RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 S100A5P33763 92 aa16.24■□□□□ 0.19
ACTN1-220ENST00000556433 PSMB3P49720 205 aa16.24■□□□□ 0.19
ACTN1-220ENST00000556433 RPP30P78346 268 aaKnown RBP16.24■□□□□ 0.19
ACTN1-220ENST00000556433 ZNF705AQ6ZN79 300 aaPredicted RBP16.24■□□□□ 0.19
ACTN1-220ENST00000556433 THAP8Q8NA92 274 aa16.24■□□□□ 0.19
ACTN1-220ENST00000556433 CIB3Q96Q77 187 aaPredicted RBP16.24■□□□□ 0.19
ACTN1-220ENST00000556433 WRBO00258 174 aa16.23■□□□□ 0.19
ACTN1-220ENST00000556433 SOCS3O14543 225 aa16.23■□□□□ 0.19
ACTN1-220ENST00000556433 SYNGR2O43760 224 aa16.23■□□□□ 0.19
ACTN1-220ENST00000556433 HOXB5P09067 269 aa16.23■□□□□ 0.19
ACTN1-220ENST00000556433 PPP1R1AQ13522 171 aa16.23■□□□□ 0.19
ACTN1-220ENST00000556433 ZNF79Q15937 498 aa16.23■□□□□ 0.19
ACTN1-220ENST00000556433 GGNBP1Q5YKI7 109 aa16.23■□□□□ 0.19
ACTN1-220ENST00000556433 OR4B1Q8NGF8 309 aa16.23■□□□□ 0.19
ACTN1-220ENST00000556433 NEU1Q99519 415 aa16.23■□□□□ 0.19
ACTN1-220ENST00000556433 DNAH6Q9C0G6 4158 aa16.23■□□□□ 0.19
ACTN1-220ENST00000556433 IGHV3OR16-12A0A075B7B8 117 aa16.22■□□□□ 0.19
ACTN1-220ENST00000556433 CCDC160A6NGH7 325 aa16.22■□□□□ 0.19
ACTN1-220ENST00000556433 CFDP00746 253 aaPredicted RBP16.22■□□□□ 0.19
ACTN1-220ENST00000556433 DEDD2Q8WXF8 326 aa16.22■□□□□ 0.19
ACTN1-220ENST00000556433 CLUHP3Q96NS8 147 aa16.22■□□□□ 0.19
ACTN1-220ENST00000556433 SMIM9A6NGZ8 99 aa16.21■□□□□ 0.19
ACTN1-220ENST00000556433 ZNF705FA8MVS1 300 aaPredicted RBP16.21■□□□□ 0.19
ACTN1-220ENST00000556433 ISLRO14498 428 aa16.21■□□□□ 0.19
ACTN1-220ENST00000556433 ZNF705DP0CH99 300 aaPredicted RBP16.21■□□□□ 0.19
ACTN1-220ENST00000556433 ZNF705BP0CI00 300 aaPredicted RBP16.21■□□□□ 0.19
ACTN1-220ENST00000556433 EMP1P54849 157 aa16.21■□□□□ 0.19
ACTN1-220ENST00000556433 SPATA31B1PQ5VZV4 182 aa16.21■□□□□ 0.19
ACTN1-220ENST00000556433 EBLN2Q6P2I7 272 aa16.21■□□□□ 0.19
ACTN1-220ENST00000556433 SPART-AS1P0CW21 52 aa16.2■□□□□ 0.18
ACTN1-220ENST00000556433 SPANXN5Q5MJ07 72 aa16.2■□□□□ 0.18
ACTN1-220ENST00000556433 CCDC190Q86UF4 302 aa16.2■□□□□ 0.18
ACTN1-220ENST00000556433 SCRT1Q9BWW7 348 aa16.2■□□□□ 0.18
ACTN1-220ENST00000556433 SLC35B3Q9H1N7 401 aa16.2■□□□□ 0.18
ACTN1-220ENST00000556433 TMEM189A5PLL7 270 aa16.19■□□□□ 0.18
ACTN1-220ENST00000556433 PRSS46E5RG02 174 aa16.19■□□□□ 0.18
ACTN1-220ENST00000556433 F6UB75 175 aa16.19■□□□□ 0.18
ACTN1-220ENST00000556433 AMBPP02760 352 aa16.19■□□□□ 0.18
ACTN1-220ENST00000556433 PSG9Q00887 426 aa16.19■□□□□ 0.18
ACTN1-220ENST00000556433 SAMD13Q5VXD3 122 aa16.19■□□□□ 0.18
ACTN1-220ENST00000556433 ZNF709Q8N972 641 aa16.19■□□□□ 0.18
ACTN1-220ENST00000556433 C16orf92Q96LL3 132 aa16.19■□□□□ 0.18
ACTN1-220ENST00000556433 RSG1Q9BU20 258 aa16.19■□□□□ 0.18
ACTN1-220ENST00000556433 SLC25A22Q9H936 323 aa16.19■□□□□ 0.18
ACTN1-220ENST00000556433 RFNGQ9Y644 331 aa16.19■□□□□ 0.18
ACTN1-220ENST00000556433 ZNF98A6NK75 572 aa16.18■□□□□ 0.18
ACTN1-220ENST00000556433 ORM2P19652 201 aa16.18■□□□□ 0.18
ACTN1-220ENST00000556433 GATA2P23769 480 aaPredicted RBP16.18■□□□□ 0.18
ACTN1-220ENST00000556433 GALR1P47211 349 aa16.18■□□□□ 0.18
ACTN1-220ENST00000556433 MEOX2P50222 304 aa16.18■□□□□ 0.18
ACTN1-220ENST00000556433 PAX9P55771 341 aa16.18■□□□□ 0.18
ACTN1-220ENST00000556433 FAM78BQ5VT40 261 aa16.18■□□□□ 0.18
ACTN1-220ENST00000556433 BPIFCQ8NFQ6 507 aa16.18■□□□□ 0.18
ACTN1-220ENST00000556433 NDUFAF3Q9BU61 184 aa16.18■□□□□ 0.18
ACTN1-220ENST00000556433 SLC25A32Q9H2D1 315 aa16.18■□□□□ 0.18
ACTN1-220ENST00000556433 RPRMQ9NS64 109 aa16.18■□□□□ 0.18
ACTN1-220ENST00000556433 SLC45A2Q9UMX9 530 aa16.18■□□□□ 0.18
ACTN1-220ENST00000556433 STRAPQ9Y3F4 350 aaKnown RBP16.18■□□□□ 0.18
ACTN1-220ENST00000556433 A0A0J9YX75 114 aa16.17■□□□□ 0.18
ACTN1-220ENST00000556433 H3BP45 60 aa16.17■□□□□ 0.18
ACTN1-220ENST00000556433 AKR1C1Q04828 323 aa16.17■□□□□ 0.18
ACTN1-220ENST00000556433 TMEM182Q6ZP80 229 aaPredicted RBP16.17■□□□□ 0.18
ACTN1-220ENST00000556433 C20orf173Q96LM9 149 aa16.17■□□□□ 0.18
ACTN1-220ENST00000556433 GOLT1BQ9Y3E0 138 aa16.17■□□□□ 0.18
ACTN1-220ENST00000556433 UBE2MP61081 183 aaKnown RBP16.16■□□□□ 0.18
ACTN1-220ENST00000556433 C7orf50Q9BRJ6 194 aaKnown RBP16.16■□□□□ 0.18
ACTN1-220ENST00000556433 TMEM147Q9BVK8 224 aa16.16■□□□□ 0.18
ACTN1-220ENST00000556433 C9orf170A2RU37 121 aa16.15■□□□□ 0.18
ACTN1-220ENST00000556433 ADAP1O75689 374 aa16.15■□□□□ 0.18
ACTN1-220ENST00000556433 ID3Q02535 119 aa16.15■□□□□ 0.18
ACTN1-220ENST00000556433 SPANXN2Q5MJ10 180 aa16.15■□□□□ 0.18
ACTN1-220ENST00000556433 OR4D5Q8NGN0 318 aa16.15■□□□□ 0.18
ACTN1-220ENST00000556433 OR1B1Q8NGR6 318 aa16.15■□□□□ 0.18
ACTN1-220ENST00000556433 C17orf77Q96MU5 243 aa16.15■□□□□ 0.18
ACTN1-220ENST00000556433 P0DMU3 169 aa16.14■□□□□ 0.17
ACTN1-220ENST00000556433 FAM231AP0DMU4 169 aa16.14■□□□□ 0.17
ACTN1-220ENST00000556433 FAM231CP0DMU5 169 aa16.14■□□□□ 0.17
ACTN1-220ENST00000556433 S100A7P31151 101 aa16.14■□□□□ 0.17
ACTN1-220ENST00000556433 INPP1P49441 399 aa16.14■□□□□ 0.17
ACTN1-220ENST00000556433 POLR2GP62487 172 aaKnown RBP eCLIP16.14■□□□□ 0.17
ACTN1-220ENST00000556433 ACOT7LQ6ZUV0 252 aa16.14■□□□□ 0.17
ACTN1-220ENST00000556433 C1orf158Q8N1D5 194 aa16.14■□□□□ 0.17
ACTN1-220ENST00000556433 POM121L12Q8N7R1 296 aa16.14■□□□□ 0.17
ACTN1-220ENST00000556433 SRRQ9GZT4 340 aa16.14■□□□□ 0.17
ACTN1-220ENST00000556433 DOK5Q9P104 306 aa16.14■□□□□ 0.17
ACTN1-220ENST00000556433 DKK2Q9UBU2 259 aa16.14■□□□□ 0.17
ACTN1-220ENST00000556433 HBE1P02100 147 aa16.13■□□□□ 0.17
ACTN1-220ENST00000556433 FAM222AQ5U5X8 452 aa16.13■□□□□ 0.17
ACTN1-220ENST00000556433 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.13■□□□□ 0.17
ACTN1-220ENST00000556433 TMEM144Q7Z5S9 345 aa16.13■□□□□ 0.17
ACTN1-220ENST00000556433 GPR82Q96P67 336 aa16.13■□□□□ 0.17
ACTN1-220ENST00000556433 NIPSNAP3BQ9BS92 247 aa16.13■□□□□ 0.17
ACTN1-220ENST00000556433 PSENENQ9NZ42 101 aa16.13■□□□□ 0.17
ACTN1-220ENST00000556433 PLA2G2EQ9NZK7 142 aa16.13■□□□□ 0.17
ACTN1-220ENST00000556433 TEX48A0A1B0GUV7 120 aa16.12■□□□□ 0.17
ACTN1-220ENST00000556433 SMCO3A2RU48 225 aa16.12■□□□□ 0.17
ACTN1-220ENST00000556433 NAP1L6A6NFF2 107 aa16.12■□□□□ 0.17
ACTN1-220ENST00000556433 FLVCR2Q9UPI3 526 aa16.12■□□□□ 0.17
ACTN1-220ENST00000556433 LOC102723971A0A1B0GUV8 181 aa16.11■□□□□ 0.17
ACTN1-220ENST00000556433 NDUFB6O95139 128 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms