RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 RAP2BP61225 183 aa9.5□□□□□ -0.89
CDK5RAP3-203ENST00000577442 EWSR1Q01844 656 aaKnown RBP eCLIP9.5□□□□□ -0.89
CDK5RAP3-203ENST00000577442 FCN2Q15485 313 aa9.5□□□□□ -0.89
CDK5RAP3-203ENST00000577442 C1orf194Q5T5A4 169 aa9.5□□□□□ -0.89
CDK5RAP3-203ENST00000577442 PXDC1Q5TGL8 231 aa9.5□□□□□ -0.89
CDK5RAP3-203ENST00000577442 SIGLEC15Q6ZMC9 328 aa9.5□□□□□ -0.89
CDK5RAP3-203ENST00000577442 DEFB125Q8N687 156 aa9.5□□□□□ -0.89
CDK5RAP3-203ENST00000577442 STXBP6Q8NFX7 210 aa9.5□□□□□ -0.89
CDK5RAP3-203ENST00000577442 MS4A6AQ9H2W1 248 aa9.5□□□□□ -0.89
CDK5RAP3-203ENST00000577442 SRD5A3Q9H8P0 318 aa9.5□□□□□ -0.89
CDK5RAP3-203ENST00000577442 UBE2L5PA0A1B0GUS4 154 aa9.49□□□□□ -0.89
CDK5RAP3-203ENST00000577442 AGPAT2O15120 278 aa9.49□□□□□ -0.89
CDK5RAP3-203ENST00000577442 ORM2P19652 201 aa9.49□□□□□ -0.89
CDK5RAP3-203ENST00000577442 CXCL3P19876 107 aa9.49□□□□□ -0.89
CDK5RAP3-203ENST00000577442 GATA2P23769 480 aaPredicted RBP9.49□□□□□ -0.89
CDK5RAP3-203ENST00000577442 VWC2Q2TAL6 325 aa9.49□□□□□ -0.89
CDK5RAP3-203ENST00000577442 ODF3L2Q3SX64 289 aa9.49□□□□□ -0.89
CDK5RAP3-203ENST00000577442 GBGT1Q8N5D6 347 aa9.49□□□□□ -0.89
CDK5RAP3-203ENST00000577442 OR1B1Q8NGR6 318 aa9.49□□□□□ -0.89
CDK5RAP3-203ENST00000577442 THAP6Q8TBB0 222 aa9.49□□□□□ -0.89
CDK5RAP3-203ENST00000577442 MBD2Q9UBB5 411 aa9.49□□□□□ -0.89
CDK5RAP3-203ENST00000577442 RNF24Q9Y225 148 aa9.49□□□□□ -0.89
CDK5RAP3-203ENST00000577442 HIGD1AQ9Y241 93 aa9.49□□□□□ -0.89
CDK5RAP3-203ENST00000577442 WDR83OSQ9Y284 106 aa9.49□□□□□ -0.89
CDK5RAP3-203ENST00000577442 COL7A1Q02388 2944 aa9.48□□□□□ -0.89
CDK5RAP3-203ENST00000577442 MPDU1O75352 247 aa9.48□□□□□ -0.89
CDK5RAP3-203ENST00000577442 HYPMO75409 117 aa9.48□□□□□ -0.89
CDK5RAP3-203ENST00000577442 GIPP09681 153 aaPredicted RBP9.48□□□□□ -0.89
CDK5RAP3-203ENST00000577442 CAMLGP49069 296 aa9.48□□□□□ -0.89
CDK5RAP3-203ENST00000577442 PLP1P60201 277 aa9.48□□□□□ -0.89
CDK5RAP3-203ENST00000577442 WFDC3Q8IUB2 231 aa9.48□□□□□ -0.89
CDK5RAP3-203ENST00000577442 OR8I2Q8N0Y5 310 aa9.48□□□□□ -0.89
CDK5RAP3-203ENST00000577442 OR11H7Q8NGC8 314 aa9.48□□□□□ -0.89
CDK5RAP3-203ENST00000577442 OR5C1Q8NGR4 320 aa9.48□□□□□ -0.89
CDK5RAP3-203ENST00000577442 GPR82Q96P67 336 aa9.48□□□□□ -0.89
CDK5RAP3-203ENST00000577442 WFDC10AQ9H1F0 79 aa9.48□□□□□ -0.89
CDK5RAP3-203ENST00000577442 NRN1Q9NPD7 142 aa9.48□□□□□ -0.89
CDK5RAP3-203ENST00000577442 UBQLN2Q9UHD9 624 aa9.48□□□□□ -0.89
CDK5RAP3-203ENST00000577442 NBEAL2Q6ZNJ1 2754 aa9.47□□□□□ -0.89
CDK5RAP3-203ENST00000577442 OR5G3P0C626 314 aa9.47□□□□□ -0.89
CDK5RAP3-203ENST00000577442 FGF7P21781 194 aa9.47□□□□□ -0.89
CDK5RAP3-203ENST00000577442 GALR1P47211 349 aa9.47□□□□□ -0.89
CDK5RAP3-203ENST00000577442 FGL1Q08830 312 aa9.47□□□□□ -0.89
CDK5RAP3-203ENST00000577442 SAMD13Q5VXD3 122 aa9.47□□□□□ -0.89
CDK5RAP3-203ENST00000577442 TMEM182Q6ZP80 229 aaPredicted RBP9.47□□□□□ -0.89
CDK5RAP3-203ENST00000577442 MGST2Q99735 147 aa9.47□□□□□ -0.89
CDK5RAP3-203ENST00000577442 ASCL2Q99929 193 aa9.47□□□□□ -0.89
CDK5RAP3-203ENST00000577442 RNF126Q9BV68 326 aa9.47□□□□□ -0.89
CDK5RAP3-203ENST00000577442 MAP6D1Q9H9H5 199 aa9.47□□□□□ -0.89
CDK5RAP3-203ENST00000577442 SEPSECSQ9HD40 501 aaKnown RBP9.47□□□□□ -0.89
CDK5RAP3-203ENST00000577442 KCNIP2Q9NS61 270 aa9.47□□□□□ -0.89
CDK5RAP3-203ENST00000577442 DOK5Q9P104 306 aa9.47□□□□□ -0.89
CDK5RAP3-203ENST00000577442 HUWE1Q7Z6Z7 4374 aaKnown RBP9.47□□□□□ -0.89
CDK5RAP3-203ENST00000577442 TENM3Q9P273 2699 aa9.47□□□□□ -0.89
CDK5RAP3-203ENST00000577442 ZNF98A6NK75 572 aa9.46□□□□□ -0.9
CDK5RAP3-203ENST00000577442 H3BRN7 92 aa9.46□□□□□ -0.9
CDK5RAP3-203ENST00000577442 K7EQG2 157 aa9.46□□□□□ -0.9
CDK5RAP3-203ENST00000577442 COX7A2P2O60397 106 aa9.46□□□□□ -0.9
CDK5RAP3-203ENST00000577442 LYL1P12980 280 aa9.46□□□□□ -0.9
CDK5RAP3-203ENST00000577442 RPL12P30050 165 aaKnown RBP9.46□□□□□ -0.9
CDK5RAP3-203ENST00000577442 MEOX2P50222 304 aa9.46□□□□□ -0.9
CDK5RAP3-203ENST00000577442 SNRPD3P62318 126 aaKnown RBP9.46□□□□□ -0.9
CDK5RAP3-203ENST00000577442 NHLH2Q02577 135 aa9.46□□□□□ -0.9
CDK5RAP3-203ENST00000577442 CLINT1Q14677 625 aa9.46□□□□□ -0.9
CDK5RAP3-203ENST00000577442 OPCMLQ14982 345 aa9.46□□□□□ -0.9
CDK5RAP3-203ENST00000577442 Q6ZRG5 221 aa9.46□□□□□ -0.9
CDK5RAP3-203ENST00000577442 STPG3Q8N7X2 389 aa9.46□□□□□ -0.9
CDK5RAP3-203ENST00000577442 DCANP1Q8TF63 244 aa9.46□□□□□ -0.9
CDK5RAP3-203ENST00000577442 SHANK2-AS3Q9BTD1 123 aa9.46□□□□□ -0.9
CDK5RAP3-203ENST00000577442 GGTLC1Q9BX51 225 aa9.46□□□□□ -0.9
CDK5RAP3-203ENST00000577442 SLC25A39Q9BZJ4 359 aaPredicted RBP9.46□□□□□ -0.9
CDK5RAP3-203ENST00000577442 ARL6Q9H0F7 186 aa9.46□□□□□ -0.9
CDK5RAP3-203ENST00000577442 ZMAT4Q9H898 229 aa9.46□□□□□ -0.9
CDK5RAP3-203ENST00000577442 HSPB11Q9Y547 144 aa9.46□□□□□ -0.9
CDK5RAP3-203ENST00000577442 ELOA3CA0A087WX78 387 aaPredicted RBP9.45□□□□□ -0.9
CDK5RAP3-203ENST00000577442 LOC102724200A0A096LPH7 203 aaPredicted RBP9.45□□□□□ -0.9
CDK5RAP3-203ENST00000577442 RPL7P18124 248 aaKnown RBP9.45□□□□□ -0.9
CDK5RAP3-203ENST00000577442 RPL29P47914 159 aaKnown RBP9.45□□□□□ -0.9
CDK5RAP3-203ENST00000577442 HAGHQ16775 308 aa9.45□□□□□ -0.9
CDK5RAP3-203ENST00000577442 SBSPONQ8IVN8 264 aa9.45□□□□□ -0.9
CDK5RAP3-203ENST00000577442 OR1L4Q8NGR5 311 aa9.45□□□□□ -0.9
CDK5RAP3-203ENST00000577442 CHAC2Q8WUX2 184 aa9.45□□□□□ -0.9
CDK5RAP3-203ENST00000577442 PFDN5Q99471 154 aa9.45□□□□□ -0.9
CDK5RAP3-203ENST00000577442 ATP5SQ99766 215 aa9.45□□□□□ -0.9
CDK5RAP3-203ENST00000577442 SPATA25Q9BR10 227 aa9.45□□□□□ -0.9
CDK5RAP3-203ENST00000577442 ARV1Q9H2C2 271 aa9.45□□□□□ -0.9
CDK5RAP3-203ENST00000577442 SLC25A32Q9H2D1 315 aa9.45□□□□□ -0.9
CDK5RAP3-203ENST00000577442 SLC25A22Q9H936 323 aa9.45□□□□□ -0.9
CDK5RAP3-203ENST00000577442 RBMY1BA6NDE4 496 aaKnown RBP9.44□□□□□ -0.9
CDK5RAP3-203ENST00000577442 RBMY1EA6NEQ0 496 aaKnown RBP9.44□□□□□ -0.9
CDK5RAP3-203ENST00000577442 RBMY1DP0C7P1 496 aaKnown RBP9.44□□□□□ -0.9
CDK5RAP3-203ENST00000577442 ID1P41134 155 aa9.44□□□□□ -0.9
CDK5RAP3-203ENST00000577442 APOC4P55056 127 aa9.44□□□□□ -0.9
CDK5RAP3-203ENST00000577442 DEFB131AP59861 70 aa9.44□□□□□ -0.9
CDK5RAP3-203ENST00000577442 B2MP61769 119 aa9.44□□□□□ -0.9
CDK5RAP3-203ENST00000577442 LINC00322Q6ZN03 302 aaPredicted RBP9.44□□□□□ -0.9
CDK5RAP3-203ENST00000577442 ZNF709Q8N972 641 aa9.44□□□□□ -0.9
CDK5RAP3-203ENST00000577442 TM2D3Q9BRN9 247 aa9.44□□□□□ -0.9
CDK5RAP3-203ENST00000577442 SCRT1Q9BWW7 348 aa9.44□□□□□ -0.9
CDK5RAP3-203ENST00000577442 NPCDR1Q9BY65 106 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms