RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 CCL13Q99616 98 aa13.24□□□□□ -0.29
TPM1-228ENST00000560975 SSUH2Q9Y2M2 353 aa13.24□□□□□ -0.29
TPM1-228ENST00000560975 IGHV1-18A0A0C4DH31 117 aa13.23□□□□□ -0.29
TPM1-228ENST00000560975 GNG7O60262 68 aa13.23□□□□□ -0.29
TPM1-228ENST00000560975 OR4A5Q8NH83 315 aa13.23□□□□□ -0.29
TPM1-228ENST00000560975 CSN1S1P47710 185 aa13.23□□□□□ -0.29
TPM1-228ENST00000560975 ATP1A1-AS1Q5TC04 95 aa13.23□□□□□ -0.29
TPM1-228ENST00000560975 HCP5Q6MZN7 132 aa13.23□□□□□ -0.29
TPM1-228ENST00000560975 FAM216BQ8N7L0 139 aa13.23□□□□□ -0.29
TPM1-228ENST00000560975 MDS2Q8NDY4 140 aa13.23□□□□□ -0.29
TPM1-228ENST00000560975 SRSF12Q8WXF0 261 aaKnown RBP13.23□□□□□ -0.29
TPM1-228ENST00000560975 TMEM186Q96B77 213 aa13.23□□□□□ -0.29
TPM1-228ENST00000560975 ZNF492Q9P255 531 aa13.23□□□□□ -0.29
TPM1-228ENST00000560975 CHTOPQ9Y3Y2 248 aaKnown RBP13.23□□□□□ -0.29
TPM1-228ENST00000560975 SPCS1Q9Y6A9 102 aa13.23□□□□□ -0.29
TPM1-228ENST00000560975 LOC400499M0QZD8 3231 aa13.23□□□□□ -0.29
TPM1-228ENST00000560975 C22orf46C9J442 243 aa13.22□□□□□ -0.29
TPM1-228ENST00000560975 MZT1Q08AG7 82 aa13.22□□□□□ -0.29
TPM1-228ENST00000560975 F11RQ9Y624 299 aaKnown RBP13.22□□□□□ -0.29
TPM1-228ENST00000560975 HAX1O00165 279 aa13.22□□□□□ -0.29
TPM1-228ENST00000560975 IFI27P40305 119 aaPredicted RBP13.22□□□□□ -0.29
TPM1-228ENST00000560975 RPL24P83731 157 aaKnown RBP13.22□□□□□ -0.29
TPM1-228ENST00000560975 MBNL2Q5VZF2 373 aaKnown RBP13.22□□□□□ -0.29
TPM1-228ENST00000560975 GFRA4Q9GZZ7 299 aa13.22□□□□□ -0.29
TPM1-228ENST00000560975 INTS1Q8N201 2190 aaKnown RBP13.22□□□□□ -0.29
TPM1-228ENST00000560975 ZNF318Q5VUA4 2279 aa13.22□□□□□ -0.29
TPM1-228ENST00000560975 CGB1A6NKQ9 187 aa13.22□□□□□ -0.29
TPM1-228ENST00000560975 PLP1P60201 277 aa13.22□□□□□ -0.29
TPM1-228ENST00000560975 LPAL2Q16609 132 aa13.22□□□□□ -0.29
TPM1-228ENST00000560975 SLC25A48Q6ZT89 311 aaKnown RBP13.22□□□□□ -0.29
TPM1-228ENST00000560975 GOLT1AQ6ZVE7 132 aa13.22□□□□□ -0.29
TPM1-228ENST00000560975 PIP4P2Q8N4L2 257 aa13.22□□□□□ -0.29
TPM1-228ENST00000560975 JKAMPQ9P055 326 aa13.22□□□□□ -0.29
TPM1-228ENST00000560975 A1L4Q6 167 aa13.21□□□□□ -0.29
TPM1-228ENST00000560975 CFHR2P36980 270 aa13.21□□□□□ -0.29
TPM1-228ENST00000560975 RAB9BQ9NP90 201 aa13.21□□□□□ -0.29
TPM1-228ENST00000560975 DCHS1Q96JQ0 3298 aa13.21□□□□□ -0.3
TPM1-228ENST00000560975 A0A1B0GUT8 65 aa13.21□□□□□ -0.3
TPM1-228ENST00000560975 NMUP48645 174 aa13.21□□□□□ -0.3
TPM1-228ENST00000560975 CACNG7P62955 275 aa13.21□□□□□ -0.3
TPM1-228ENST00000560975 MEF2CQ06413 473 aaPredicted RBP13.21□□□□□ -0.3
TPM1-228ENST00000560975 EXOC3-AS1Q8N2X6 119 aa13.21□□□□□ -0.3
TPM1-228ENST00000560975 NEGR1Q7Z3B1 354 aa13.2□□□□□ -0.3
TPM1-228ENST00000560975 Q86TA4 180 aa13.2□□□□□ -0.3
TPM1-228ENST00000560975 STXBP6Q8NFX7 210 aa13.2□□□□□ -0.3
TPM1-228ENST00000560975 OR5AN1Q8NGI8 311 aa13.2□□□□□ -0.3
TPM1-228ENST00000560975 VSTM2AQ8TAG5 236 aa13.2□□□□□ -0.3
TPM1-228ENST00000560975 SERTM2A0A1B0GWG4 89 aa13.2□□□□□ -0.3
TPM1-228ENST00000560975 DIAPH2-AS1Q14236 149 aa13.2□□□□□ -0.3
TPM1-228ENST00000560975 NPFFR1Q9GZQ6 430 aa13.2□□□□□ -0.3
TPM1-228ENST00000560975 SMG1Q96Q15 3661 aaKnown RBP13.2□□□□□ -0.3
TPM1-228ENST00000560975 KIR2DL2P43627 348 aaPredicted RBP13.19□□□□□ -0.3
TPM1-228ENST00000560975 SAMD13Q5VXD3 122 aa13.19□□□□□ -0.3
TPM1-228ENST00000560975 PCP2Q8IVA1 136 aa13.19□□□□□ -0.3
TPM1-228ENST00000560975 THAP8Q8NA92 274 aa13.19□□□□□ -0.3
TPM1-228ENST00000560975 GUCD1Q96NT3 240 aa13.19□□□□□ -0.3
TPM1-228ENST00000560975 RPUSD1Q9UJJ7 312 aaKnown RBP13.19□□□□□ -0.3
TPM1-228ENST00000560975 PLCE1Q9P212 2302 aa13.19□□□□□ -0.3
TPM1-228ENST00000560975 LGALS7P47929 136 aa13.19□□□□□ -0.3
TPM1-228ENST00000560975 SUB1P53999 127 aaKnown RBP eCLIP13.19□□□□□ -0.3
TPM1-228ENST00000560975 RBPJQ06330 500 aa13.19□□□□□ -0.3
TPM1-228ENST00000560975 WFDC3Q8IUB2 231 aa13.19□□□□□ -0.3
TPM1-228ENST00000560975 OSR1Q8TAX0 266 aaPredicted RBP13.19□□□□□ -0.3
TPM1-228ENST00000560975 CFAP47Q6ZTR5 3102 aa13.19□□□□□ -0.3
TPM1-228ENST00000560975 A0A1W2PPM0 123 aa13.18□□□□□ -0.3
TPM1-228ENST00000560975 FBLL1A6NHQ2 334 aaKnown RBP13.18□□□□□ -0.3
TPM1-228ENST00000560975 SMAD7O15105 426 aaKnown RBP13.18□□□□□ -0.3
TPM1-228ENST00000560975 HSD52Q0P140 79 aa13.18□□□□□ -0.3
TPM1-228ENST00000560975 BOD1L2Q8IYS8 172 aa13.18□□□□□ -0.3
TPM1-228ENST00000560975 C9orf106Q8NAJ2 232 aa13.18□□□□□ -0.3
TPM1-228ENST00000560975 TPSG1Q9NRR2 321 aa13.18□□□□□ -0.3
TPM1-228ENST00000560975 A0A096LNJ9 63 aa13.18□□□□□ -0.3
TPM1-228ENST00000560975 GP9P14770 177 aa13.18□□□□□ -0.3
TPM1-228ENST00000560975 ZCCHC24Q8N2G6 241 aaKnown RBP13.18□□□□□ -0.3
TPM1-228ENST00000560975 NPIPB6E9PJ23 425 aa13.18□□□□□ -0.3
TPM1-228ENST00000560975 LHBP01229 141 aa13.18□□□□□ -0.3
TPM1-228ENST00000560975 GAFA1Q96PS6 74 aa13.18□□□□□ -0.3
TPM1-228ENST00000560975 SPENQ96T58 3664 aaKnown RBP13.18□□□□□ -0.3
TPM1-228ENST00000560975 A0A1W2PNU3 283 aaPredicted RBP13.17□□□□□ -0.3
TPM1-228ENST00000560975 RIGQ13278 110 aa13.17□□□□□ -0.3
TPM1-228ENST00000560975 S100A7AQ86SG5 101 aa13.17□□□□□ -0.3
TPM1-228ENST00000560975 ZADH2Q8N4Q0 377 aa13.17□□□□□ -0.3
TPM1-228ENST00000560975 GTSF1LQ9H1H1 148 aa13.17□□□□□ -0.3
TPM1-228ENST00000560975 INSIG2Q9Y5U4 225 aa13.17□□□□□ -0.3
TPM1-228ENST00000560975 ROS1P08922 2347 aa13.17□□□□□ -0.3
TPM1-228ENST00000560975 OVOL3O00110 214 aa13.17□□□□□ -0.3
TPM1-228ENST00000560975 SLC25A17O43808 307 aa13.17□□□□□ -0.3
TPM1-228ENST00000560975 SPRY4Q9C004 299 aa13.17□□□□□ -0.3
TPM1-228ENST00000560975 TEX48A0A1B0GUV7 120 aa13.16□□□□□ -0.3
TPM1-228ENST00000560975 A0A1W2PPI3 338 aa13.16□□□□□ -0.3
TPM1-228ENST00000560975 M0R1B8 84 aa13.16□□□□□ -0.3
TPM1-228ENST00000560975 CCL3L1P16619 93 aa13.16□□□□□ -0.3
TPM1-228ENST00000560975 ADAMTSL5Q6ZMM2 481 aa13.16□□□□□ -0.3
TPM1-228ENST00000560975 MUC3AQ02505 3323 aa13.16□□□□□ -0.3
TPM1-228ENST00000560975 TMSB15BA0A087X1C1 80 aa13.16□□□□□ -0.3
TPM1-228ENST00000560975 ZNF785A8K8V0 405 aa13.16□□□□□ -0.3
TPM1-228ENST00000560975 D6R8Y8 96 aa13.16□□□□□ -0.3
TPM1-228ENST00000560975 ZNF207O43670 478 aaKnown RBP13.16□□□□□ -0.3
TPM1-228ENST00000560975 IGLV1-44P01699 117 aa13.16□□□□□ -0.3
TPM1-228ENST00000560975 FABP2P12104 132 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms