RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 SPANXCQ9NY87 97 aa7.21□□□□□ -1.26
VPS13D-212ENST00000543766 COA3Q9Y2R0 106 aaPredicted RBP7.21□□□□□ -1.26
VPS13D-212ENST00000543766 HEATR5BQ9P2D3 2071 aa7.21□□□□□ -1.26
VPS13D-212ENST00000543766 SCN2AQ99250 2005 aa7.21□□□□□ -1.26
VPS13D-212ENST00000543766 TRGV11A0A075B6L2 103 aa7.21□□□□□ -1.26
VPS13D-212ENST00000543766 C5orf63A6NC05 138 aa7.21□□□□□ -1.26
VPS13D-212ENST00000543766 IGHMP01871 453 aa7.21□□□□□ -1.26
VPS13D-212ENST00000543766 YPEL3P61236 119 aaPredicted RBP7.21□□□□□ -1.26
VPS13D-212ENST00000543766 PRR26Q8N8Z3 221 aa7.21□□□□□ -1.26
VPS13D-212ENST00000543766 ZPLD1Q8TCW7 415 aa7.21□□□□□ -1.26
VPS13D-212ENST00000543766 FXYD5Q96DB9 178 aa7.21□□□□□ -1.26
VPS13D-212ENST00000543766 AICDAQ9GZX7 198 aa7.21□□□□□ -1.26
VPS13D-212ENST00000543766 OCIAD1Q9NX40 245 aa7.21□□□□□ -1.26
VPS13D-212ENST00000543766 C17orf100A8MU93 164 aa7.2□□□□□ -1.26
VPS13D-212ENST00000543766 GYPAP02724 150 aa7.2□□□□□ -1.26
VPS13D-212ENST00000543766 CENPWQ5EE01 88 aa7.2□□□□□ -1.26
VPS13D-212ENST00000543766 FAM90A2PQ658T7 463 aa7.2□□□□□ -1.26
VPS13D-212ENST00000543766 LINC00114Q6XXX2 140 aa7.2□□□□□ -1.26
VPS13D-212ENST00000543766 C9orf139Q6ZV77 190 aa7.2□□□□□ -1.26
VPS13D-212ENST00000543766 ZNF584Q8IVC4 421 aa7.2□□□□□ -1.26
VPS13D-212ENST00000543766 LINC00311Q8N616 119 aa7.2□□□□□ -1.26
VPS13D-212ENST00000543766 FAM19A4Q96LR4 140 aa7.2□□□□□ -1.26
VPS13D-212ENST00000543766 SCGB1C2P0DMR2 95 aa7.2□□□□□ -1.26
VPS13D-212ENST00000543766 PTPRSQ13332 1948 aa7.2□□□□□ -1.26
VPS13D-212ENST00000543766 TRAV41A0A0B4J266 112 aa7.2□□□□□ -1.26
VPS13D-212ENST00000543766 QRFPP83859 136 aa7.2□□□□□ -1.26
VPS13D-212ENST00000543766 TCF15Q12870 199 aa7.2□□□□□ -1.26
VPS13D-212ENST00000543766 C1orf100Q5SVJ3 147 aa7.2□□□□□ -1.26
VPS13D-212ENST00000543766 RPS19BP1Q86WX3 136 aaKnown RBP7.2□□□□□ -1.26
VPS13D-212ENST00000543766 BCL6BQ8N143 479 aaPredicted RBP7.2□□□□□ -1.26
VPS13D-212ENST00000543766 OR11H6Q8NGC7 330 aa7.2□□□□□ -1.26
VPS13D-212ENST00000543766 LINC00527Q9UJ94 153 aa7.2□□□□□ -1.26
VPS13D-212ENST00000543766 PRRC2BQ5JSZ5 2229 aaKnown RBP7.2□□□□□ -1.26
VPS13D-212ENST00000543766 FANCMQ8IYD8 2048 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 PYYP10082 97 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 RPL23P62829 140 aaKnown RBP7.19□□□□□ -1.26
VPS13D-212ENST00000543766 Q0VG73 95 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 NFE4Q86UQ8 179 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 TSKUQ8WUA8 353 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 ZNF286AQ9HBT8 521 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 EPDR1Q9UM22 224 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 CHD9Q3L8U1 2897 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 TRAV8-4A0A0B4J246 113 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 ZNF117Q03924 483 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 ANKRD37Q7Z713 158 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 CIARTQ8N365 385 aaPredicted RBP7.19□□□□□ -1.26
VPS13D-212ENST00000543766 RNF182Q8N6D2 247 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 GVQW1Q8N7I0 195 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 ZNF721Q8TF20 911 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 FMC1Q96HJ9 113 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 C11orf1Q9H5F2 150 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 HHLA3Q9XRX5 114 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 CACNA1CQ13936 2221 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 FER1L5A0AVI2 2057 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 A0A1B0GTH9 108 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 K7ESM1 405 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 MRPL2Q5T653 305 aaKnown RBP7.19□□□□□ -1.26
VPS13D-212ENST00000543766 ZAR1Q86SH2 424 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 CEND1Q8N111 149 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 CLDND2Q8NHS1 167 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 ZNF689Q96CS4 500 aaPredicted RBP7.19□□□□□ -1.26
VPS13D-212ENST00000543766 C19orf25Q9UFG5 118 aaPredicted RBP7.19□□□□□ -1.26
VPS13D-212ENST00000543766 TP53TG3Q9ULZ0 132 aa7.19□□□□□ -1.26
VPS13D-212ENST00000543766 PLCE1Q9P212 2302 aa7.18□□□□□ -1.26
VPS13D-212ENST00000543766 TRAV26-2A0A0B4J265 109 aa7.18□□□□□ -1.26
VPS13D-212ENST00000543766 BCL2P10415 239 aa7.18□□□□□ -1.26
VPS13D-212ENST00000543766 SUB1P53999 127 aaKnown RBP eCLIP7.18□□□□□ -1.26
VPS13D-212ENST00000543766 CACNG7P62955 275 aa7.18□□□□□ -1.26
VPS13D-212ENST00000543766 NSUN5P1Q3KNT7 163 aa7.18□□□□□ -1.26
VPS13D-212ENST00000543766 CNRIP1Q96F85 164 aaPredicted RBP7.18□□□□□ -1.26
VPS13D-212ENST00000543766 C4orf45Q96LM5 186 aa7.18□□□□□ -1.26
VPS13D-212ENST00000543766 A0A0A0MQY5 61 aa7.18□□□□□ -1.26
VPS13D-212ENST00000543766 C3orf85A0A1B0GTC6 90 aa7.18□□□□□ -1.26
VPS13D-212ENST00000543766 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.18□□□□□ -1.26
VPS13D-212ENST00000543766 TRAPPC6BQ86SZ2 158 aa7.18□□□□□ -1.26
VPS13D-212ENST00000543766 ZNF503Q96F45 646 aa7.18□□□□□ -1.26
VPS13D-212ENST00000543766 C17orf77Q96MU5 243 aa7.18□□□□□ -1.26
VPS13D-212ENST00000543766 OR2A5Q96R48 311 aa7.18□□□□□ -1.26
VPS13D-212ENST00000543766 GPX7Q96SL4 187 aaPredicted RBP7.18□□□□□ -1.26
VPS13D-212ENST00000543766 HCSTQ9UBK5 93 aa7.18□□□□□ -1.26
VPS13D-212ENST00000543766 EXPH5Q8NEV8 1989 aa7.18□□□□□ -1.26
VPS13D-212ENST00000543766 SCN3AQ9NY46 2000 aa7.18□□□□□ -1.26
VPS13D-212ENST00000543766 PITX3O75364 302 aa7.18□□□□□ -1.26
VPS13D-212ENST00000543766 NCBP2P52298 156 aaKnown RBP eCLIP7.18□□□□□ -1.26
VPS13D-212ENST00000543766 KCTD18Q6PI47 426 aaPredicted RBP7.18□□□□□ -1.26
VPS13D-212ENST00000543766 DEFB123Q8N688 67 aa7.18□□□□□ -1.26
VPS13D-212ENST00000543766 FGF14Q92915 247 aa7.18□□□□□ -1.26
VPS13D-212ENST00000543766 TSACCQ96A04 125 aaPredicted RBP7.18□□□□□ -1.26
VPS13D-212ENST00000543766 VKORC1Q9BQB6 163 aa7.18□□□□□ -1.26
VPS13D-212ENST00000543766 PLA2G2FQ9BZM2 168 aa7.18□□□□□ -1.26
VPS13D-212ENST00000543766 OR2W1Q9Y3N9 320 aa7.18□□□□□ -1.26
VPS13D-212ENST00000543766 TMEM187Q14656 261 aa7.17□□□□□ -1.26
VPS13D-212ENST00000543766 AMN1Q8IY45 258 aa7.17□□□□□ -1.26
VPS13D-212ENST00000543766 DRAM1Q8N682 238 aa7.17□□□□□ -1.26
VPS13D-212ENST00000543766 FAM57AQ8TBR7 257 aa7.17□□□□□ -1.26
VPS13D-212ENST00000543766 IL1F10Q8WWZ1 152 aa7.17□□□□□ -1.26
VPS13D-212ENST00000543766 PTPRZ1P23471 2315 aaPredicted RBP7.17□□□□□ -1.26
VPS13D-212ENST00000543766 LRRK1Q38SD2 2015 aa7.17□□□□□ -1.26
VPS13D-212ENST00000543766 UPK2O00526 184 aa7.17□□□□□ -1.26
VPS13D-212ENST00000543766 SYNGR2O43760 224 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms