RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 VWCEQ96DN2 955 aa11.93□□□□□ -0.5
CSNK1D-217ENST00000581241 MYO9BQ13459 2157 aa11.93□□□□□ -0.5
CSNK1D-217ENST00000581241 CDKN1AP38936 164 aa11.93□□□□□ -0.5
CSNK1D-217ENST00000581241 LYPD1Q8N2G4 141 aa11.93□□□□□ -0.5
CSNK1D-217ENST00000581241 TRAV41A0A0B4J266 112 aa11.92□□□□□ -0.5
CSNK1D-217ENST00000581241 ZNF138P52744 262 aa11.92□□□□□ -0.5
CSNK1D-217ENST00000581241 FNDC10F2Z333 226 aa11.92□□□□□ -0.5
CSNK1D-217ENST00000581241 VCYO14598 125 aa11.92□□□□□ -0.5
CSNK1D-217ENST00000581241 SPINK8P0C7L1 97 aa11.92□□□□□ -0.5
CSNK1D-217ENST00000581241 RCHY1Q96PM5 261 aa11.92□□□□□ -0.5
CSNK1D-217ENST00000581241 EDA2RQ9HAV5 297 aa11.92□□□□□ -0.5
CSNK1D-217ENST00000581241 IGHV1-3A0A0C4DH29 117 aa11.92□□□□□ -0.5
CSNK1D-217ENST00000581241 RNF5Q99942 180 aa11.92□□□□□ -0.5
CSNK1D-217ENST00000581241 EFNA2O43921 213 aa11.92□□□□□ -0.5
CSNK1D-217ENST00000581241 SRD5A1P18405 259 aa11.92□□□□□ -0.5
CSNK1D-217ENST00000581241 Q6ZS49 121 aa11.92□□□□□ -0.5
CSNK1D-217ENST00000581241 H0YJW9 148 aa11.91□□□□□ -0.5
CSNK1D-217ENST00000581241 WNT2P09544 360 aa11.91□□□□□ -0.5
CSNK1D-217ENST00000581241 LSM4Q9Y4Z0 139 aaKnown RBP11.91□□□□□ -0.5
CSNK1D-217ENST00000581241 SRRM5B3KS81 715 aa11.91□□□□□ -0.5
CSNK1D-217ENST00000581241 MST1LQ2TV78 715 aa11.91□□□□□ -0.5
CSNK1D-217ENST00000581241 Q6P435 159 aa11.91□□□□□ -0.5
CSNK1D-217ENST00000581241 ZNF474Q6S9Z5 364 aaPredicted RBP11.91□□□□□ -0.5
CSNK1D-217ENST00000581241 DTX2Q86UW9 622 aa11.91□□□□□ -0.5
CSNK1D-217ENST00000581241 CSTL1Q9H114 145 aa11.91□□□□□ -0.5
CSNK1D-217ENST00000581241 IGHV1-8P0DP01 117 aa11.91□□□□□ -0.5
CSNK1D-217ENST00000581241 C10orf55Q5SWW7 151 aa11.91□□□□□ -0.5
CSNK1D-217ENST00000581241 LCTP09848 1927 aa11.91□□□□□ -0.5
CSNK1D-217ENST00000581241 VMO1Q7Z5L0 202 aa11.91□□□□□ -0.5
CSNK1D-217ENST00000581241 PRADC1Q9BSG0 188 aa11.91□□□□□ -0.5
CSNK1D-217ENST00000581241 C15orf62A8K5M9 175 aa11.9□□□□□ -0.5
CSNK1D-217ENST00000581241 ITGB1BP1O14713 200 aa11.9□□□□□ -0.5
CSNK1D-217ENST00000581241 CD33P20138 364 aa11.9□□□□□ -0.5
CSNK1D-217ENST00000581241 CSRP2Q16527 193 aa11.9□□□□□ -0.5
CSNK1D-217ENST00000581241 CHCHD5Q9BSY4 110 aa11.9□□□□□ -0.5
CSNK1D-217ENST00000581241 TRBV7-1A0A0A6YYK4 115 aa11.9□□□□□ -0.5
CSNK1D-217ENST00000581241 Q86TA4 180 aa11.9□□□□□ -0.5
CSNK1D-217ENST00000581241 ABHD17AQ96GS6 310 aa11.9□□□□□ -0.5
CSNK1D-217ENST00000581241 LINC00477Q96M19 166 aa11.9□□□□□ -0.5
CSNK1D-217ENST00000581241 C20orf144Q9BQM9 153 aa11.9□□□□□ -0.5
CSNK1D-217ENST00000581241 ATG2BQ96BY7 2078 aa11.9□□□□□ -0.5
CSNK1D-217ENST00000581241 LEPROTO15243 131 aa11.9□□□□□ -0.51
CSNK1D-217ENST00000581241 ZNF876PQ49A33 203 aa11.9□□□□□ -0.51
CSNK1D-217ENST00000581241 CST9LQ9H4G1 147 aa11.9□□□□□ -0.51
CSNK1D-217ENST00000581241 CFHR1Q03591 330 aa11.89□□□□□ -0.51
CSNK1D-217ENST00000581241 SPSB3Q6PJ21 355 aa11.89□□□□□ -0.51
CSNK1D-217ENST00000581241 PSPNO60542 156 aa11.89□□□□□ -0.51
CSNK1D-217ENST00000581241 C15orf32Q32M92 178 aa11.89□□□□□ -0.51
CSNK1D-217ENST00000581241 LINC00473A8K010 186 aa11.89□□□□□ -0.51
CSNK1D-217ENST00000581241 ZNF415Q09FC8 603 aa11.89□□□□□ -0.51
CSNK1D-217ENST00000581241 IGHV3-73A0A0B4J1V6 119 aa11.89□□□□□ -0.51
CSNK1D-217ENST00000581241 C9orf139Q6ZV77 190 aa11.89□□□□□ -0.51
CSNK1D-217ENST00000581241 SMKR1H3BMG3 65 aa11.88□□□□□ -0.51
CSNK1D-217ENST00000581241 C1orf122Q6ZSJ8 110 aa11.88□□□□□ -0.51
CSNK1D-217ENST00000581241 LYNX1G3V0Z9 82 aa11.88□□□□□ -0.51
CSNK1D-217ENST00000581241 LYNX1P0DP58 116 aa11.88□□□□□ -0.51
CSNK1D-217ENST00000581241 DTX1Q86Y01 620 aa11.88□□□□□ -0.51
CSNK1D-217ENST00000581241 MAJINQ3KP22 176 aa11.88□□□□□ -0.51
CSNK1D-217ENST00000581241 GAFA1Q96PS6 74 aa11.88□□□□□ -0.51
CSNK1D-217ENST00000581241 XIRP1Q702N8 1843 aaKnown RBP11.88□□□□□ -0.51
CSNK1D-217ENST00000581241 TRAV8-3A0A0A6YYJ7 113 aa11.87□□□□□ -0.51
CSNK1D-217ENST00000581241 MYMXA0A1B0GTQ4 84 aa11.87□□□□□ -0.51
CSNK1D-217ENST00000581241 RNF144BQ7Z419 303 aa11.87□□□□□ -0.51
CSNK1D-217ENST00000581241 ZCCHC24Q8N2G6 241 aaKnown RBP11.87□□□□□ -0.51
CSNK1D-217ENST00000581241 TMEM75Q8N9X5 138 aa11.87□□□□□ -0.51
CSNK1D-217ENST00000581241 METRNQ9UJH8 293 aa11.87□□□□□ -0.51
CSNK1D-217ENST00000581241 PAX4O43316 350 aa11.87□□□□□ -0.51
CSNK1D-217ENST00000581241 CMC4P56277 68 aaPredicted RBP11.87□□□□□ -0.51
CSNK1D-217ENST00000581241 LAMTOR3Q9UHA4 124 aa11.87□□□□□ -0.51
CSNK1D-217ENST00000581241 SPANXA1Q9NS26 97 aa11.87□□□□□ -0.51
CSNK1D-217ENST00000581241 ZNF492Q9P255 531 aa11.87□□□□□ -0.51
CSNK1D-217ENST00000581241 SCN2AQ99250 2005 aa11.87□□□□□ -0.51
CSNK1D-217ENST00000581241 AMN1Q8IY45 258 aa11.87□□□□□ -0.51
CSNK1D-217ENST00000581241 Q8TAT8 98 aa11.87□□□□□ -0.51
CSNK1D-217ENST00000581241 GON4LQ3T8J9 2241 aa11.87□□□□□ -0.51
CSNK1D-217ENST00000581241 A0A0G2JRQ6 117 aa11.87□□□□□ -0.51
CSNK1D-217ENST00000581241 TIMM21Q9BVV7 248 aa11.87□□□□□ -0.51
CSNK1D-217ENST00000581241 PLSCR4Q9NRQ2 329 aa11.87□□□□□ -0.51
CSNK1D-217ENST00000581241 C5orf63A6NC05 138 aa11.86□□□□□ -0.51
CSNK1D-217ENST00000581241 TMEM178BH3BS89 294 aa11.86□□□□□ -0.51
CSNK1D-217ENST00000581241 MINOS1Q5TGZ0 78 aa11.86□□□□□ -0.51
CSNK1D-217ENST00000581241 JPT2Q9H910 190 aa11.86□□□□□ -0.51
CSNK1D-217ENST00000581241 MINOS1-NBL1R4GNA1 71 aa11.86□□□□□ -0.51
CSNK1D-217ENST00000581241 VWC2LB2RUY7 222 aa11.86□□□□□ -0.51
CSNK1D-217ENST00000581241 CFPP27918 469 aa11.86□□□□□ -0.51
CSNK1D-217ENST00000581241 C5orf24Q7Z6I8 188 aa11.86□□□□□ -0.51
CSNK1D-217ENST00000581241 VGLL1Q99990 258 aa11.86□□□□□ -0.51
CSNK1D-217ENST00000581241 FAM231BA6NCW3 169 aa11.86□□□□□ -0.51
CSNK1D-217ENST00000581241 ERCC8Q13216 396 aa11.86□□□□□ -0.51
CSNK1D-217ENST00000581241 TMEM249Q2WGJ8 235 aa11.86□□□□□ -0.51
CSNK1D-217ENST00000581241 ZC2HC1BQ5TFG8 222 aa11.86□□□□□ -0.51
CSNK1D-217ENST00000581241 SCN10AQ9Y5Y9 1956 aa11.86□□□□□ -0.51
CSNK1D-217ENST00000581241 MCRIP2Q9BUT9 160 aaKnown RBP11.86□□□□□ -0.51
CSNK1D-217ENST00000581241 ZFP36L1Q07352 338 aaKnown RBP11.86□□□□□ -0.51
CSNK1D-217ENST00000581241 GAGE2AQ6NT46 116 aa11.86□□□□□ -0.51
CSNK1D-217ENST00000581241 SELENOKQ9Y6D0 94 aa11.86□□□□□ -0.51
CSNK1D-217ENST00000581241 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.85□□□□□ -0.51
CSNK1D-217ENST00000581241 C9JAW5 83 aa11.85□□□□□ -0.51
CSNK1D-217ENST00000581241 RNASE2P10153 161 aaKnown RBP11.85□□□□□ -0.51
CSNK1D-217ENST00000581241 DNAJC30Q96LL9 226 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms