RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 LINC00052Q96N35 136 aa13.07□□□□□ -0.32
SRSF1-208ENST00000584773 C7orf50Q9BRJ6 194 aaKnown RBP13.07□□□□□ -0.32
SRSF1-208ENST00000584773 SMCO3A2RU48 225 aa13.06□□□□□ -0.32
SRSF1-208ENST00000584773 PMS2P5A8MQ11 134 aa13.06□□□□□ -0.32
SRSF1-208ENST00000584773 CCSO14618 274 aa13.06□□□□□ -0.32
SRSF1-208ENST00000584773 IFNA21P01568 189 aa13.06□□□□□ -0.32
SRSF1-208ENST00000584773 FABP1P07148 127 aa13.06□□□□□ -0.32
SRSF1-208ENST00000584773 NUP62P37198 522 aaPredicted RBP13.06□□□□□ -0.32
SRSF1-208ENST00000584773 PAX9P55771 341 aa13.06□□□□□ -0.32
SRSF1-208ENST00000584773 FXYD7P58549 80 aa13.06□□□□□ -0.32
SRSF1-208ENST00000584773 C20orf85Q9H1P6 137 aa13.06□□□□□ -0.32
SRSF1-208ENST00000584773 XCL2Q9UBD3 114 aa13.06□□□□□ -0.32
SRSF1-208ENST00000584773 KLK5Q9Y337 293 aaPredicted RBP13.06□□□□□ -0.32
SRSF1-208ENST00000584773 ZNF705EA8MWA4 302 aaPredicted RBP13.05□□□□□ -0.32
SRSF1-208ENST00000584773 LYRM1O43325 122 aa13.05□□□□□ -0.32
SRSF1-208ENST00000584773 ORM2P19652 201 aa13.05□□□□□ -0.32
SRSF1-208ENST00000584773 RRAS2P62070 204 aaPredicted RBP13.05□□□□□ -0.32
SRSF1-208ENST00000584773 IAH1Q2TAA2 248 aaPredicted RBP13.05□□□□□ -0.32
SRSF1-208ENST00000584773 OR8I2Q8N0Y5 310 aa13.05□□□□□ -0.32
SRSF1-208ENST00000584773 C17orf77Q96MU5 243 aa13.05□□□□□ -0.32
SRSF1-208ENST00000584773 SLC25A32Q9H2D1 315 aa13.05□□□□□ -0.32
SRSF1-208ENST00000584773 SLC25A22Q9H936 323 aa13.05□□□□□ -0.32
SRSF1-208ENST00000584773 DOK5Q9P104 306 aa13.05□□□□□ -0.32
SRSF1-208ENST00000584773 ELOA3CA0A087WX78 387 aaPredicted RBP13.04□□□□□ -0.32
SRSF1-208ENST00000584773 F6UB75 175 aa13.04□□□□□ -0.32
SRSF1-208ENST00000584773 METTL15P1P0C7V9 234 aa13.04□□□□□ -0.32
SRSF1-208ENST00000584773 HLA-DRB4P13762 266 aa13.04□□□□□ -0.32
SRSF1-208ENST00000584773 C1orf194Q5T5A4 169 aa13.04□□□□□ -0.32
SRSF1-208ENST00000584773 ZBTB8BQ8NAP8 495 aaPredicted RBP13.04□□□□□ -0.32
SRSF1-208ENST00000584773 OR1B1Q8NGR6 318 aa13.04□□□□□ -0.32
SRSF1-208ENST00000584773 MITD1Q8WV92 249 aa13.04□□□□□ -0.32
SRSF1-208ENST00000584773 C20orf173Q96LM9 149 aa13.04□□□□□ -0.32
SRSF1-208ENST00000584773 SEPSECSQ9HD40 501 aaKnown RBP13.04□□□□□ -0.32
SRSF1-208ENST00000584773 GSKIPQ9P0R6 139 aa13.04□□□□□ -0.32
SRSF1-208ENST00000584773 PFDN2Q9UHV9 154 aa13.04□□□□□ -0.32
SRSF1-208ENST00000584773 HLA-DRB4X5D2U9 266 aa13.04□□□□□ -0.32
SRSF1-208ENST00000584773 TRAV6A0A075B6T7 132 aa13.03□□□□□ -0.32
SRSF1-208ENST00000584773 TMEM41BQ5BJD5 291 aa13.03□□□□□ -0.32
SRSF1-208ENST00000584773 SMIM8Q96KF7 97 aa13.03□□□□□ -0.32
SRSF1-208ENST00000584773 SEC22CQ9BRL7 303 aa13.03□□□□□ -0.32
SRSF1-208ENST00000584773 SCRT1Q9BWW7 348 aa13.03□□□□□ -0.32
SRSF1-208ENST00000584773 NDUFA13Q9P0J0 144 aa13.03□□□□□ -0.32
SRSF1-208ENST00000584773 TBC1D24Q9ULP9 559 aa13.03□□□□□ -0.32
SRSF1-208ENST00000584773 RCL1Q9Y2P8 373 aaKnown RBP13.03□□□□□ -0.32
SRSF1-208ENST00000584773 ZNF98A6NK75 572 aa13.02□□□□□ -0.33
SRSF1-208ENST00000584773 MIFP14174 115 aa13.02□□□□□ -0.33
SRSF1-208ENST00000584773 PSMB3P49720 205 aa13.02□□□□□ -0.33
SRSF1-208ENST00000584773 TMEM14EPQ6UXP3 125 aa13.02□□□□□ -0.33
SRSF1-208ENST00000584773 CYP2G1PQ6ZSU1 146 aa13.02□□□□□ -0.33
SRSF1-208ENST00000584773 TMEM144Q7Z5S9 345 aa13.02□□□□□ -0.33
SRSF1-208ENST00000584773 BPIFCQ8NFQ6 507 aa13.02□□□□□ -0.33
SRSF1-208ENST00000584773 MFFQ9GZY8 342 aa13.02□□□□□ -0.33
SRSF1-208ENST00000584773 SAV1Q9H4B6 383 aaPredicted RBP13.02□□□□□ -0.33
SRSF1-208ENST00000584773 CELA1Q9UNI1 258 aa13.02□□□□□ -0.33
SRSF1-208ENST00000584773 VPS13DQ5THJ4 4388 aa13.02□□□□□ -0.33
SRSF1-208ENST00000584773 MBPP02686 304 aaPredicted RBP13.01□□□□□ -0.33
SRSF1-208ENST00000584773 TCRBP04435 133 aa13.01□□□□□ -0.33
SRSF1-208ENST00000584773 ID1P41134 155 aa13.01□□□□□ -0.33
SRSF1-208ENST00000584773 ARL16Q0P5N6 197 aa13.01□□□□□ -0.33
SRSF1-208ENST00000584773 IGFL4Q6B9Z1 124 aa13.01□□□□□ -0.33
SRSF1-208ENST00000584773 RSG1Q9BU20 258 aa13.01□□□□□ -0.33
SRSF1-208ENST00000584773 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13□□□□□ -0.33
SRSF1-208ENST00000584773 FOXI2Q6ZQN5 318 aa13□□□□□ -0.33
SRSF1-208ENST00000584773 ZNF767PQ75MW2 155 aa13□□□□□ -0.33
SRSF1-208ENST00000584773 OR4B1Q8NGF8 309 aa13□□□□□ -0.33
SRSF1-208ENST00000584773 TMEM147Q9BVK8 224 aa13□□□□□ -0.33
SRSF1-208ENST00000584773 SLC35B3Q9H1N7 401 aa13□□□□□ -0.33
SRSF1-208ENST00000584773 NUDT15Q9NV35 164 aa13□□□□□ -0.33
SRSF1-208ENST00000584773 H3BRN7 92 aa12.99□□□□□ -0.33
SRSF1-208ENST00000584773 DEDDO75618 318 aa12.99□□□□□ -0.33
SRSF1-208ENST00000584773 CFDP00746 253 aaPredicted RBP12.99□□□□□ -0.33
SRSF1-208ENST00000584773 IL5P05113 134 aa12.99□□□□□ -0.33
SRSF1-208ENST00000584773 HLA-DMBP28068 263 aa12.99□□□□□ -0.33
SRSF1-208ENST00000584773 DLK1P80370 383 aa12.99□□□□□ -0.33
SRSF1-208ENST00000584773 SLC38A11Q08AI6 406 aa12.99□□□□□ -0.33
SRSF1-208ENST00000584773 Q6ZTC4 211 aa12.99□□□□□ -0.33
SRSF1-208ENST00000584773 RPP25LQ8N5L8 163 aaKnown RBP12.99□□□□□ -0.33
SRSF1-208ENST00000584773 ZNF709Q8N972 641 aa12.99□□□□□ -0.33
SRSF1-208ENST00000584773 C16orf92Q96LL3 132 aa12.99□□□□□ -0.33
SRSF1-208ENST00000584773 UHRF2Q96PU4 802 aa12.99□□□□□ -0.33
SRSF1-208ENST00000584773 SLC45A2Q9UMX9 530 aa12.99□□□□□ -0.33
SRSF1-208ENST00000584773 FRAS1Q86XX4 4008 aa12.99□□□□□ -0.33
SRSF1-208ENST00000584773 C7orf66A4D0T2 115 aa12.98□□□□□ -0.33
SRSF1-208ENST00000584773 FAM25EA8MYX2 175 aa12.98□□□□□ -0.33
SRSF1-208ENST00000584773 ISLRO14498 428 aa12.98□□□□□ -0.33
SRSF1-208ENST00000584773 LINC00869P0C866 280 aa12.98□□□□□ -0.33
SRSF1-208ENST00000584773 PRB4P10163 310 aaPredicted RBP12.98□□□□□ -0.33
SRSF1-208ENST00000584773 GALR1P47211 349 aa12.98□□□□□ -0.33
SRSF1-208ENST00000584773 NUTF2P61970 127 aaKnown RBP12.98□□□□□ -0.33
SRSF1-208ENST00000584773 SLC25A39Q9BZJ4 359 aaPredicted RBP12.98□□□□□ -0.33
SRSF1-208ENST00000584773 LSM5Q9Y4Y9 91 aaKnown RBP12.98□□□□□ -0.33
SRSF1-208ENST00000584773 IGHV3OR16-12A0A075B7B8 117 aa12.97□□□□□ -0.33
SRSF1-208ENST00000584773 TSC22D2O75157 780 aa12.97□□□□□ -0.33
SRSF1-208ENST00000584773 CNPY1Q3B7I2 92 aa12.97□□□□□ -0.33
SRSF1-208ENST00000584773 FAM78BQ5VT40 261 aa12.97□□□□□ -0.33
SRSF1-208ENST00000584773 RNF182Q8N6D2 247 aa12.97□□□□□ -0.33
SRSF1-208ENST00000584773 OR10P1Q8NGE3 313 aa12.97□□□□□ -0.33
SRSF1-208ENST00000584773 ZNF431Q8TF32 576 aaPredicted RBP12.97□□□□□ -0.33
SRSF1-208ENST00000584773 C2CD4CQ8TF44 421 aa12.97□□□□□ -0.33
SRSF1-208ENST00000584773 SHANK2-AS3Q9BTD1 123 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 834.9 ms