RNA–Protein interactions for RNA: ENST00000568139.5

CLK3-221, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 918 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-221ENST00000568139 LGI3Q8N145 548 aa12.39□□□□□ -0.43
CLK3-221ENST00000568139 DTD1Q8TEA8 209 aa12.39□□□□□ -0.43
CLK3-221ENST00000568139 AP3S1Q92572 193 aa12.39□□□□□ -0.43
CLK3-221ENST00000568139 IL22RA2Q969J5 263 aa12.39□□□□□ -0.43
CLK3-221ENST00000568139 MAGT1Q9H0U3 335 aa12.39□□□□□ -0.43
CLK3-221ENST00000568139 HSPB7Q9UBY9 170 aa12.39□□□□□ -0.43
CLK3-221ENST00000568139 NBDYA0A0U1RRE5 68 aa12.38□□□□□ -0.43
CLK3-221ENST00000568139 SNRPGP15A8MWD9 76 aa12.38□□□□□ -0.43
CLK3-221ENST00000568139 GABARAPH6UMI1 98 aa12.38□□□□□ -0.43
CLK3-221ENST00000568139 GABARAPO95166 117 aa12.38□□□□□ -0.43
CLK3-221ENST00000568139 ZNF182P17025 639 aaPredicted RBP12.38□□□□□ -0.43
CLK3-221ENST00000568139 ATP5IP56385 69 aaPredicted RBP12.38□□□□□ -0.43
CLK3-221ENST00000568139 LYZP61626 148 aa12.38□□□□□ -0.43
CLK3-221ENST00000568139 SAMD13Q5VXD3 122 aa12.38□□□□□ -0.43
CLK3-221ENST00000568139 OR8I2Q8N0Y5 310 aa12.38□□□□□ -0.43
CLK3-221ENST00000568139 MAPKAPK5-AS1Q8N8E1 139 aa12.38□□□□□ -0.43
CLK3-221ENST00000568139 ZNRF2Q8NHG8 242 aa12.38□□□□□ -0.43
CLK3-221ENST00000568139 C20orf173Q96LM9 149 aa12.38□□□□□ -0.43
CLK3-221ENST00000568139 IGF2BP2-AS1Q96M15 143 aa12.38□□□□□ -0.43
CLK3-221ENST00000568139 ATG101Q9BSB4 218 aa12.38□□□□□ -0.43
CLK3-221ENST00000568139 RBKSQ9H477 322 aa12.38□□□□□ -0.43
CLK3-221ENST00000568139 RPRMQ9NS64 109 aa12.38□□□□□ -0.43
CLK3-221ENST00000568139 DOK5Q9P104 306 aa12.38□□□□□ -0.43
CLK3-221ENST00000568139 DISC1C4P0D8 188 aa12.37□□□□□ -0.43
CLK3-221ENST00000568139 CCR6P51684 374 aa12.37□□□□□ -0.43
CLK3-221ENST00000568139 C6orf223Q8N319 242 aa12.37□□□□□ -0.43
CLK3-221ENST00000568139 SLC35E1Q96K37 410 aa12.37□□□□□ -0.43
CLK3-221ENST00000568139 LYRM9A8MSI8 78 aa12.36□□□□□ -0.43
CLK3-221ENST00000568139 FABP1P07148 127 aa12.36□□□□□ -0.43
CLK3-221ENST00000568139 MEOX2P50222 304 aa12.36□□□□□ -0.43
CLK3-221ENST00000568139 SMCO1Q147U7 214 aa12.36□□□□□ -0.43
CLK3-221ENST00000568139 C16orf92Q96LL3 132 aa12.36□□□□□ -0.43
CLK3-221ENST00000568139 C17orf77Q96MU5 243 aa12.36□□□□□ -0.43
CLK3-221ENST00000568139 TRGV9Q99603 122 aa12.36□□□□□ -0.43
CLK3-221ENST00000568139 TMEM208Q9BTX3 173 aa12.36□□□□□ -0.43
CLK3-221ENST00000568139 PRR13Q9NZ81 148 aa12.36□□□□□ -0.43
CLK3-221ENST00000568139 KCNIP3Q9Y2W7 256 aa12.36□□□□□ -0.43
CLK3-221ENST00000568139 PRM2P04554 102 aa12.35□□□□□ -0.43
CLK3-221ENST00000568139 MRPS10P82664 201 aaKnown RBP12.35□□□□□ -0.43
CLK3-221ENST00000568139 OR2F1Q13607 317 aa12.35□□□□□ -0.43
CLK3-221ENST00000568139 PPP1R14BQ96C90 147 aa12.35□□□□□ -0.43
CLK3-221ENST00000568139 LRP1BQ9NZR2 4599 aa12.35□□□□□ -0.43
CLK3-221ENST00000568139 A0A0B4J2A0 478 aa12.34□□□□□ -0.43
CLK3-221ENST00000568139 ZNF705GA8MUZ8 300 aaPredicted RBP12.34□□□□□ -0.43
CLK3-221ENST00000568139 CRXO43186 299 aaPredicted RBP12.34□□□□□ -0.43
CLK3-221ENST00000568139 AKAIN1P0CW23 69 aa12.34□□□□□ -0.43
CLK3-221ENST00000568139 CTF1Q16619 201 aa12.34□□□□□ -0.43
CLK3-221ENST00000568139 OR4C16Q8NGL9 310 aa12.34□□□□□ -0.43
CLK3-221ENST00000568139 NAA50Q9GZZ1 169 aaKnown RBP12.34□□□□□ -0.43
CLK3-221ENST00000568139 MIXL1Q9H2W2 232 aa12.34□□□□□ -0.43
CLK3-221ENST00000568139 SHPKQ9UHJ6 478 aa12.34□□□□□ -0.43
CLK3-221ENST00000568139 IGKV1OR2-108A0A075B7D4 117 aa12.33□□□□□ -0.44
CLK3-221ENST00000568139 TSPOP30536 169 aa12.33□□□□□ -0.44
CLK3-221ENST00000568139 GALR1P47211 349 aa12.33□□□□□ -0.44
CLK3-221ENST00000568139 B2MP61769 119 aa12.33□□□□□ -0.44
CLK3-221ENST00000568139 LYZL2Q7Z4W2 148 aa12.33□□□□□ -0.44
CLK3-221ENST00000568139 Q8N1X5 172 aa12.33□□□□□ -0.44
CLK3-221ENST00000568139 THAP8Q8NA92 274 aa12.33□□□□□ -0.44
CLK3-221ENST00000568139 OR11H7Q8NGC8 314 aa12.33□□□□□ -0.44
CLK3-221ENST00000568139 SMIM4Q8WVI0 70 aa12.33□□□□□ -0.44
CLK3-221ENST00000568139 PRRT1Q99946 306 aa12.33□□□□□ -0.44
CLK3-221ENST00000568139 SLC25A32Q9H2D1 315 aa12.33□□□□□ -0.44
CLK3-221ENST00000568139 PLAC8L1A1L4L8 177 aa12.32□□□□□ -0.44
CLK3-221ENST00000568139 DUSP14O95147 198 aaKnown RBP12.32□□□□□ -0.44
CLK3-221ENST00000568139 CFDP00746 253 aaPredicted RBP12.32□□□□□ -0.44
CLK3-221ENST00000568139 DEFB130BP0DP73 79 aa12.32□□□□□ -0.44
CLK3-221ENST00000568139 DEFB130AP0DP74 79 aa12.32□□□□□ -0.44
CLK3-221ENST00000568139 SPINK13Q1W4C9 94 aa12.32□□□□□ -0.44
CLK3-221ENST00000568139 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.32□□□□□ -0.44
CLK3-221ENST00000568139 OR51S1Q8NGJ8 323 aa12.32□□□□□ -0.44
CLK3-221ENST00000568139 RSG1Q9BU20 258 aa12.32□□□□□ -0.44
CLK3-221ENST00000568139 SLC45A2Q9UMX9 530 aa12.32□□□□□ -0.44
CLK3-221ENST00000568139 LINC00588Q9Y4M8 146 aa12.32□□□□□ -0.44
CLK3-221ENST00000568139 ZNF98A6NK75 572 aa12.31□□□□□ -0.44
CLK3-221ENST00000568139 F5H768 121 aa12.31□□□□□ -0.44
CLK3-221ENST00000568139 M0R2Z0 102 aa12.31□□□□□ -0.44
CLK3-221ENST00000568139 NUDT3O95989 172 aa12.31□□□□□ -0.44
CLK3-221ENST00000568139 INSP01308 110 aa12.31□□□□□ -0.44
CLK3-221ENST00000568139 CNN1P51911 297 aaKnown RBP12.31□□□□□ -0.44
CLK3-221ENST00000568139 CCL18P55774 89 aa12.31□□□□□ -0.44
CLK3-221ENST00000568139 GGNBP1Q5YKI7 109 aa12.31□□□□□ -0.44
CLK3-221ENST00000568139 OR4D5Q8NGN0 318 aa12.31□□□□□ -0.44
CLK3-221ENST00000568139 CTDSPLO15194 276 aa12.3□□□□□ -0.44
CLK3-221ENST00000568139 PITX3O75364 302 aa12.3□□□□□ -0.44
CLK3-221ENST00000568139 AZU1P20160 251 aa12.3□□□□□ -0.44
CLK3-221ENST00000568139 RAB11AP62491 216 aa12.3□□□□□ -0.44
CLK3-221ENST00000568139 FCN2Q15485 313 aa12.3□□□□□ -0.44
CLK3-221ENST00000568139 GPR141Q7Z602 305 aa12.3□□□□□ -0.44
CLK3-221ENST00000568139 CLVS1Q8IUQ0 354 aaPredicted RBP12.3□□□□□ -0.44
CLK3-221ENST00000568139 OR1B1Q8NGR6 318 aa12.3□□□□□ -0.44
CLK3-221ENST00000568139 OR1S1Q8NH92 325 aa12.3□□□□□ -0.44
CLK3-221ENST00000568139 SCGB3A2Q96PL1 93 aa12.3□□□□□ -0.44
CLK3-221ENST00000568139 SLC25A22Q9H936 323 aa12.3□□□□□ -0.44
CLK3-221ENST00000568139 TRAV8-2A0A0B4J237 113 aa12.29□□□□□ -0.44
CLK3-221ENST00000568139 CBY3A6NI87 242 aa12.29□□□□□ -0.44
CLK3-221ENST00000568139 CTDSP2O14595 271 aa12.29□□□□□ -0.44
CLK3-221ENST00000568139 ATP5G1P05496 136 aa12.29□□□□□ -0.44
CLK3-221ENST00000568139 AKR1C4P17516 323 aa12.29□□□□□ -0.44
CLK3-221ENST00000568139 ATP5G3P48201 142 aa12.29□□□□□ -0.44
CLK3-221ENST00000568139 GPR82Q96P67 336 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms