RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 GBGT1Q8N5D6 347 aa11.66□□□□□ -0.54
CHMP1A-206ENST00000549139 GLMPQ8WWB7 406 aa11.66□□□□□ -0.54
CHMP1A-206ENST00000549139 MS4A6AQ9H2W1 248 aa11.66□□□□□ -0.54
CHMP1A-206ENST00000549139 MGAT4CQ9UBM8 478 aa11.66□□□□□ -0.54
CHMP1A-206ENST00000549139 UBQLN2Q9UHD9 624 aa11.66□□□□□ -0.54
CHMP1A-206ENST00000549139 SMCO3A2RU48 225 aa11.65□□□□□ -0.54
CHMP1A-206ENST00000549139 HELTA6NFD8 242 aa11.65□□□□□ -0.54
CHMP1A-206ENST00000549139 FAM24AA6NFZ4 105 aa11.65□□□□□ -0.54
CHMP1A-206ENST00000549139 DNASE2O00115 360 aaPredicted RBP11.65□□□□□ -0.54
CHMP1A-206ENST00000549139 DEDDO75618 318 aa11.65□□□□□ -0.54
CHMP1A-206ENST00000549139 NUP62P37198 522 aaPredicted RBP11.65□□□□□ -0.54
CHMP1A-206ENST00000549139 TFPI2P48307 235 aa11.65□□□□□ -0.54
CHMP1A-206ENST00000549139 CAV2P51636 162 aa11.65□□□□□ -0.54
CHMP1A-206ENST00000549139 RRAS2P62070 204 aaPredicted RBP11.65□□□□□ -0.54
CHMP1A-206ENST00000549139 ODF3L2Q3SX64 289 aa11.65□□□□□ -0.54
CHMP1A-206ENST00000549139 BPIFCQ8NFQ6 507 aa11.65□□□□□ -0.54
CHMP1A-206ENST00000549139 PBDC1Q9BVG4 233 aa11.65□□□□□ -0.54
CHMP1A-206ENST00000549139 LYRM2Q9NU23 88 aaPredicted RBP11.65□□□□□ -0.54
CHMP1A-206ENST00000549139 HECTD4Q9Y4D8 3996 aa11.65□□□□□ -0.55
CHMP1A-206ENST00000549139 SSNA1O43805 119 aa11.64□□□□□ -0.55
CHMP1A-206ENST00000549139 RLN2P04090 185 aa11.64□□□□□ -0.55
CHMP1A-206ENST00000549139 LYZP61626 148 aa11.64□□□□□ -0.55
CHMP1A-206ENST00000549139 TMEM182Q6ZP80 229 aaPredicted RBP11.64□□□□□ -0.55
CHMP1A-206ENST00000549139 CYP2G1PQ6ZSU1 146 aa11.64□□□□□ -0.55
CHMP1A-206ENST00000549139 WFDC3Q8IUB2 231 aa11.64□□□□□ -0.55
CHMP1A-206ENST00000549139 TMEM252Q8N6L7 170 aa11.64□□□□□ -0.55
CHMP1A-206ENST00000549139 GATA2P23769 480 aaPredicted RBP11.63□□□□□ -0.55
CHMP1A-206ENST00000549139 H2BFSP57053 126 aa11.63□□□□□ -0.55
CHMP1A-206ENST00000549139 SELENOTP62341 195 aa11.63□□□□□ -0.55
CHMP1A-206ENST00000549139 C1orf194Q5T5A4 169 aa11.63□□□□□ -0.55
CHMP1A-206ENST00000549139 TEPPQ6URK8 271 aa11.63□□□□□ -0.55
CHMP1A-206ENST00000549139 SLC45A2Q9UMX9 530 aa11.63□□□□□ -0.55
CHMP1A-206ENST00000549139 LOC102724200A0A096LPH7 203 aaPredicted RBP11.62□□□□□ -0.55
CHMP1A-206ENST00000549139 K7EQG2 157 aa11.62□□□□□ -0.55
CHMP1A-206ENST00000549139 CST7O76096 145 aa11.62□□□□□ -0.55
CHMP1A-206ENST00000549139 S100A11P31949 105 aa11.62□□□□□ -0.55
CHMP1A-206ENST00000549139 SULT1A1P50225 295 aa11.62□□□□□ -0.55
CHMP1A-206ENST00000549139 PLP1P60201 277 aa11.62□□□□□ -0.55
CHMP1A-206ENST00000549139 SLC38A11Q08AI6 406 aa11.62□□□□□ -0.55
CHMP1A-206ENST00000549139 SIGLEC15Q6ZMC9 328 aa11.62□□□□□ -0.55
CHMP1A-206ENST00000549139 STPG3Q8N7X2 389 aa11.62□□□□□ -0.55
CHMP1A-206ENST00000549139 STXBP6Q8NFX7 210 aa11.62□□□□□ -0.55
CHMP1A-206ENST00000549139 DCANP1Q8TF63 244 aa11.62□□□□□ -0.55
CHMP1A-206ENST00000549139 ALG5Q9Y673 324 aa11.62□□□□□ -0.55
CHMP1A-206ENST00000549139 IGSF23A1L1A6 192 aa11.61□□□□□ -0.55
CHMP1A-206ENST00000549139 E5RGE8 158 aa11.61□□□□□ -0.55
CHMP1A-206ENST00000549139 LY6G6CO95867 125 aa11.61□□□□□ -0.55
CHMP1A-206ENST00000549139 S100A7P31151 101 aa11.61□□□□□ -0.55
CHMP1A-206ENST00000549139 STX12Q86Y82 276 aa11.61□□□□□ -0.55
CHMP1A-206ENST00000549139 GGTLC1Q9BX51 225 aa11.61□□□□□ -0.55
CHMP1A-206ENST00000549139 MAP6D1Q9H9H5 199 aa11.61□□□□□ -0.55
CHMP1A-206ENST00000549139 FBXL17Q9UF56 701 aa11.61□□□□□ -0.55
CHMP1A-206ENST00000549139 H0YIZ8 118 aa11.6□□□□□ -0.55
CHMP1A-206ENST00000549139 ORM2P19652 201 aa11.6□□□□□ -0.55
CHMP1A-206ENST00000549139 HBG1P69891 147 aa11.6□□□□□ -0.55
CHMP1A-206ENST00000549139 HBG2P69892 147 aa11.6□□□□□ -0.55
CHMP1A-206ENST00000549139 ATP6V1FQ16864 119 aa11.6□□□□□ -0.55
CHMP1A-206ENST00000549139 VWC2Q2TAL6 325 aa11.6□□□□□ -0.55
CHMP1A-206ENST00000549139 LRRC37A5PQ49AS3 106 aa11.6□□□□□ -0.55
CHMP1A-206ENST00000549139 APRG1Q8IVJ8 170 aa11.6□□□□□ -0.55
CHMP1A-206ENST00000549139 TMEM217Q8N7C4 229 aa11.6□□□□□ -0.55
CHMP1A-206ENST00000549139 PPP1R1CQ8WVI7 109 aa11.6□□□□□ -0.55
CHMP1A-206ENST00000549139 PPP1R14BQ96C90 147 aa11.6□□□□□ -0.55
CHMP1A-206ENST00000549139 SLC25A31Q9H0C2 315 aa11.6□□□□□ -0.55
CHMP1A-206ENST00000549139 SEPSECSQ9HD40 501 aaKnown RBP11.6□□□□□ -0.55
CHMP1A-206ENST00000549139 OR5AC2Q9NZP5 309 aa11.6□□□□□ -0.55
CHMP1A-206ENST00000549139 AGRNO00468 2067 aa11.59□□□□□ -0.55
CHMP1A-206ENST00000549139 VPS13DQ5THJ4 4388 aa11.59□□□□□ -0.55
CHMP1A-206ENST00000549139 AGPAT2O15120 278 aa11.59□□□□□ -0.55
CHMP1A-206ENST00000549139 DEFB131AP59861 70 aa11.59□□□□□ -0.55
CHMP1A-206ENST00000549139 FAM24BQ8N5W8 94 aa11.59□□□□□ -0.55
CHMP1A-206ENST00000549139 OR1B1Q8NGR6 318 aa11.59□□□□□ -0.55
CHMP1A-206ENST00000549139 RNF126Q9BV68 326 aa11.59□□□□□ -0.55
CHMP1A-206ENST00000549139 TMEM147Q9BVK8 224 aa11.59□□□□□ -0.55
CHMP1A-206ENST00000549139 NRN1Q9NPD7 142 aa11.59□□□□□ -0.55
CHMP1A-206ENST00000549139 UQCC1Q9NVA1 299 aa11.59□□□□□ -0.55
CHMP1A-206ENST00000549139 ZNF98A6NK75 572 aa11.58□□□□□ -0.56
CHMP1A-206ENST00000549139 HYPMO75409 117 aa11.58□□□□□ -0.56
CHMP1A-206ENST00000549139 MPC2O95563 127 aa11.58□□□□□ -0.56
CHMP1A-206ENST00000549139 LINC00869P0C866 280 aa11.58□□□□□ -0.56
CHMP1A-206ENST00000549139 RAB31Q13636 194 aa11.58□□□□□ -0.56
CHMP1A-206ENST00000549139 RGS21Q2M5E4 152 aa11.58□□□□□ -0.56
CHMP1A-206ENST00000549139 PXDC1Q5TGL8 231 aa11.58□□□□□ -0.56
CHMP1A-206ENST00000549139 ZNF546Q86UE3 836 aa11.58□□□□□ -0.56
CHMP1A-206ENST00000549139 OR8I2Q8N0Y5 310 aa11.58□□□□□ -0.56
CHMP1A-206ENST00000549139 WDR83OSQ9Y284 106 aa11.58□□□□□ -0.56
CHMP1A-206ENST00000549139 KIR2DL5BA0A0G2JN68 375 aa11.57□□□□□ -0.56
CHMP1A-206ENST00000549139 KIR2DL5BA0A0G2JPC4 375 aa11.57□□□□□ -0.56
CHMP1A-206ENST00000549139 PET100P0DJ07 73 aa11.57□□□□□ -0.56
CHMP1A-206ENST00000549139 APOC4P55056 127 aa11.57□□□□□ -0.56
CHMP1A-206ENST00000549139 RAP2BP61225 183 aa11.57□□□□□ -0.56
CHMP1A-206ENST00000549139 EWSR1Q01844 656 aaKnown RBP eCLIP11.57□□□□□ -0.56
CHMP1A-206ENST00000549139 NHLH2Q02577 135 aa11.57□□□□□ -0.56
CHMP1A-206ENST00000549139 ZNF124Q15973 351 aa11.57□□□□□ -0.56
CHMP1A-206ENST00000549139 S100A7AQ86SG5 101 aa11.57□□□□□ -0.56
CHMP1A-206ENST00000549139 KIR2DL5AQ8N109 375 aa11.57□□□□□ -0.56
CHMP1A-206ENST00000549139 KIR2DL5BQ8NHK3 375 aa11.57□□□□□ -0.56
CHMP1A-206ENST00000549139 MGST2Q99735 147 aa11.57□□□□□ -0.56
CHMP1A-206ENST00000549139 MED28Q9H204 178 aa11.57□□□□□ -0.56
CHMP1A-206ENST00000549139 HIGD1AQ9Y241 93 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms