RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 CRYBB3P26998 211 aa12.27□□□□□ -0.45
PRPF40A-212ENST00000545856 LYZP61626 148 aa12.27□□□□□ -0.45
PRPF40A-212ENST00000545856 C1orf194Q5T5A4 169 aa12.27□□□□□ -0.45
PRPF40A-212ENST00000545856 C10orf113Q5VZT2 155 aa12.27□□□□□ -0.45
PRPF40A-212ENST00000545856 ZNF767PQ75MW2 155 aa12.27□□□□□ -0.45
PRPF40A-212ENST00000545856 STXBP6Q8NFX7 210 aa12.27□□□□□ -0.45
PRPF40A-212ENST00000545856 RNF141Q8WVD5 230 aa12.27□□□□□ -0.45
PRPF40A-212ENST00000545856 TMED6Q8WW62 240 aa12.27□□□□□ -0.45
PRPF40A-212ENST00000545856 GPR82Q96P67 336 aa12.27□□□□□ -0.45
PRPF40A-212ENST00000545856 SIGLEC8Q9NYZ4 499 aa12.27□□□□□ -0.45
PRPF40A-212ENST00000545856 M0QZ24 198 aa12.26□□□□□ -0.45
PRPF40A-212ENST00000545856 NPPCP23582 126 aa12.26□□□□□ -0.45
PRPF40A-212ENST00000545856 TAS2R45P59539 299 aa12.26□□□□□ -0.45
PRPF40A-212ENST00000545856 TMEM182Q6ZP80 229 aaPredicted RBP12.26□□□□□ -0.45
PRPF40A-212ENST00000545856 GRAMD2BQ96HH9 432 aa12.26□□□□□ -0.45
PRPF40A-212ENST00000545856 ZNF414Q96IQ9 312 aa12.26□□□□□ -0.45
PRPF40A-212ENST00000545856 TECRQ9NZ01 308 aaKnown RBP12.26□□□□□ -0.45
PRPF40A-212ENST00000545856 A0A1W2PPV4 95 aa12.25□□□□□ -0.45
PRPF40A-212ENST00000545856 ORM2P19652 201 aa12.25□□□□□ -0.45
PRPF40A-212ENST00000545856 GATA2P23769 480 aaPredicted RBP12.25□□□□□ -0.45
PRPF40A-212ENST00000545856 USF2Q15853 346 aaPredicted RBP12.25□□□□□ -0.45
PRPF40A-212ENST00000545856 NSUN5P1Q3KNT7 163 aa12.25□□□□□ -0.45
PRPF40A-212ENST00000545856 C18orf65Q6ZTR6 163 aa12.25□□□□□ -0.45
PRPF40A-212ENST00000545856 ZNF680Q8NEM1 530 aa12.25□□□□□ -0.45
PRPF40A-212ENST00000545856 OR10G4Q8NGN3 311 aa12.25□□□□□ -0.45
PRPF40A-212ENST00000545856 OR10G9Q8NGN4 311 aa12.25□□□□□ -0.45
PRPF40A-212ENST00000545856 OR10G7Q8NGN6 311 aa12.25□□□□□ -0.45
PRPF40A-212ENST00000545856 OR1B1Q8NGR6 318 aa12.25□□□□□ -0.45
PRPF40A-212ENST00000545856 TMEM37Q8WXS4 190 aa12.25□□□□□ -0.45
PRPF40A-212ENST00000545856 SAT2Q96F10 170 aaPredicted RBP12.25□□□□□ -0.45
PRPF40A-212ENST00000545856 SHANK2-AS3Q9BTD1 123 aa12.25□□□□□ -0.45
PRPF40A-212ENST00000545856 ELOVL1Q9BW60 279 aa12.25□□□□□ -0.45
PRPF40A-212ENST00000545856 ACTR3CQ9C0K3 210 aaPredicted RBP12.25□□□□□ -0.45
PRPF40A-212ENST00000545856 FUT9Q9Y231 359 aa12.25□□□□□ -0.45
PRPF40A-212ENST00000545856 U3KQE9 123 aa12.25□□□□□ -0.45
PRPF40A-212ENST00000545856 ANK2Q01484 3957 aa12.24□□□□□ -0.45
PRPF40A-212ENST00000545856 CTXND1A0A1B0GTU2 59 aa12.24□□□□□ -0.45
PRPF40A-212ENST00000545856 A0A1W2PRX2 142 aa12.24□□□□□ -0.45
PRPF40A-212ENST00000545856 H3BRN7 92 aa12.24□□□□□ -0.45
PRPF40A-212ENST00000545856 TEX46H3BTG2 121 aa12.24□□□□□ -0.45
PRPF40A-212ENST00000545856 PF4P02776 101 aa12.24□□□□□ -0.45
PRPF40A-212ENST00000545856 C8orf88P0DMB2 117 aa12.24□□□□□ -0.45
PRPF40A-212ENST00000545856 MEOX2P50222 304 aa12.24□□□□□ -0.45
PRPF40A-212ENST00000545856 DEFB136Q30KP8 78 aa12.24□□□□□ -0.45
PRPF40A-212ENST00000545856 OR9G4Q8NGQ1 327 aa12.24□□□□□ -0.45
PRPF40A-212ENST00000545856 RCC1LQ96I51 464 aaKnown RBP12.24□□□□□ -0.45
PRPF40A-212ENST00000545856 PBDC1Q9BVG4 233 aa12.24□□□□□ -0.45
PRPF40A-212ENST00000545856 RPRMQ9NS64 109 aa12.24□□□□□ -0.45
PRPF40A-212ENST00000545856 UBQLN2Q9UHD9 624 aa12.24□□□□□ -0.45
PRPF40A-212ENST00000545856 ZNF320A2RRD8 509 aa12.23□□□□□ -0.45
PRPF40A-212ENST00000545856 CDC34P49427 236 aaPredicted RBP12.23□□□□□ -0.45
PRPF40A-212ENST00000545856 BLOC1S1P78537 153 aa12.23□□□□□ -0.45
PRPF40A-212ENST00000545856 KHDC3LQ587J8 217 aa12.23□□□□□ -0.45
PRPF40A-212ENST00000545856 FAM78BQ5VT40 261 aa12.23□□□□□ -0.45
PRPF40A-212ENST00000545856 UNQ9165/PRO28630Q6UXU0 137 aa12.23□□□□□ -0.45
PRPF40A-212ENST00000545856 LINC00305Q7Z4B0 112 aa12.23□□□□□ -0.45
PRPF40A-212ENST00000545856 C20orf24Q9BUV8 137 aa12.23□□□□□ -0.45
PRPF40A-212ENST00000545856 SLC25A39Q9BZJ4 359 aaPredicted RBP12.23□□□□□ -0.45
PRPF40A-212ENST00000545856 IGHV7-4-1A0A0J9YVY3 117 aa12.22□□□□□ -0.45
PRPF40A-212ENST00000545856 TMEM213A2RRL7 107 aa12.22□□□□□ -0.45
PRPF40A-212ENST00000545856 OVOL1O14753 267 aa12.22□□□□□ -0.45
PRPF40A-212ENST00000545856 RPL7P18124 248 aaKnown RBP12.22□□□□□ -0.45
PRPF40A-212ENST00000545856 SYNJ2BPP57105 145 aa12.22□□□□□ -0.45
PRPF40A-212ENST00000545856 RAB2AP61019 212 aa12.22□□□□□ -0.45
PRPF40A-212ENST00000545856 SAMD13Q5VXD3 122 aa12.22□□□□□ -0.45
PRPF40A-212ENST00000545856 PATE2Q6UY27 113 aa12.22□□□□□ -0.45
PRPF40A-212ENST00000545856 PQLC2Q6ZP29 291 aa12.22□□□□□ -0.45
PRPF40A-212ENST00000545856 RPP25LQ8N5L8 163 aaKnown RBP12.22□□□□□ -0.45
PRPF40A-212ENST00000545856 VSIRQ9H7M9 311 aa12.22□□□□□ -0.45
PRPF40A-212ENST00000545856 TRAV1-1A0A0B4J248 108 aa12.21□□□□□ -0.45
PRPF40A-212ENST00000545856 IGHV3-35A0A0C4DH35 117 aa12.21□□□□□ -0.45
PRPF40A-212ENST00000545856 HELTA6NFD8 242 aa12.21□□□□□ -0.45
PRPF40A-212ENST00000545856 ZNF98A6NK75 572 aa12.21□□□□□ -0.45
PRPF40A-212ENST00000545856 RGS13O14921 159 aa12.21□□□□□ -0.45
PRPF40A-212ENST00000545856 BUB3O43684 328 aa12.21□□□□□ -0.45
PRPF40A-212ENST00000545856 HBE1P02100 147 aa12.21□□□□□ -0.45
PRPF40A-212ENST00000545856 SLURP1P55000 103 aa12.21□□□□□ -0.45
PRPF40A-212ENST00000545856 ALKAL2Q6UX46 152 aa12.21□□□□□ -0.45
PRPF40A-212ENST00000545856 BPIFA4PQ86YQ2 179 aa12.21□□□□□ -0.45
PRPF40A-212ENST00000545856 MCRIP2Q9BUT9 160 aaKnown RBP12.21□□□□□ -0.45
PRPF40A-212ENST00000545856 TMEM14CQ9P0S9 112 aa12.21□□□□□ -0.45
PRPF40A-212ENST00000545856 SMPXQ9UHP9 88 aa12.21□□□□□ -0.45
PRPF40A-212ENST00000545856 C2orf70A6NJV1 201 aa12.2□□□□□ -0.46
PRPF40A-212ENST00000545856 STAG3L2P0CL84 134 aa12.2□□□□□ -0.46
PRPF40A-212ENST00000545856 STAG3L3P0CL85 134 aa12.2□□□□□ -0.46
PRPF40A-212ENST00000545856 INSL3P51460 131 aa12.2□□□□□ -0.46
PRPF40A-212ENST00000545856 LINC00482Q8N8I6 264 aa12.2□□□□□ -0.46
PRPF40A-212ENST00000545856 MBD3L1Q8WWY6 194 aa12.2□□□□□ -0.46
PRPF40A-212ENST00000545856 DLX4Q92988 240 aaPredicted RBP12.2□□□□□ -0.46
PRPF40A-212ENST00000545856 GPR61Q9BZJ8 451 aa12.2□□□□□ -0.46
PRPF40A-212ENST00000545856 DOK5Q9P104 306 aa12.2□□□□□ -0.46
PRPF40A-212ENST00000545856 VWFP04275 2813 aa12.2□□□□□ -0.46
PRPF40A-212ENST00000545856 PPT1P50897 306 aa12.19□□□□□ -0.46
PRPF40A-212ENST00000545856 GCSAMLQ5JQS6 135 aa12.19□□□□□ -0.46
PRPF40A-212ENST00000545856 OR2K2Q8NGT1 345 aa12.19□□□□□ -0.46
PRPF40A-212ENST00000545856 RAB24Q969Q5 203 aa12.19□□□□□ -0.46
PRPF40A-212ENST00000545856 SEPSECSQ9HD40 501 aaKnown RBP12.19□□□□□ -0.46
PRPF40A-212ENST00000545856 CXorf1O96002 111 aa12.18□□□□□ -0.46
PRPF40A-212ENST00000545856 H2AFB1P0C5Y9 115 aa12.18□□□□□ -0.46
PRPF40A-212ENST00000545856 CBLN1P23435 193 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms