RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 PDZD11Q5EBL8 140 aa13.74□□□□□ -0.21
SHOX-204ENST00000554971 Q6YL49 198 aa13.74□□□□□ -0.21
SHOX-204ENST00000554971 MMD2Q8IY49 270 aa13.74□□□□□ -0.21
SHOX-204ENST00000554971 TMEM37Q8WXS4 190 aa13.74□□□□□ -0.21
SHOX-204ENST00000554971 TMEM18Q96B42 140 aa13.74□□□□□ -0.21
SHOX-204ENST00000554971 TRBV9A0A0B4J1U6 114 aa13.74□□□□□ -0.21
SHOX-204ENST00000554971 TCRBV4S1A1TA0A5B7 111 aa13.74□□□□□ -0.21
SHOX-204ENST00000554971 OR7C2O60412 319 aa13.74□□□□□ -0.21
SHOX-204ENST00000554971 AMBPP02760 352 aa13.74□□□□□ -0.21
SHOX-204ENST00000554971 GNG4P50150 75 aa13.74□□□□□ -0.21
SHOX-204ENST00000554971 SRSF2Q01130 221 aaKnown RBP13.74□□□□□ -0.21
SHOX-204ENST00000554971 WT1-ASQ06250 92 aa13.74□□□□□ -0.21
SHOX-204ENST00000554971 SCGB2A2Q13296 93 aa13.74□□□□□ -0.21
SHOX-204ENST00000554971 FBLN7Q53RD9 439 aa13.74□□□□□ -0.21
SHOX-204ENST00000554971 PIFOQ8TCI5 191 aa13.74□□□□□ -0.21
SHOX-204ENST00000554971 ZNF503Q96F45 646 aa13.74□□□□□ -0.21
SHOX-204ENST00000554971 DUX5Q96PT3 197 aa13.74□□□□□ -0.21
SHOX-204ENST00000554971 RNF5Q99942 180 aa13.74□□□□□ -0.21
SHOX-204ENST00000554971 OSTCQ9NRP0 149 aa13.74□□□□□ -0.21
SHOX-204ENST00000554971 IGHV4-59P01825 116 aa13.73□□□□□ -0.21
SHOX-204ENST00000554971 REG1BP48304 166 aa13.73□□□□□ -0.21
SHOX-204ENST00000554971 TAS2R60P59551 318 aa13.73□□□□□ -0.21
SHOX-204ENST00000554971 HILS1P60008 231 aa13.73□□□□□ -0.21
SHOX-204ENST00000554971 TIGITQ495A1 244 aa13.73□□□□□ -0.21
SHOX-204ENST00000554971 TPTE2P1Q5T6R2 138 aa13.73□□□□□ -0.21
SHOX-204ENST00000554971 MOB3BQ86TA1 216 aa13.73□□□□□ -0.21
SHOX-204ENST00000554971 STXBP6Q8NFX7 210 aa13.73□□□□□ -0.21
SHOX-204ENST00000554971 CGB1A6NKQ9 187 aa13.72□□□□□ -0.21
SHOX-204ENST00000554971 CORTO00230 105 aa13.72□□□□□ -0.21
SHOX-204ENST00000554971 HOXA3O43365 443 aaPredicted RBP13.72□□□□□ -0.21
SHOX-204ENST00000554971 IER3P46695 156 aa13.72□□□□□ -0.21
SHOX-204ENST00000554971 ZNF90Q03938 601 aa13.72□□□□□ -0.21
SHOX-204ENST00000554971 AURKAIP1Q9NWT8 199 aaPredicted RBP13.72□□□□□ -0.21
SHOX-204ENST00000554971 A0A1W2PPI3 338 aa13.72□□□□□ -0.21
SHOX-204ENST00000554971 PGPEP1LA6NFU8 196 aa13.72□□□□□ -0.21
SHOX-204ENST00000554971 K7EN84 100 aa13.72□□□□□ -0.21
SHOX-204ENST00000554971 CRYGCP07315 174 aa13.72□□□□□ -0.21
SHOX-204ENST00000554971 MLANAQ16655 118 aa13.72□□□□□ -0.21
SHOX-204ENST00000554971 RPEL1Q2QD12 228 aa13.72□□□□□ -0.21
SHOX-204ENST00000554971 FAM167A-AS1Q96KT0 104 aa13.72□□□□□ -0.21
SHOX-204ENST00000554971 AMMECR1Q9Y4X0 333 aaPredicted RBP13.72□□□□□ -0.21
SHOX-204ENST00000554971 DNAJC9-AS1A6NH13 148 aa13.71□□□□□ -0.21
SHOX-204ENST00000554971 ISLRO14498 428 aa13.71□□□□□ -0.21
SHOX-204ENST00000554971 PLXNB1O43157 2135 aa13.71□□□□□ -0.21
SHOX-204ENST00000554971 CRYBB3P26998 211 aa13.71□□□□□ -0.21
SHOX-204ENST00000554971 PKIAP61925 76 aa13.71□□□□□ -0.21
SHOX-204ENST00000554971 C10orf113Q5VZT2 155 aa13.71□□□□□ -0.21
SHOX-204ENST00000554971 OR2T6Q8NHC8 308 aa13.71□□□□□ -0.21
SHOX-204ENST00000554971 ANK2Q01484 3957 aa13.71□□□□□ -0.21
SHOX-204ENST00000554971 TNCP24821 2201 aa13.71□□□□□ -0.21
SHOX-204ENST00000554971 GATCO43716 136 aaKnown RBP13.7□□□□□ -0.22
SHOX-204ENST00000554971 COX7A2P2O60397 106 aa13.7□□□□□ -0.22
SHOX-204ENST00000554971 CRYGBP07316 175 aa13.7□□□□□ -0.22
SHOX-204ENST00000554971 PRSS8Q16651 343 aa13.7□□□□□ -0.22
SHOX-204ENST00000554971 ZNF418Q8TF45 676 aaPredicted RBP13.7□□□□□ -0.22
SHOX-204ENST00000554971 TMEM190Q8WZ59 177 aa13.7□□□□□ -0.22
SHOX-204ENST00000554971 CFHR4Q92496 578 aa13.7□□□□□ -0.22
SHOX-204ENST00000554971 RPEQ96AT9 228 aa13.7□□□□□ -0.22
SHOX-204ENST00000554971 E7EUB6 86 aa13.7□□□□□ -0.22
SHOX-204ENST00000554971 SLC25A17O43808 307 aa13.7□□□□□ -0.22
SHOX-204ENST00000554971 CD24P25063 80 aa13.7□□□□□ -0.22
SHOX-204ENST00000554971 CEACAM3P40198 252 aa13.7□□□□□ -0.22
SHOX-204ENST00000554971 ERVFC1-1P60608 527 aa13.7□□□□□ -0.22
SHOX-204ENST00000554971 CENPWQ5EE01 88 aa13.7□□□□□ -0.22
SHOX-204ENST00000554971 NPIPB3Q92617 1050 aa13.7□□□□□ -0.22
SHOX-204ENST00000554971 SRSF8Q9BRL6 282 aaKnown RBP13.7□□□□□ -0.22
SHOX-204ENST00000554971 SLC25A2Q9BXI2 301 aa13.7□□□□□ -0.22
SHOX-204ENST00000554971 FNDC4Q9H6D8 234 aaPredicted RBP13.7□□□□□ -0.22
SHOX-204ENST00000554971 IGHV1-3A0A0C4DH29 117 aa13.69□□□□□ -0.22
SHOX-204ENST00000554971 H3BUX3 64 aa13.69□□□□□ -0.22
SHOX-204ENST00000554971 TCF21O43680 179 aa13.69□□□□□ -0.22
SHOX-204ENST00000554971 GATA2P23769 480 aaPredicted RBP13.69□□□□□ -0.22
SHOX-204ENST00000554971 SUMO1P63165 101 aaKnown RBP13.69□□□□□ -0.22
SHOX-204ENST00000554971 GBGT1Q8N5D6 347 aa13.69□□□□□ -0.22
SHOX-204ENST00000554971 TRGV9Q99603 122 aa13.69□□□□□ -0.22
SHOX-204ENST00000554971 TNFRSF19Q9NS68 423 aa13.69□□□□□ -0.22
SHOX-204ENST00000554971 V9GYV3 84 aa13.69□□□□□ -0.22
SHOX-204ENST00000554971 GGTLC3B5MD39 225 aa13.68□□□□□ -0.22
SHOX-204ENST00000554971 TSTD3H0UI37 97 aa13.68□□□□□ -0.22
SHOX-204ENST00000554971 TIMM23O14925 209 aa13.68□□□□□ -0.22
SHOX-204ENST00000554971 MT-ND6P03923 174 aa13.68□□□□□ -0.22
SHOX-204ENST00000554971 RPL27AP46776 148 aaKnown RBP13.68□□□□□ -0.22
SHOX-204ENST00000554971 MRGPRG-AS1Q2M3A8 158 aa13.68□□□□□ -0.22
SHOX-204ENST00000554971 WDR73Q6P4I2 378 aa13.68□□□□□ -0.22
SHOX-204ENST00000554971 GNB1LQ9BYB4 327 aa13.68□□□□□ -0.22
SHOX-204ENST00000554971 IGKV1D-37A0A075B6S9 117 aa13.68□□□□□ -0.22
SHOX-204ENST00000554971 IGLC7A0M8Q6 106 aa13.68□□□□□ -0.22
SHOX-204ENST00000554971 OOSP1A8MZH6 123 aa13.68□□□□□ -0.22
SHOX-204ENST00000554971 UBE2L3P68036 154 aaKnown RBP13.68□□□□□ -0.22
SHOX-204ENST00000554971 TMEM116Q8NCL8 245 aa13.68□□□□□ -0.22
SHOX-204ENST00000554971 OR5AU1Q8NGC0 362 aa13.68□□□□□ -0.22
SHOX-204ENST00000554971 PAXXQ9BUH6 204 aa13.68□□□□□ -0.22
SHOX-204ENST00000554971 GZMBP10144 247 aa13.67□□□□□ -0.22
SHOX-204ENST00000554971 ZNF355PQ9NSJ1 428 aa13.67□□□□□ -0.22
SHOX-204ENST00000554971 SIGLEC9Q9Y336 463 aa13.67□□□□□ -0.22
SHOX-204ENST00000554971 IGHV3-72A0A0B4J1Y9 119 aa13.66□□□□□ -0.22
SHOX-204ENST00000554971 PLP1P60201 277 aa13.66□□□□□ -0.22
SHOX-204ENST00000554971 CCDC144NLQ6NUI1 221 aa13.66□□□□□ -0.22
SHOX-204ENST00000554971 SMIM12Q96EX1 92 aa13.66□□□□□ -0.22
SHOX-204ENST00000554971 IGF2BP2-AS1Q96M15 143 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms