RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, humanhuman

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-205ENST00000544506 MAGI2Q86UL8 1455 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 RALGAPBQ86X10 1494 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 TMEM131LA2VDJ0 1609 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 LAMC1P11047 1609 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 CC2D2AQ9P2K1 1620 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 BIVM-ERCC5R4GMW8 1640 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 A0A1B0GUL6 1792 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 AKAP11Q9UKA4 1901 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 IGKV3-7A0A075B6H7 116 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 A0A0D9SG52 128 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 F6UZH7 168 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 GNGT2O14610 69 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 SLC16A4O15374 487 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 ARPC5O15511 151 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 CYB5BO43169 146 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 OR2T1O43869 369 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 PDE6DO43924 150 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 OR2J2O76002 312 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 ATG12O94817 140 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 CEP152O94986 1710 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 TNFSF15O95150 251 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 CST2P09228 141 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 RPS3P23396 243 aaKnown RBP eCLIP1.19□□□□□ -2.22
LEMD3-205ENST00000544506 NFYAP23511 347 aaPredicted RBP1.19□□□□□ -2.22
LEMD3-205ENST00000544506 SDC2P34741 201 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 MAP2K4P45985 399 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 ARPP19P56211 112 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 PIGPP57054 158 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 HIST1H4AP62805 103 aaKnown RBP1.19□□□□□ -2.22
LEMD3-205ENST00000544506 EMX1Q04741 257 aaPredicted RBP1.19□□□□□ -2.22
LEMD3-205ENST00000544506 ABCC8Q09428 1581 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 IQCJQ1A5X6 159 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 SMIM21Q3B7S5 101 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 ARHGAP11BQ3KRB8 267 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 RIC1Q4ADV7 1423 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 SCGB2B2Q4G0G5 96 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 ACSM3Q53FZ2 586 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 TTC37Q6PGP7 1564 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 GTF2H5Q6ZYL4 71 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 TRAPPC5Q8IUR0 188 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 C9orf62Q8N4C0 152 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 TMEM161BQ8NDZ6 487 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 PXT1Q8NFP0 134 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 TSTD1Q8NFU3 115 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 OR4E2Q8NGC2 313 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 OR2T27Q8NH04 317 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 PIGXQ8TBF5 258 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 HAVCR2Q8TDQ0 301 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 LCN9Q8WX39 176 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 C11orf40Q8WZ69 217 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 ROPN1LQ96C74 230 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 BTF3L4Q96K17 158 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 LINC00052Q96N35 136 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 LXNQ9BS40 222 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 SEC11CQ9BY50 192 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 PARD6GQ9BYG4 376 aaPredicted RBP1.19□□□□□ -2.22
LEMD3-205ENST00000544506 ZFP30Q9Y2G7 519 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 PBRM1Q86U86 1689 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 HMGXB3Q12766 1538 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 LRRC7Q96NW7 1537 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 ARHGEF12Q9NZN5 1544 aa1.19□□□□□ -2.22
LEMD3-205ENST00000544506 TRPM1Q7Z4N2 1603 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 MED14O60244 1454 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 ATP10BO94823 1461 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 ERVK-7P63135 1459 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 NEO1Q92859 1461 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 MLH3Q9UHC1 1453 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 BCORL1Q5H9F3 1711 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 HECW2Q9P2P5 1572 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 LAMC3Q9Y6N6 1575 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 DCCP43146 1447 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 TRAV30A0A087WSZ9 112 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 KANTRA0A1W2PQU2 76 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 NAP1L6A6NFF2 107 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 BBIP1A8MTZ0 92 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 PPP5D1E7EU14 171 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 INMT-MINDY4F8WBC2 141 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 CXCR6O00574 342 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 IFNA5P01569 189 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 NBEAP1P0C6P0 100 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 UBBP0CG47 229 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 KCNE1P15382 129 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 CMPK1P30085 196 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 TCTAP57738 103 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 DNAJB13P59910 316 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 CKS1BP61024 79 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 SNRPD2P62316 118 aaKnown RBP1.18□□□□□ -2.22
LEMD3-205ENST00000544506 UBA52P62987 128 aaKnown RBP1.18□□□□□ -2.22
LEMD3-205ENST00000544506 CCL7P80098 99 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 DCDP81605 110 aaKnown RBP1.18□□□□□ -2.22
LEMD3-205ENST00000544506 H3F3AP84243 136 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 AESQ08117 197 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 SRSF6Q13247 344 aaKnown RBP1.18□□□□□ -2.22
LEMD3-205ENST00000544506 CDK5R1Q15078 307 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 SAMD13Q5VXD3 122 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 SMIM5Q71RC9 77 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 Q8N402 240 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 RPP25LQ8N5L8 163 aaKnown RBP1.18□□□□□ -2.22
LEMD3-205ENST00000544506 TMEM156Q8N614 296 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 CLDN22Q8N7P3 220 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms