RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 TMEM254Q8TBM7 123 aa0.9□□□□□ -2.27
PPP4R1-227ENST00000583988 MALSU1Q96EH3 234 aa0.9□□□□□ -2.27
PPP4R1-227ENST00000583988 GPER1Q99527 375 aa0.9□□□□□ -2.27
PPP4R1-227ENST00000583988 SH3BGRL3Q9H299 93 aa0.9□□□□□ -2.27
PPP4R1-227ENST00000583988 ACER3Q9NUN7 267 aa0.9□□□□□ -2.27
PPP4R1-227ENST00000583988 UHRF1BP1Q6BDS2 1440 aa0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 RIMBP3CA6NJZ7 1639 aa0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 RIMBP3BA6NNM3 1639 aa0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 RIMBP3Q9UFD9 1639 aa0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 MYH7BA7E2Y1 1941 aa0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 MYH10P35580 1976 aa0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 TRAV3A0A0B4J244 114 aa0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 RIIAD1A6NNX1 92 aa0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 A8MWV9 139 aa0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 GADD45GO95257 159 aa0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 IFNA14P01570 189 aa0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 C1QBP02746 253 aa0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 RNASE4P34096 147 aaKnown RBP0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 PPP1R2P41236 205 aa0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 EIF5AL1Q6IS14 154 aaKnown RBP0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 KRTAP5-10Q6L8G5 202 aa0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 C2orf82Q6UX34 121 aa0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 CROCCP2Q86T23 111 aa0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 STAG3L4Q8TBR4 150 aa0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 LINC00526Q96FQ7 95 aa0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 TEX37Q96LM6 180 aa0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 SLC25A21Q9BQT8 299 aaPredicted RBP0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 GINS3Q9BRX5 216 aa0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 OR2J1Q9GZK6 312 aa0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 PBOV1Q9GZY1 135 aa0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 PRNDQ9UKY0 176 aa0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 LY96Q9Y6Y9 160 aa0.89□□□□□ -2.27
PPP4R1-227ENST00000583988 DIDO1Q9BTC0 2240 aaKnown RBP0.88□□□□□ -2.27
PPP4R1-227ENST00000583988 ADGRB2O60241 1585 aa0.88□□□□□ -2.27
PPP4R1-227ENST00000583988 ROCK1Q13464 1354 aa0.88□□□□□ -2.27
PPP4R1-227ENST00000583988 PFDN1O60925 122 aa0.88□□□□□ -2.27
PPP4R1-227ENST00000583988 LYZL6O75951 148 aa0.88□□□□□ -2.27
PPP4R1-227ENST00000583988 DHFRP00374 187 aa0.88□□□□□ -2.27
PPP4R1-227ENST00000583988 NFYBP25208 207 aa0.88□□□□□ -2.27
PPP4R1-227ENST00000583988 S100A5P33763 92 aa0.88□□□□□ -2.27
PPP4R1-227ENST00000583988 GNG5P63218 68 aa0.88□□□□□ -2.27
PPP4R1-227ENST00000583988 SOSTDC1Q6X4U4 206 aa0.88□□□□□ -2.27
PPP4R1-227ENST00000583988 PDZD9Q8IXQ8 264 aa0.88□□□□□ -2.27
PPP4R1-227ENST00000583988 C3orf56Q8N813 242 aa0.88□□□□□ -2.27
PPP4R1-227ENST00000583988 OR2T35Q8NGX2 323 aa0.88□□□□□ -2.27
PPP4R1-227ENST00000583988 PPTC7Q8NI37 304 aa0.88□□□□□ -2.27
PPP4R1-227ENST00000583988 ZHX1-C8orf76Q96EF9 292 aa0.88□□□□□ -2.27
PPP4R1-227ENST00000583988 NPCDR1Q9BY65 106 aa0.88□□□□□ -2.27
PPP4R1-227ENST00000583988 TMEM126AQ9H061 195 aa0.88□□□□□ -2.27
PPP4R1-227ENST00000583988 BIN3Q9NQY0 253 aa0.88□□□□□ -2.27
PPP4R1-227ENST00000583988 GID8Q9NWU2 228 aa0.88□□□□□ -2.27
PPP4R1-227ENST00000583988 MED29Q9NX70 200 aa0.88□□□□□ -2.27
PPP4R1-227ENST00000583988 KDM6AO15550 1401 aaPredicted RBP0.88□□□□□ -2.27
PPP4R1-227ENST00000583988 UBR2Q8IWV8 1755 aa0.88□□□□□ -2.27
PPP4R1-227ENST00000583988 ARHGEF28Q8N1W1 1705 aaKnown RBP0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 CACNA1BQ00975 2339 aa0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 EML6Q6ZMW3 1958 aa0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 TRBV6-8A0A0A6YYG3 113 aa0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 C17orf112F2Z3M2 114 aa0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 IFNA4P05014 189 aa0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 HLA-EP13747 358 aa0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 OGNP20774 298 aaKnown RBP0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 ZNF93P35789 620 aaPredicted RBP0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 DYNLT3P51808 116 aa0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 GNG3P63215 75 aa0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 C1orf137Q5JT78 98 aa0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 FAM74A1Q5RGS3 127 aa0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 TRIQKQ629K1 86 aa0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 C4orf22Q6V702 233 aa0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 LYG2Q86SG7 212 aa0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 STX12Q86Y82 276 aa0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 FAM19A2Q8N3H0 131 aa0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 STX19Q8N4C7 294 aa0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 ZNF431Q8TF32 576 aaPredicted RBP0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 LYSMD1Q96S90 227 aa0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 PRRT1Q99946 306 aa0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 LAMTOR3Q9UHA4 124 aa0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 PCTPQ9UKL6 214 aa0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 C22orf24Q9Y442 160 aa0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 V9GYQ6 96 aa0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 LAMB4A4D0S4 1761 aa0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 SCN8AQ9UQD0 1980 aa0.87□□□□□ -2.27
PPP4R1-227ENST00000583988 NCAPD3P42695 1498 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 TRBV6-7A0A0A0MS04 114 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 TCRBV4S1A1TA0A5B7 111 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 CCDC160A6NGH7 325 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 ZNF736B4DX44 427 aaPredicted RBP0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 TMEM256-PLSCR3K7ERE1 68 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 M0R378 163 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 PIAS1O75925 651 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 OR10J4P0C629 311 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 SERPINB1P30740 379 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 TAS2R41P59536 307 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 SNCBQ16143 134 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 DEFB113Q30KQ7 82 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 PPP1R2P3Q6NXS1 205 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 C3orf33Q6P1S2 294 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 TEX261Q6UWH6 196 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 GRINAQ7Z429 371 aa0.86□□□□□ -2.27
PPP4R1-227ENST00000583988 CLECL1Q8IZS7 167 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms