RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-215	ENST00000579780	LGALS9	O00182	355 aa		12.81	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	RHOB	P62745	196 aa		12.81	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	HIST2H2BD	Q6DRA6	164 aa		12.81	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	FAM122C	Q6P4D5	195 aa		12.81	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	UNQ9165/PRO28630	Q6UXU0	137 aa		12.81	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	PATE2	Q6UY27	113 aa		12.81	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	C1QL4	Q86Z23	238 aa		12.81	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	RPP25L	Q8N5L8	163 aa	Known RBP	12.81	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	RAX2	Q96IS3	184 aa		12.81	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	DNAJC4	Q9NNZ3	241 aa		12.81	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	RABAC1	Q9UI14	185 aa		12.81	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	CTXND1	A0A1B0GTU2	59 aa		12.8	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780		H3BRN7	92 aa		12.8	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	FAM213B	Q8TBF2	198 aa		12.8	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	SAT2	Q96F10	170 aa	Predicted RBP	12.8	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	METTL26	Q96S19	204 aa		12.8	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	ACTR3C	Q9C0K3	210 aa	Predicted RBP	12.8	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	SLC25A22	Q9H936	323 aa		12.8	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	RNF24	Q9Y225	148 aa		12.8	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	FUT9	Q9Y231	359 aa		12.8	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780		A0A1W2PPV4	95 aa		12.79	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	ZNF705E	A8MWA4	302 aa	Predicted RBP	12.79	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780		K7EMT4	169 aa		12.79	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	CCL24	O00175	119 aa		12.79	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	FHIT	P49789	147 aa		12.79	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	SLURP1	P55000	103 aa		12.79	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	KLF5	Q13887	457 aa	Predicted RBP	12.79	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	ZNF726P1	Q15940	193 aa		12.79	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	NSUN5P1	Q3KNT7	163 aa		12.79	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	FAM78B	Q5VT40	261 aa		12.79	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	LINC00305	Q7Z4B0	112 aa		12.79	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	UHRF2	Q96PU4	802 aa		12.79	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	SHANK2-AS3	Q9BTD1	123 aa		12.79	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	C20orf24	Q9BUV8	137 aa		12.79	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	ZNF747	Q9BV97	191 aa		12.79	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	12.79	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	DAZ1	Q9NQZ3	744 aa	Known RBP	12.79	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	PFDN2	Q9UHV9	154 aa		12.79	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	UFC1	Q9Y3C8	167 aa		12.79	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	CRYBB3	P26998	211 aa		12.78	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	MYCNOS	P40205	109 aa		12.78	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	BLOC1S1	P78537	153 aa		12.78	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	MIR17HG	Q75NE6	70 aa		12.78	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	SEPSECS	Q9HD40	501 aa	Known RBP	12.78	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	TECR	Q9NZ01	308 aa	Known RBP	12.78	□□□□□ -0.36
CDK5RAP3-215	ENST00000579780	IGHV3OR16-8	A0A075B7F1	116 aa		12.77	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	MAP1LC3B2	A6NCE7	125 aa		12.77	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	NMB	P08949	121 aa		12.77	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	SYNJ2BP	P57105	145 aa		12.77	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	TAS2R45	P59539	299 aa		12.77	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	KHDC3L	Q587J8	217 aa		12.77	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	SPATA31B1P	Q5VZV4	182 aa		12.77	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	SSX7	Q7RTT5	188 aa		12.77	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	RAB24	Q969Q5	203 aa		12.77	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	NARS2	Q96I59	477 aa	Known RBP	12.77	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	DUX3	Q96PT4	197 aa		12.77	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	SCRT1	Q9BWW7	348 aa		12.77	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	MAP1LC3B	Q9GZQ8	125 aa		12.77	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780		U3KQE9	123 aa		12.77	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	ZNF320	A2RRD8	509 aa		12.76	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	TMEM213	A2RRL7	107 aa		12.76	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	STAG3L2	P0CL84	134 aa		12.76	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	STAG3L3	P0CL85	134 aa		12.76	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	C8orf88	P0DMB2	117 aa		12.76	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	NPPC	P23582	126 aa		12.76	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	CLLU1	Q5K131	121 aa		12.76	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	MORN5	Q5VZ52	161 aa		12.76	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	C12orf54	Q6X4T0	127 aa		12.76	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	OR4F17	Q8NGA8	305 aa		12.76	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	MBD3L1	Q8WWY6	194 aa		12.76	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	OR4F4	Q96R69	305 aa		12.76	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	PEMT	Q9UBM1	199 aa		12.76	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	FBN1	P35555	2871 aa	Known RBP	12.76	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	TRAV1-1	A0A0B4J248	108 aa		12.75	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	IGHV7-4-1	A0A0J9YVY3	117 aa		12.75	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	ZNF98	A6NK75	572 aa		12.75	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	HBE1	P02100	147 aa		12.75	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	H2AFB1	P0C5Y9	115 aa		12.75	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	BMI1	P35226	326 aa		12.75	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	RAB14	P61106	215 aa		12.75	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	PQLC2	Q6ZP29	291 aa		12.75	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	MARC2	Q969Z3	335 aa		12.75	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	SLC25A2	Q9BXI2	301 aa		12.75	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780		A0A1W2PS18	150 aa		12.74	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	TEX46	H3BTG2	121 aa		12.74	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	ZNF207	O43670	478 aa	Known RBP	12.74	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	BUB3	O43684	328 aa		12.74	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	C1orf194	Q5T5A4	169 aa		12.74	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	SHISA2	Q6UWI4	295 aa		12.74	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	C3orf56	Q8N813	242 aa		12.74	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	STXBP6	Q8NFX7	210 aa		12.74	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	OR9G4	Q8NGQ1	327 aa		12.74	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	LYPD6B	Q8NI32	183 aa		12.74	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	DLX4	Q92988	240 aa	Predicted RBP	12.74	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	GRAMD2B	Q96HH9	432 aa		12.74	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	FAM167A-AS1	Q96KT0	104 aa		12.74	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	TMEM231	Q9H6L2	316 aa		12.74	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	TENM1	Q9UKZ4	2725 aa		12.73	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	CXorf1	O96002	111 aa		12.73	□□□□□ -0.37
CDK5RAP3-215	ENST00000579780	PF4	P02776	101 aa		12.73	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms