RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 TET1Q8NFU7 2136 aa9.75□□□□□ -0.85
NEK9-210ENST00000557026 ASCC3Q8N3C0 2202 aaKnown RBP9.75□□□□□ -0.85
NEK9-210ENST00000557026 FAM231BA6NCW3 169 aa9.75□□□□□ -0.85
NEK9-210ENST00000557026 CFPP27918 469 aa9.75□□□□□ -0.85
NEK9-210ENST00000557026 C9orf66Q5T8R8 295 aa9.75□□□□□ -0.85
NEK9-210ENST00000557026 TRPT1Q86TN4 253 aaKnown RBP9.75□□□□□ -0.85
NEK9-210ENST00000557026 RNF152Q8N8N0 203 aa9.75□□□□□ -0.85
NEK9-210ENST00000557026 ICE1Q9Y2F5 2266 aa9.75□□□□□ -0.85
NEK9-210ENST00000557026 DNAJC13O75165 2243 aa9.75□□□□□ -0.85
NEK9-210ENST00000557026 LDLRAD4O15165 306 aa9.75□□□□□ -0.85
NEK9-210ENST00000557026 DEFB113Q30KQ7 82 aa9.75□□□□□ -0.85
NEK9-210ENST00000557026 FBLN7Q53RD9 439 aa9.75□□□□□ -0.85
NEK9-210ENST00000557026 GGTLC1Q9BX51 225 aa9.75□□□□□ -0.85
NEK9-210ENST00000557026 GFRA4Q9GZZ7 299 aa9.75□□□□□ -0.85
NEK9-210ENST00000557026 IGKV1D-17A0A075B6S4 117 aa9.74□□□□□ -0.85
NEK9-210ENST00000557026 F8VVB4 439 aa9.74□□□□□ -0.85
NEK9-210ENST00000557026 F8VWA3 439 aa9.74□□□□□ -0.85
NEK9-210ENST00000557026 DMRTC2Q8IXT2 367 aaPredicted RBP9.74□□□□□ -0.85
NEK9-210ENST00000557026 TMEM256Q8N2U0 113 aa9.74□□□□□ -0.85
NEK9-210ENST00000557026 SHANK2-AS3Q9BTD1 123 aa9.74□□□□□ -0.85
NEK9-210ENST00000557026 PRDM13Q9H4Q3 707 aa9.74□□□□□ -0.85
NEK9-210ENST00000557026 SRRM4A7MD48 611 aaKnown RBP9.74□□□□□ -0.85
NEK9-210ENST00000557026 TCRAP04437 139 aa9.74□□□□□ -0.85
NEK9-210ENST00000557026 TTC32Q5I0X7 151 aa9.74□□□□□ -0.85
NEK9-210ENST00000557026 C1QTNF9P0C862 333 aa9.74□□□□□ -0.85
NEK9-210ENST00000557026 ZCCHC24Q8N2G6 241 aaKnown RBP9.74□□□□□ -0.85
NEK9-210ENST00000557026 IGKV1-12A0A0C4DH73 117 aa9.74□□□□□ -0.85
NEK9-210ENST00000557026 GGTLC3B5MD39 225 aa9.74□□□□□ -0.85
NEK9-210ENST00000557026 IGKV1D-12P01611 117 aa9.74□□□□□ -0.85
NEK9-210ENST00000557026 TDGF1P3P51864 188 aa9.74□□□□□ -0.85
NEK9-210ENST00000557026 BRD3OSQ6XYD6 125 aa9.74□□□□□ -0.85
NEK9-210ENST00000557026 TMEM219Q86XT9 240 aa9.74□□□□□ -0.85
NEK9-210ENST00000557026 MS4A6AQ9H2W1 248 aa9.74□□□□□ -0.85
NEK9-210ENST00000557026 DKK4Q9UBT3 224 aa9.74□□□□□ -0.85
NEK9-210ENST00000557026 DNAJC30Q96LL9 226 aa9.73□□□□□ -0.85
NEK9-210ENST00000557026 ACTL10Q5JWF8 245 aa9.73□□□□□ -0.85
NEK9-210ENST00000557026 ATP6V0BQ99437 205 aa9.73□□□□□ -0.85
NEK9-210ENST00000557026 TMEM89A2RUT3 159 aa9.73□□□□□ -0.85
NEK9-210ENST00000557026 TNFRSF6BO95407 300 aa9.73□□□□□ -0.85
NEK9-210ENST00000557026 ATP5G3P48201 142 aa9.73□□□□□ -0.85
NEK9-210ENST00000557026 PAQR4Q8N4S7 273 aaPredicted RBP9.73□□□□□ -0.85
NEK9-210ENST00000557026 CHD5Q8TDI0 1954 aa9.73□□□□□ -0.85
NEK9-210ENST00000557026 MYMXA0A1B0GTQ4 84 aa9.73□□□□□ -0.85
NEK9-210ENST00000557026 KLRD1Q13241 179 aa9.73□□□□□ -0.85
NEK9-210ENST00000557026 ABCA7Q8IZY2 2146 aa9.73□□□□□ -0.85
NEK9-210ENST00000557026 LINC00469Q8N7U9 141 aa9.73□□□□□ -0.85
NEK9-210ENST00000557026 LAIR2Q6ISS4 152 aa9.72□□□□□ -0.85
NEK9-210ENST00000557026 IGHV2-70P01814 119 aa9.72□□□□□ -0.85
NEK9-210ENST00000557026 RPL23P62829 140 aaKnown RBP9.72□□□□□ -0.85
NEK9-210ENST00000557026 CST9LQ9H4G1 147 aa9.72□□□□□ -0.85
NEK9-210ENST00000557026 PDCD11Q14690 1871 aaKnown RBP9.72□□□□□ -0.85
NEK9-210ENST00000557026 RAMP3O60896 148 aa9.72□□□□□ -0.85
NEK9-210ENST00000557026 CBLN1P23435 193 aa9.72□□□□□ -0.85
NEK9-210ENST00000557026 SFTA2Q6UW10 78 aa9.72□□□□□ -0.85
NEK9-210ENST00000557026 ZNF833PQ6ZTB9 187 aa9.72□□□□□ -0.85
NEK9-210ENST00000557026 ZNF319Q9P2F9 582 aa9.72□□□□□ -0.85
NEK9-210ENST00000557026 VPREB3Q9UKI3 123 aa9.72□□□□□ -0.85
NEK9-210ENST00000557026 LINC00614P0C842 121 aa9.71□□□□□ -0.85
NEK9-210ENST00000557026 FOXE3Q13461 319 aa9.71□□□□□ -0.85
NEK9-210ENST00000557026 ZNF876PQ49A33 203 aa9.71□□□□□ -0.85
NEK9-210ENST00000557026 CT83Q5H943 113 aa9.71□□□□□ -0.85
NEK9-210ENST00000557026 COQ2Q96H96 371 aa9.71□□□□□ -0.85
NEK9-210ENST00000557026 ANK1P16157 1881 aa9.71□□□□□ -0.85
NEK9-210ENST00000557026 DMRTA1Q5VZB9 504 aa9.71□□□□□ -0.85
NEK9-210ENST00000557026 C5orf30Q96GV9 206 aa9.71□□□□□ -0.85
NEK9-210ENST00000557026 LINC00158P58513 81 aa9.71□□□□□ -0.86
NEK9-210ENST00000557026 ATXN8Q156A1 80 aa9.71□□□□□ -0.86
NEK9-210ENST00000557026 TMEM170AQ8WVE7 144 aa9.71□□□□□ -0.86
NEK9-210ENST00000557026 RPL35AP18077 110 aaKnown RBP9.71□□□□□ -0.86
NEK9-210ENST00000557026 LY6G5BQ8NDX9 201 aa9.71□□□□□ -0.86
NEK9-210ENST00000557026 GLMPQ8WWB7 406 aa9.71□□□□□ -0.86
NEK9-210ENST00000557026 COL4A6Q14031 1691 aa9.71□□□□□ -0.86
NEK9-210ENST00000557026 LY6G6EA0A0G2JKS1 128 aa9.7□□□□□ -0.86
NEK9-210ENST00000557026 FOXA3P55318 350 aaPredicted RBP9.7□□□□□ -0.86
NEK9-210ENST00000557026 IFITM3Q01628 133 aa9.7□□□□□ -0.86
NEK9-210ENST00000557026 U3KQA8 63 aa9.7□□□□□ -0.86
NEK9-210ENST00000557026 PMS2P5A8MQ11 134 aa9.7□□□□□ -0.86
NEK9-210ENST00000557026 IGKCP01834 107 aa9.7□□□□□ -0.86
NEK9-210ENST00000557026 RNASE2P10153 161 aaKnown RBP9.7□□□□□ -0.86
NEK9-210ENST00000557026 C21orf62-AS1Q17RA5 79 aa9.7□□□□□ -0.86
NEK9-210ENST00000557026 C10orf126Q8N4M7 172 aa9.7□□□□□ -0.86
NEK9-210ENST00000557026 ZNF492Q9P255 531 aa9.7□□□□□ -0.86
NEK9-210ENST00000557026 DOCK4Q8N1I0 1966 aa9.7□□□□□ -0.86
NEK9-210ENST00000557026 C6orf226Q5I0X4 101 aa9.7□□□□□ -0.86
NEK9-210ENST00000557026 CD24P25063 80 aa9.7□□□□□ -0.86
NEK9-210ENST00000557026 PLA2G5P39877 138 aa9.7□□□□□ -0.86
NEK9-210ENST00000557026 KIAA1644Q3SXP7 199 aa9.7□□□□□ -0.86
NEK9-210ENST00000557026 LRRC75A-AS1Q8N1F1 130 aa9.7□□□□□ -0.86
NEK9-210ENST00000557026 C11orf44Q8N8P7 122 aa9.7□□□□□ -0.86
NEK9-210ENST00000557026 ZSWIM8A7E2V4 1837 aa9.7□□□□□ -0.86
NEK9-210ENST00000557026 TRBV25-1A0A075B6N4 114 aa9.69□□□□□ -0.86
NEK9-210ENST00000557026 FOXG1P55316 489 aaPredicted RBP9.69□□□□□ -0.86
NEK9-210ENST00000557026 SYNJ2BPP57105 145 aa9.69□□□□□ -0.86
NEK9-210ENST00000557026 NEGR1Q7Z3B1 354 aa9.69□□□□□ -0.86
NEK9-210ENST00000557026 TMEM75Q8N9X5 138 aa9.69□□□□□ -0.86
NEK9-210ENST00000557026 MRPL53Q96EL3 112 aaKnown RBP9.69□□□□□ -0.86
NEK9-210ENST00000557026 OVOL3O00110 214 aa9.69□□□□□ -0.86
NEK9-210ENST00000557026 DEFB131AP59861 70 aa9.69□□□□□ -0.86
NEK9-210ENST00000557026 AGMATQ9BSE5 352 aa9.69□□□□□ -0.86
NEK9-210ENST00000557026 MYOFQ9NZM1 2061 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms