RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 IL18Q14116 193 aa9.55□□□□□ -0.88
CSNK1D-219ENST00000581660 SPATA31B1PQ5VZV4 182 aa9.55□□□□□ -0.88
CSNK1D-219ENST00000581660 FAAP20Q6NZ36 180 aa9.55□□□□□ -0.88
CSNK1D-219ENST00000581660 ZFAND1Q8TCF1 268 aa9.55□□□□□ -0.88
CSNK1D-219ENST00000581660 SMIM4Q8WVI0 70 aa9.55□□□□□ -0.88
CSNK1D-219ENST00000581660 SCGB3A2Q96PL1 93 aa9.55□□□□□ -0.88
CSNK1D-219ENST00000581660 ABHD1Q96SE0 405 aa9.55□□□□□ -0.88
CSNK1D-219ENST00000581660 RBM38Q9H0Z9 239 aaKnown RBP9.55□□□□□ -0.88
CSNK1D-219ENST00000581660 ZNF586Q9NXT0 402 aa9.55□□□□□ -0.88
CSNK1D-219ENST00000581660 ATG12O94817 140 aa9.54□□□□□ -0.88
CSNK1D-219ENST00000581660 FAUP35544 74 aaKnown RBP9.54□□□□□ -0.88
CSNK1D-219ENST00000581660 PSG9Q00887 426 aa9.54□□□□□ -0.88
CSNK1D-219ENST00000581660 TRIM16LQ309B1 348 aa9.54□□□□□ -0.88
CSNK1D-219ENST00000581660 TIGITQ495A1 244 aa9.54□□□□□ -0.88
CSNK1D-219ENST00000581660 SPANXN2Q5MJ10 180 aa9.54□□□□□ -0.88
CSNK1D-219ENST00000581660 SIGLEC15Q6ZMC9 328 aa9.54□□□□□ -0.88
CSNK1D-219ENST00000581660 LINC00299Q6ZSB3 139 aa9.54□□□□□ -0.88
CSNK1D-219ENST00000581660 OR13C8Q8NGS7 320 aa9.54□□□□□ -0.88
CSNK1D-219ENST00000581660 LHFPL5Q8TAF8 219 aa9.54□□□□□ -0.88
CSNK1D-219ENST00000581660 MARCH1Q8TCQ1 289 aa9.54□□□□□ -0.88
CSNK1D-219ENST00000581660 MAGT1Q9H0U3 335 aa9.54□□□□□ -0.88
CSNK1D-219ENST00000581660 MIXL1Q9H2W2 232 aa9.54□□□□□ -0.88
CSNK1D-219ENST00000581660 PLA2G2DQ9UNK4 145 aa9.54□□□□□ -0.88
CSNK1D-219ENST00000581660 MRPS16Q9Y3D3 137 aaKnown RBP9.54□□□□□ -0.88
CSNK1D-219ENST00000581660 CBY3A6NI87 242 aa9.53□□□□□ -0.88
CSNK1D-219ENST00000581660 DISC1C4P0D8 188 aa9.53□□□□□ -0.88
CSNK1D-219ENST00000581660 BUB3O43684 328 aa9.53□□□□□ -0.88
CSNK1D-219ENST00000581660 TSPOP30536 169 aa9.53□□□□□ -0.88
CSNK1D-219ENST00000581660 TNFSF8P32971 234 aa9.53□□□□□ -0.88
CSNK1D-219ENST00000581660 OPRK1P41145 380 aa9.53□□□□□ -0.88
CSNK1D-219ENST00000581660 PAX9P55771 341 aa9.53□□□□□ -0.88
CSNK1D-219ENST00000581660 SURF2Q15527 256 aaPredicted RBP9.53□□□□□ -0.88
CSNK1D-219ENST00000581660 SCGB2B2Q4G0G5 96 aa9.53□□□□□ -0.88
CSNK1D-219ENST00000581660 OR4B1Q8NGF8 309 aa9.53□□□□□ -0.88
CSNK1D-219ENST00000581660 OR4C16Q8NGL9 310 aa9.53□□□□□ -0.88
CSNK1D-219ENST00000581660 TERB2Q8NHR7 220 aa9.53□□□□□ -0.88
CSNK1D-219ENST00000581660 PRRT1Q99946 306 aa9.53□□□□□ -0.88
CSNK1D-219ENST00000581660 SOSTQ9BQB4 213 aa9.53□□□□□ -0.88
CSNK1D-219ENST00000581660 TRAV30A0A087WSZ9 112 aa9.52□□□□□ -0.89
CSNK1D-219ENST00000581660 PLAC8L1A1L4L8 177 aa9.52□□□□□ -0.89
CSNK1D-219ENST00000581660 A8MTW9 85 aa9.52□□□□□ -0.89
CSNK1D-219ENST00000581660 NXPH3O95157 252 aa9.52□□□□□ -0.89
CSNK1D-219ENST00000581660 RAB3DO95716 219 aa9.52□□□□□ -0.89
CSNK1D-219ENST00000581660 AKAIN1P0CW23 69 aa9.52□□□□□ -0.89
CSNK1D-219ENST00000581660 STEAP1BQ6NZ63 245 aa9.52□□□□□ -0.89
CSNK1D-219ENST00000581660 IGF2BP2-AS1Q96M15 143 aa9.52□□□□□ -0.89
CSNK1D-219ENST00000581660 PDCD10Q9BUL8 212 aa9.52□□□□□ -0.89
CSNK1D-219ENST00000581660 PRR13Q9NZ81 148 aa9.52□□□□□ -0.89
CSNK1D-219ENST00000581660 COPZ2Q9P299 210 aa9.52□□□□□ -0.89
CSNK1D-219ENST00000581660 SCP2D1Q9UJQ7 156 aa9.52□□□□□ -0.89
CSNK1D-219ENST00000581660 OR5AC1P0C628 307 aa9.51□□□□□ -0.89
CSNK1D-219ENST00000581660 IGLC1P0CG04 106 aa9.51□□□□□ -0.89
CSNK1D-219ENST00000581660 UCP1P25874 307 aa9.51□□□□□ -0.89
CSNK1D-219ENST00000581660 PSMB3P49720 205 aa9.51□□□□□ -0.89
CSNK1D-219ENST00000581660 YPEL3P61236 119 aaPredicted RBP9.51□□□□□ -0.89
CSNK1D-219ENST00000581660 ESRGQ1W209 222 aa9.51□□□□□ -0.89
CSNK1D-219ENST00000581660 BSXQ3C1V8 233 aa9.51□□□□□ -0.89
CSNK1D-219ENST00000581660 FAM78BQ5VT40 261 aa9.51□□□□□ -0.89
CSNK1D-219ENST00000581660 CCDC71LQ8N9Z2 235 aa9.51□□□□□ -0.89
CSNK1D-219ENST00000581660 RNASE11Q8TAA1 199 aaKnown RBP9.51□□□□□ -0.89
CSNK1D-219ENST00000581660 Q8WTZ3 238 aa9.51□□□□□ -0.89
CSNK1D-219ENST00000581660 UHRF2Q96PU4 802 aa9.51□□□□□ -0.89
CSNK1D-219ENST00000581660 TMEM208Q9BTX3 173 aa9.51□□□□□ -0.89
CSNK1D-219ENST00000581660 CACFD1Q9UGQ2 172 aa9.51□□□□□ -0.89
CSNK1D-219ENST00000581660 SOCS3O14543 225 aa9.5□□□□□ -0.89
CSNK1D-219ENST00000581660 GCSHP23434 173 aa9.5□□□□□ -0.89
CSNK1D-219ENST00000581660 SUB1P53999 127 aaKnown RBP eCLIP9.5□□□□□ -0.89
CSNK1D-219ENST00000581660 OR1S2Q8NGQ3 325 aa9.5□□□□□ -0.89
CSNK1D-219ENST00000581660 TMEM170AQ8WVE7 144 aa9.5□□□□□ -0.89
CSNK1D-219ENST00000581660 GPR146Q96CH1 333 aa9.5□□□□□ -0.89
CSNK1D-219ENST00000581660 LINC00052Q96N35 136 aa9.5□□□□□ -0.89
CSNK1D-219ENST00000581660 RTBDNQ9BSG5 229 aaPredicted RBP9.5□□□□□ -0.89
CSNK1D-219ENST00000581660 TMEM70Q9BUB7 260 aa9.5□□□□□ -0.89
CSNK1D-219ENST00000581660 WDR12Q9GZL7 423 aaKnown RBP9.5□□□□□ -0.89
CSNK1D-219ENST00000581660 ENY2Q9NPA8 101 aa9.5□□□□□ -0.89
CSNK1D-219ENST00000581660 BATF3Q9NR55 127 aa9.5□□□□□ -0.89
CSNK1D-219ENST00000581660 A0A087WTM6 91 aa9.49□□□□□ -0.89
CSNK1D-219ENST00000581660 A0A0J9YX75 114 aa9.49□□□□□ -0.89
CSNK1D-219ENST00000581660 ANKRD20A5PA0PJZ0 165 aa9.49□□□□□ -0.89
CSNK1D-219ENST00000581660 ZNF705GA8MUZ8 300 aaPredicted RBP9.49□□□□□ -0.89
CSNK1D-219ENST00000581660 PRM2P04554 102 aa9.49□□□□□ -0.89
CSNK1D-219ENST00000581660 ID1P41134 155 aa9.49□□□□□ -0.89
CSNK1D-219ENST00000581660 RND2P52198 227 aa9.49□□□□□ -0.89
CSNK1D-219ENST00000581660 HAMPP81172 84 aa9.49□□□□□ -0.89
CSNK1D-219ENST00000581660 DHODHQ02127 395 aa9.49□□□□□ -0.89
CSNK1D-219ENST00000581660 CNPY1Q3B7I2 92 aa9.49□□□□□ -0.89
CSNK1D-219ENST00000581660 PRSS54Q6PEW0 395 aa9.49□□□□□ -0.89
CSNK1D-219ENST00000581660 AMTNQ6UX39 209 aa9.49□□□□□ -0.89
CSNK1D-219ENST00000581660 CCDC190Q86UF4 302 aa9.49□□□□□ -0.89
CSNK1D-219ENST00000581660 SELENOHQ8IZQ5 122 aaKnown RBP9.49□□□□□ -0.89
CSNK1D-219ENST00000581660 RXFP4Q8TDU9 374 aa9.49□□□□□ -0.89
CSNK1D-219ENST00000581660 GLYATL2Q8WU03 294 aa9.49□□□□□ -0.89
CSNK1D-219ENST00000581660 GNPNAT1Q96EK6 184 aaPredicted RBP9.49□□□□□ -0.89
CSNK1D-219ENST00000581660 RRNAD1Q96FB5 475 aaKnown RBP9.49□□□□□ -0.89
CSNK1D-219ENST00000581660 TMEM222Q9H0R3 208 aa9.49□□□□□ -0.89
CSNK1D-219ENST00000581660 CACNG5Q9UF02 275 aa9.49□□□□□ -0.89
CSNK1D-219ENST00000581660 CDS2O95674 445 aa9.48□□□□□ -0.89
CSNK1D-219ENST00000581660 IL4P05112 153 aa9.48□□□□□ -0.89
CSNK1D-219ENST00000581660 DNAH10OSP0CZ25 163 aa9.48□□□□□ -0.89
CSNK1D-219ENST00000581660 B2MP61769 119 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms