPredicted RBP4.04□□□□□ -1.76
DNMT1-220ENST00000589351 CTSGP08311 255 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 OR4E1P0C645 316 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 F2RP25116 425 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 HLA-DMBP28068 263 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 RPL13AP40429 203 aaKnown RBP4.04□□□□□ -1.76
DNMT1-220ENST00000589351 LPAR6P43657 344 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 EIF2B2P49770 351 aaKnown RBP4.04□□□□□ -1.76
DNMT1-220ENST00000589351 OR10A3P58181 314 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 BRWD1-AS2P59051 145 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 FXYD4P59646 89 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 DEFB131AP59861 70 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 NUTF2P61970 127 aaKnown RBP4.04□□□□□ -1.76
DNMT1-220ENST00000589351 ERHP84090 104 aaKnown RBP4.04□□□□□ -1.76
DNMT1-220ENST00000589351 EIF4EBP1Q13541 118 aaPredicted RBP4.04□□□□□ -1.76
DNMT1-220ENST00000589351 ZNF773Q6PK81 442 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 LINC01561Q8N1V8 128 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 GBGT1Q8N5D6 347 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 OR1P1Q8NH06 330 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 OR51H1Q8NH63 302 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 THAP6Q8TBB0 222 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 BAALCQ8WXS3 180 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 ISOC2Q96AB3 205 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 SLC25A46Q96AG3 418 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 NARS2Q96I59 477 aaKnown RBP4.04□□□□□ -1.76
DNMT1-220ENST00000589351 OR10C1Q96KK4 312 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 RSG1Q9BU20 258 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 DIABLOQ9NR28 239 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 NDUFA4L2Q9NRX3 87 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 ELF5Q9UKW6 265 aaPredicted RBP4.04□□□□□ -1.76
DNMT1-220ENST00000589351 PRNDQ9UKY0 176 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 OR51B2Q9Y5P1 312 aa4.04□□□□□ -1.76
DNMT1-220ENST00000589351 FRAS1Q86XX4 4008 aa4.03□□□□□ -1.76
DNMT1-220ENST00000589351 IGHV4-4A0A075B6R2 117 aa4.03□□□□□ -1.76
DNMT1-220ENST00000589351 TMEM238C9JI98 176 aa4.03□□□□□ -1.76
DNMT1-220ENST00000589351 K7EIM0 57 aa4.03□□□□□ -1.76
DNMT1-220ENST00000589351 S1PR2O95136 353 aa4.03□□□□□ -1.76
DNMT1-220ENST00000589351 KRASP01116 189 aa4.03□□□□□ -1.76
DNMT1-220ENST00000589351 IFNA10P01566 189 aa4.03□□□□□ -1.76
DNMT1-220ENST00000589351 NPPCP23582 126 aa4.03□□□□□ -1.76
DNMT1-220ENST00000589351 SNCAP37840 140 aa4.03□□□□□ -1.76
DNMT1-220ENST00000589351 CEBPGP53567 150 aa4.03□□□□□ -1.76
DNMT1-220ENST00000589351 SUB1P53999 127 aaKnown RBP eCLIP4.03□□□□□ -1.76
DNMT1-220ENST00000589351 S100A12P80511 92 aa4.03□□□□□ -1.76
DNMT1-220ENST00000589351 WT1-ASQ06250 92 aa4.03□□□□□ -1.76
DNMT1-220ENST00000589351 KRTAP5-1Q6L8H4 278 aa4.03□□□□□ -1.76
DNMT1-220ENST00000589351 FAM122CQ6P4D5 195 aa4.03□□□□□ -1.76
DNMT1-220ENST00000589351 ZNF818PQ6ZRF7 136 aa4.03□□□□□ -1.76
DNMT1-220ENST00000589351 HOGA1Q86XE5 327 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms