RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 ANKRD34BA5PLL1 514 aa6.65□□□□□ -1.34
TRAF3-209ENST00000560463 RBFOX3A6NFN3 312 aa6.65□□□□□ -1.34
TRAF3-209ENST00000560463 GGCTO75223 188 aaKnown RBP6.65□□□□□ -1.34
TRAF3-209ENST00000560463 ATP6V1G1O75348 118 aa6.65□□□□□ -1.34
TRAF3-209ENST00000560463 RPLP1P05386 114 aaKnown RBP6.65□□□□□ -1.34
TRAF3-209ENST00000560463 ARL14EPLP0DKL9 152 aa6.65□□□□□ -1.34
TRAF3-209ENST00000560463 CDX1P47902 265 aaPredicted RBP6.65□□□□□ -1.34
TRAF3-209ENST00000560463 FGF8P55075 233 aaPredicted RBP6.65□□□□□ -1.34
TRAF3-209ENST00000560463 CCL20P78556 96 aa6.65□□□□□ -1.34
TRAF3-209ENST00000560463 PEA15Q15121 130 aa6.65□□□□□ -1.34
TRAF3-209ENST00000560463 GUK1Q16774 197 aa6.65□□□□□ -1.34
TRAF3-209ENST00000560463 MIR17HGQ75NE6 70 aa6.65□□□□□ -1.34
TRAF3-209ENST00000560463 OR4F5Q8NH21 305 aa6.65□□□□□ -1.34
TRAF3-209ENST00000560463 LINC01006Q8NI28 216 aa6.65□□□□□ -1.34
TRAF3-209ENST00000560463 WIPF2Q8TF74 440 aaPredicted RBP6.65□□□□□ -1.34
TRAF3-209ENST00000560463 CITED4Q96RK1 184 aa6.65□□□□□ -1.34
TRAF3-209ENST00000560463 SLC25A39Q9BZJ4 359 aaPredicted RBP6.65□□□□□ -1.34
TRAF3-209ENST00000560463 EIF5A2Q9GZV4 153 aaKnown RBP6.65□□□□□ -1.34
TRAF3-209ENST00000560463 ZFAND3Q9H8U3 227 aa6.65□□□□□ -1.34
TRAF3-209ENST00000560463 GNB4Q9HAV0 340 aa6.65□□□□□ -1.34
TRAF3-209ENST00000560463 DOK5Q9P104 306 aa6.65□□□□□ -1.34
TRAF3-209ENST00000560463 RABAC1Q9UI14 185 aa6.65□□□□□ -1.34
TRAF3-209ENST00000560463 A0A1B0GV50 99 aa6.64□□□□□ -1.35
TRAF3-209ENST00000560463 PPP5D1E7EU14 171 aa6.64□□□□□ -1.35
TRAF3-209ENST00000560463 H3BRN7 92 aa6.64□□□□□ -1.35
TRAF3-209ENST00000560463 HMGB3O15347 200 aaKnown RBP6.64□□□□□ -1.35
TRAF3-209ENST00000560463 OR7C2O60412 319 aa6.64□□□□□ -1.35
TRAF3-209ENST00000560463 IGHV3-11P01762 117 aa6.64□□□□□ -1.35
TRAF3-209ENST00000560463 CD5P06127 495 aa6.64□□□□□ -1.35
TRAF3-209ENST00000560463 LGALS1P09382 135 aaKnown RBP6.64□□□□□ -1.35
TRAF3-209ENST00000560463 S100A1P23297 94 aa6.64□□□□□ -1.35
TRAF3-209ENST00000560463 GCHFRP30047 84 aa6.64□□□□□ -1.35
TRAF3-209ENST00000560463 USF2Q15853 346 aaPredicted RBP6.64□□□□□ -1.35
TRAF3-209ENST00000560463 ZNF506Q5JVG8 444 aa6.64□□□□□ -1.35
TRAF3-209ENST00000560463 SPATA31B1PQ5VZV4 182 aa6.64□□□□□ -1.35
TRAF3-209ENST00000560463 C10orf99Q6UWK7 81 aa6.64□□□□□ -1.35
TRAF3-209ENST00000560463 TOMM20LQ6UXN7 152 aa6.64□□□□□ -1.35
TRAF3-209ENST00000560463 LCNL1Q6ZST4 164 aa6.64□□□□□ -1.35
TRAF3-209ENST00000560463 BPIFA4PQ86YQ2 179 aa6.64□□□□□ -1.35
TRAF3-209ENST00000560463 GPHB5Q86YW7 130 aa6.64□□□□□ -1.35
TRAF3-209ENST00000560463 SUN5Q8TC36 379 aa6.64□□□□□ -1.35
TRAF3-209ENST00000560463 FAM167A-AS1Q96KT0 104 aa6.64□□□□□ -1.35
TRAF3-209ENST00000560463 UHRF2Q96PU4 802 aa6.64□□□□□ -1.35
TRAF3-209ENST00000560463 SHANK2-AS3Q9BTD1 123 aa6.64□□□□□ -1.35
TRAF3-209ENST00000560463 SCRT1Q9BWW7 348 aa6.64□□□□□ -1.35
TRAF3-209ENST00000560463 SLC25A2Q9BXI2 301 aa6.64□□□□□ -1.35
TRAF3-209ENST00000560463 NKX6-2Q9C056 277 aaPredicted RBP6.64□□□□□ -1.35
TRAF3-209ENST00000560463 OR51M1Q9H341 326 aa6.64□□□□□ -1.35
TRAF3-209ENST00000560463 TMEM14CQ9P0S9 112 aa6.64□□□□□ -1.35
TRAF3-209ENST00000560463 MAST4O15021 2626 aa6.64□□□□□ -1.35
TRAF3-209ENST00000560463 TEP1Q99973 2627 aaKnown RBP6.63□□□□□ -1.35
TRAF3-209ENST00000560463 LOC102723971A0A1B0GUV8 181 aa6.63□□□□□ -1.35
TRAF3-209ENST00000560463 CLPSL1A2RUU4 121 aa6.63□□□□□ -1.35
TRAF3-209ENST00000560463 ZNF98A6NK75 572 aa6.63□□□□□ -1.35
TRAF3-209ENST00000560463 KRBOX1C9JBD0 128 aa6.63□□□□□ -1.35
TRAF3-209ENST00000560463 HSPB1P04792 205 aaKnown RBP6.63□□□□□ -1.35
TRAF3-209ENST00000560463 BCL2P10415 239 aa6.63□□□□□ -1.35
TRAF3-209ENST00000560463 FAM106AQ4KMX7 169 aa6.63□□□□□ -1.35
TRAF3-209ENST00000560463 TOR2AQ5JU69 321 aa6.63□□□□□ -1.35
TRAF3-209ENST00000560463 IQCF2Q8IXL9 164 aa6.63□□□□□ -1.35
TRAF3-209ENST00000560463 NARS2Q96I59 477 aaKnown RBP6.63□□□□□ -1.35
TRAF3-209ENST00000560463 ZNF414Q96IQ9 312 aa6.63□□□□□ -1.35
TRAF3-209ENST00000560463 GPR82Q96P67 336 aa6.63□□□□□ -1.35
TRAF3-209ENST00000560463 METTL26Q96S19 204 aa6.63□□□□□ -1.35
TRAF3-209ENST00000560463 PAXXQ9BUH6 204 aa6.63□□□□□ -1.35
TRAF3-209ENST00000560463 TMPRSS5Q9H3S3 457 aa6.63□□□□□ -1.35
TRAF3-209ENST00000560463 GNG13Q9P2W3 67 aa6.63□□□□□ -1.35
TRAF3-209ENST00000560463 VAX2Q9UIW0 290 aa6.63□□□□□ -1.35
TRAF3-209ENST00000560463 RNF114Q9Y508 228 aa6.63□□□□□ -1.35
TRAF3-209ENST00000560463 TRAV5A0A0B4J249 113 aa6.62□□□□□ -1.35
TRAF3-209ENST00000560463 A0A1W2PRE2 83 aa6.62□□□□□ -1.35
TRAF3-209ENST00000560463 CYSRT1A8MQ03 144 aa6.62□□□□□ -1.35
TRAF3-209ENST00000560463 I3L521 148 aa6.62□□□□□ -1.35
TRAF3-209ENST00000560463 K7EMT4 169 aa6.62□□□□□ -1.35
TRAF3-209ENST00000560463 TRBV12-3P01733 135 aa6.62□□□□□ -1.35
TRAF3-209ENST00000560463 NPPCP23582 126 aa6.62□□□□□ -1.35
TRAF3-209ENST00000560463 CRYBB3P26998 211 aa6.62□□□□□ -1.35
TRAF3-209ENST00000560463 MEF2BQ02080 365 aaPredicted RBP6.62□□□□□ -1.35
TRAF3-209ENST00000560463 ICAM4Q14773 271 aa6.62□□□□□ -1.35
TRAF3-209ENST00000560463 HAGHQ16775 308 aa6.62□□□□□ -1.35
TRAF3-209ENST00000560463 RPEL1Q2QD12 228 aa6.62□□□□□ -1.35
TRAF3-209ENST00000560463 C1orf194Q5T5A4 169 aa6.62□□□□□ -1.35
TRAF3-209ENST00000560463 MORN5Q5VZ52 161 aa6.62□□□□□ -1.35
TRAF3-209ENST00000560463 C4orf3Q8WVX3 66 aa6.62□□□□□ -1.35
TRAF3-209ENST00000560463 TMEM190Q8WZ59 177 aa6.62□□□□□ -1.35
TRAF3-209ENST00000560463 ZNF503Q96F45 646 aa6.62□□□□□ -1.35
TRAF3-209ENST00000560463 TREM1Q9NP99 234 aa6.62□□□□□ -1.35
TRAF3-209ENST00000560463 IGHV3-35A0A0C4DH35 117 aa6.61□□□□□ -1.35
TRAF3-209ENST00000560463 A0A1W2PS18 150 aa6.61□□□□□ -1.35
TRAF3-209ENST00000560463 TMEM250H0YL14 139 aa6.61□□□□□ -1.35
TRAF3-209ENST00000560463 LGALS9O00182 355 aa6.61□□□□□ -1.35
TRAF3-209ENST00000560463 BUB3O43684 328 aa6.61□□□□□ -1.35
TRAF3-209ENST00000560463 PDE6DO43924 150 aa6.61□□□□□ -1.35
TRAF3-209ENST00000560463 PAGE4O60829 102 aa6.61□□□□□ -1.35
TRAF3-209ENST00000560463 EIF3GO75821 320 aaKnown RBP eCLIP6.61□□□□□ -1.35
TRAF3-209ENST00000560463 HIST1H1EP10412 219 aaKnown RBP6.61□□□□□ -1.35
TRAF3-209ENST00000560463 GP9P14770 177 aa6.61□□□□□ -1.35
TRAF3-209ENST00000560463 RPL7P18124 248 aaKnown RBP6.61□□□□□ -1.35
TRAF3-209ENST00000560463 ZP3P21754 424 aa6.61□□□□□ -1.35
TRAF3-209ENST00000560463 PROK1P58294 105 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms