RNA–Protein interactions for RNA: ENST00000585685.5

APOC4-APOC2-201, Transcript of APOC4-APOC2 readthrough (NMD candidate), humanhuman

TSL 5

Gene APOC4-APOC2, Length 1,829 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2-201ENST00000585685 TCRAP04437 139 aa13.03□□□□□ -0.32
APOC4-APOC2-201ENST00000585685 HIST1H1EP10412 219 aaKnown RBP13.03□□□□□ -0.32
APOC4-APOC2-201ENST00000585685 C9orf152Q5JTZ5 239 aa13.03□□□□□ -0.32
APOC4-APOC2-201ENST00000585685 DYNAPQ8N1N2 210 aa13.03□□□□□ -0.32
APOC4-APOC2-201ENST00000585685 WIPF2Q8TF74 440 aaPredicted RBP13.03□□□□□ -0.32
APOC4-APOC2-201ENST00000585685 IGFBPL1Q8WX77 278 aa13.03□□□□□ -0.32
APOC4-APOC2-201ENST00000585685 TMEM68Q96MH6 324 aa13.03□□□□□ -0.32
APOC4-APOC2-201ENST00000585685 RBM14Q96PK6 669 aaKnown RBP13.03□□□□□ -0.32
APOC4-APOC2-201ENST00000585685 SIRPDQ9H106 197 aa13.03□□□□□ -0.32
APOC4-APOC2-201ENST00000585685 OTORQ9NRC9 128 aa13.03□□□□□ -0.32
APOC4-APOC2-201ENST00000585685 TSTD3H0UI37 97 aa13.02□□□□□ -0.32
APOC4-APOC2-201ENST00000585685 PAX1P15863 534 aa13.02□□□□□ -0.32
APOC4-APOC2-201ENST00000585685 PAFAH1B2P68402 229 aa13.02□□□□□ -0.32
APOC4-APOC2-201ENST00000585685 SLC35B1P78383 322 aa13.02□□□□□ -0.32
APOC4-APOC2-201ENST00000585685 ASPHD1Q5U4P2 390 aa13.02□□□□□ -0.32
APOC4-APOC2-201ENST00000585685 ITLN2Q8WWU7 325 aaPredicted RBP13.02□□□□□ -0.32
APOC4-APOC2-201ENST00000585685 ZNF48Q96MX3 618 aaPredicted RBP13.02□□□□□ -0.32
APOC4-APOC2-201ENST00000585685 ZNF586Q9NXT0 402 aa13.02□□□□□ -0.32
APOC4-APOC2-201ENST00000585685 IGLV11-55A0A075B6I3 123 aa13.02□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 TRAV30A0A087WSZ9 112 aa13.02□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 NDUFS7O75251 213 aa13.02□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 LTAP01374 205 aa13.02□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 EFNA4P52798 201 aa13.02□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 USF2Q15853 346 aaPredicted RBP13.02□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 IQCJQ1A5X6 159 aa13.02□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 MRPL54Q6P161 138 aaKnown RBP13.02□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 TTC9CQ8N5M4 171 aa13.02□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 ARPC1AQ92747 370 aa13.02□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 SHANK2-AS3Q9BTD1 123 aa13.02□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 UBTD1Q9HAC8 227 aa13.02□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 H3BRN7 92 aa13.01□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 TPPP2P59282 170 aa13.01□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 OR10J3Q5JRS4 329 aa13.01□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 ZNF491Q8N8L2 437 aa13.01□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 TSKUQ8WUA8 353 aa13.01□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 FANCD2OSQ96PS1 177 aa13.01□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 TBL2Q9Y4P3 447 aaKnown RBP13.01□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 WNK2Q9Y3S1 2297 aa13□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 WI2-2373I1.2A0A1W2PRP0 233 aa13□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 SERF1AO75920 110 aa13□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 RAB4BP61018 213 aa13□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 PRR27Q6MZM9 219 aa13□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 RNF125Q96EQ8 232 aa13□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 ZNF331Q9NQX6 463 aaPredicted RBP13□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 ZNF492Q9P255 531 aa13□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 RPH3ALQ9UNE2 315 aa13□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 RNF24Q9Y225 148 aa13□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 TACC2O95359 2948 aa13□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 IGHV2-70DA0A0C4DH43 119 aa12.99□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 H3BTX0 84 aa12.99□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 NDPQ00604 133 aa12.99□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 BAGE3Q86Y29 109 aa12.99□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 BPIFA4PQ86YQ2 179 aa12.99□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 NUP35Q8NFH5 326 aa12.99□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 SGK494Q96LW2 274 aa12.99□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 MS4A10Q96PG2 267 aa12.99□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 PRSS22Q9GZN4 317 aa12.99□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 DDTP30046 118 aa12.99□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 CT83Q5H943 113 aa12.99□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 KLF17Q5JT82 389 aaPredicted RBP12.99□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 FAM209BQ5JX69 171 aa12.99□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 ZNF664Q8N3J9 261 aa12.99□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 GNB4Q9HAV0 340 aa12.99□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 CHD8Q9HCK8 2581 aa12.98□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 TRBV6-1A0A0K0K1D8 114 aa12.98□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 C19orf71A6NCJ1 209 aa12.98□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 NCBP2LA6PVI3 153 aaKnown RBP12.98□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 F2Z2F3 143 aa12.98□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 BMPR1BO00238 502 aa12.98□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 GNG7O60262 68 aa12.98□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 IGLC2P0DOY2 106 aa12.98□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 TMEM11P17152 192 aa12.98□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 MFAP4P55083 255 aa12.98□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 DEFA6Q01524 100 aa12.98□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 NEU1Q99519 415 aa12.98□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 PRO1933Q9H354 126 aa12.98□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 TRBV19A0A075B6N1 114 aa12.97□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 MRPS12O15235 138 aaKnown RBP12.97□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 TOX4O94842 621 aa12.97□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 IL4P05112 153 aa12.97□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 UQCRFS1P47985 274 aa12.97□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 UBE2E1P51965 193 aa12.97□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 ATP5L2Q7Z4Y8 100 aa12.97□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 Q86TA4 180 aa12.97□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 LYPD1Q8N2G4 141 aa12.97□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 OR4F17Q8NGA8 305 aa12.97□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 NOL4LQ96MY1 436 aaPredicted RBP12.97□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 RPP21Q9H633 154 aaKnown RBP12.97□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 F8W735 103 aaPredicted RBP12.97□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 APCSP02743 223 aa12.97□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 LINC00322Q6ZN03 302 aaPredicted RBP12.97□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 S100A7AQ86SG5 101 aa12.97□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 TBX15Q96SF7 602 aa12.97□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 THYN1Q9P016 225 aa12.97□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 HIGD1CA8MV81 97 aa12.96□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 C19orf84I3L1E1 186 aa12.96□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 IGLV2-11P01706 119 aa12.96□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 GNLYP22749 145 aa12.96□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 SRIP30626 198 aa12.96□□□□□ -0.33
APOC4-APOC2-201ENST00000585685 BRS3P32247 399 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 226.4 ms