RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, human

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TVP23C-208	ENST00000581273	F2RL2	O00254	374 aa		6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	SPINT2	O43291	252 aa		6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	SPINK4	O60575	86 aa		6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	NGF	P01138	241 aa		6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	B4GALT1	P15291	398 aa		6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	MC5R	P33032	325 aa		6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	DUT	P33316	252 aa	Known RBP	6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	VDAC2	P45880	294 aa	Predicted RBP	6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	RPL24	P83731	157 aa	Known RBP	6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	CEACAM16	Q2WEN9	425 aa		6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	TMEM95	Q3KNT9	176 aa		6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	WIPI1	Q5MNZ9	446 aa	Predicted RBP	6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	RPRML	Q8N4K4	120 aa		6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	TPRX1	Q8N7U7	411 aa		6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	NUP35	Q8NFH5	326 aa		6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	FAM57A	Q8TBR7	257 aa		6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	RND1	Q92730	232 aa		6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	NEUROG1	Q92886	237 aa		6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	SARAF	Q96BY9	339 aa		6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	DAZAP1	Q96EP5	407 aa	Known RBP	6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	SPATA25	Q9BR10	227 aa		6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	RNASE7	Q9H1E1	156 aa	Known RBP	6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	DEFB127	Q9H1M4	99 aa		6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	FNDC4	Q9H6D8	234 aa	Predicted RBP	6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	IDI2-AS1	Q9NZ38	188 aa		6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	ANK3	Q12955	4377 aa	Known RBP	6.1	□□□□□ -1.43
TVP23C-208	ENST00000581273	SON	P18583	2426 aa	Known RBP	6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273		A0A087X0K7	114 aa		6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	hDV102S1	A0JD36	115 aa		6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	OR11H12	B2RN74	326 aa		6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	PPIAL4D	F5H284	164 aa		6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	RRH	O14718	337 aa		6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	SMAD7	O15105	426 aa	Known RBP	6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	OR2H2	O95918	312 aa		6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	CELA3B	P08861	270 aa		6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	IGFBP2	P18065	325 aa		6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	CYB561	P49447	251 aa		6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	RPL8	P62917	257 aa	Known RBP	6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	AES	Q08117	197 aa		6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	RIG	Q13278	110 aa		6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	FXYD3	Q14802	87 aa		6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	KIR3DS1	Q14943	382 aa		6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	ZNF146	Q15072	292 aa		6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	LGALS9B	Q3B8N2	356 aa		6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	GCSAML	Q5JQS6	135 aa		6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	LGALS9C	Q6DKI2	356 aa		6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	OR11H1	Q8NG94	326 aa		6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	OR11H2	Q8NH07	326 aa		6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	PPP1R35	Q8TAP8	253 aa		6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	PIFO	Q8TCI5	191 aa		6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	POM121L2	Q96KW2	1035 aa		6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	NABP2	Q9BQ15	211 aa		6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	RPP21	Q9H633	154 aa	Known RBP	6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	HIGD1B	Q9P298	99 aa		6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	CHD3	Q12873	2000 aa	Known RBP	6.09	□□□□□ -1.43
TVP23C-208	ENST00000581273	PCNX3	Q9H6A9	2034 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	PPIAL4C	A0A0B4J2A2	164 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273		A0A1W2PR80	420 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	hADV38S2	A0JD32	116 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	C17orf98	A8MV24	154 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	PRSS46	E5RG02	174 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273		H0Y8G0	127 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	PEX7	O00628	323 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	SYNGR1	O43759	233 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	SS18L1	O75177	396 aa	Predicted RBP	6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	IGLV2-8	P01709	118 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	PPIAL4G	P0DN37	164 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	GATA2	P23769	480 aa	Predicted RBP	6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	NTF4	P34130	210 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	RAB9A	P51151	201 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	ERVK11-1	P61568	191 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	HSPE1	P61604	102 aa	Known RBP	6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	MZT1	Q08AG7	82 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	TAL2	Q16559	108 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	C5orf64	Q2M2E5	130 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	FAM120AOS	Q5T036	256 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273		Q6AWC8	147 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	RBPMS2	Q6ZRY4	209 aa	Known RBP	6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	SSX8	Q7RTT4	187 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	BOD1L2	Q8IYS8	172 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	TEX45	Q8NA69	505 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	WFDC11	Q8NEX6	87 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	OR4A5	Q8NH83	315 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	ZNF502	Q8TBZ5	544 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	FAM222B	Q8WU58	562 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	CACNG8	Q8WXS5	425 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	TMEM158	Q8WZ71	300 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	ST6GALNAC6	Q969X2	333 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	S1PR3	Q99500	378 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	AP5S1	Q9NUS5	200 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	MRPL16	Q9NX20	251 aa	Known RBP	6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	CLEC5A	Q9NY25	188 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	CRIM1	Q9NZV1	1036 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	PRND	Q9UKY0	176 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	TCF19	Q9Y242	345 aa		6.08	□□□□□ -1.44
TVP23C-208	ENST00000581273	FOXA2	Q9Y261	457 aa	Predicted RBP	6.08	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms