RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 THTPAQ9BU02 230 aa1.06□□□□□ -2.24
TRAV1-1-201ENST00000542354 FNDC11Q9BVV2 318 aa1.06□□□□□ -2.24
TRAV1-1-201ENST00000542354 PECRQ9BY49 303 aa1.06□□□□□ -2.24
TRAV1-1-201ENST00000542354 MIXL1Q9H2W2 232 aa1.06□□□□□ -2.24
TRAV1-1-201ENST00000542354 RIMS4Q9H426 269 aaPredicted RBP1.06□□□□□ -2.24
TRAV1-1-201ENST00000542354 SPACA1Q9HBV2 294 aa1.06□□□□□ -2.24
TRAV1-1-201ENST00000542354 GSN-AS1Q9NRJ2 163 aa1.06□□□□□ -2.24
TRAV1-1-201ENST00000542354 MGAT4AQ9UM21 535 aa1.06□□□□□ -2.24
TRAV1-1-201ENST00000542354 GMPPBQ9Y5P6 360 aa1.06□□□□□ -2.24
TRAV1-1-201ENST00000542354 A0A087WWC5 75 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 A0A087WX48 190 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 IGKV2D-26A0A0A0MRZ7 120 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 IGKV1-9A0A0C4DH69 117 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 LOC100131303A0A0U1RQF7 123 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 EVPLLA8MZ36 301 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 K7EPK0 472 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 SCGB2A1O75556 95 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 HPRT1P00492 218 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 CRPP02741 224 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 TPM3P06753 285 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 ABHD2P08910 425 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 PTHLHP12272 177 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 HLA-GP17693 338 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 SPI1P17947 270 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 SERPINA2P20848 420 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 CCL1P22362 96 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 POLR2JP52435 117 aaKnown RBP1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 GBX2P52951 348 aaPredicted RBP1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 MTPNP58546 118 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 FXYD6P3P58550 94 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 LYZP61626 148 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 UBE2HP62256 183 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 POLR2GP62487 172 aaKnown RBP eCLIP1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 MPV17LQ2QL34 196 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 Q6ZQT7 251 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 UTS2BQ765I0 119 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 GAPTQ8N292 157 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 FAM89BQ8N5H3 189 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 PXT1Q8NFP0 134 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 OR52N1Q8NH53 320 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 LHFPL5Q8TAF8 219 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 AGR3Q8TD06 166 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 PRRC1Q96M27 445 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 C20orf166-AS1Q96NR2 134 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 ZIM3Q96PE6 472 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 FMO2Q99518 471 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 COMMD5Q9GZQ3 224 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 PSMC3IPQ9P2W1 217 aaPredicted RBP1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 LAMP5Q9UJQ1 280 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 OR52A1Q9UKL2 312 aa1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 F11RQ9Y624 299 aaKnown RBP1.05□□□□□ -2.24
TRAV1-1-201ENST00000542354 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 GEMIN2O14893 280 aaKnown RBP1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 ZSCAN12O43309 604 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 GSTZ1O43708 216 aaPredicted RBP1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 TMEM50AO95807 157 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 MT-ND2P03891 347 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 GLAP06280 429 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 SNRPCP09234 159 aaKnown RBP1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 GPX2P18283 190 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 ORM2P19652 201 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 ALOX5APP20292 161 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 IL12AP29459 219 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 MNAT1P51948 309 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 SLC18A1P54219 525 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 RBM11P57052 281 aaKnown RBP1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 CXCR4P61073 352 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 HERV-K104P61576 105 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 TPM4P67936 248 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 SSX1Q16384 188 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 STX1AQ16623 288 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 MIAQ16674 131 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 NHLRC3Q5JS37 347 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 LINC01590Q5TEZ4 76 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 THOC7Q6I9Y2 204 aaKnown RBP1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 CGB2Q6NT52 195 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 ENHOQ6UWT2 76 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 RASSF6Q6ZTQ3 369 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 MSANTD1Q6ZTZ1 278 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 LHFPL3Q86UP9 236 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 C10orf67Q8IYJ2 551 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 ZNF679Q8IYX0 411 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 OFCC1Q8IZS5 231 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 VKORC1L1Q8N0U8 176 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 LGI3Q8N145 548 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 Q8N377 158 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 SLC37A3Q8NCC5 494 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 SPATA4Q8NEY3 305 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 FANK1Q8TC84 345 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 TAMM41Q96BW9 452 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 SDHCQ99643 169 aaPredicted RBP1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 SOSTQ9BQB4 213 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 SLC50A1Q9BRV3 221 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 CHCHD7Q9BUK0 85 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 UQCC1Q9NVA1 299 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 ANAPC11Q9NYG5 84 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 DCDC2Q9UHG0 476 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 PYGO1Q9Y3Y4 419 aa1.04□□□□□ -2.24
TRAV1-1-201ENST00000542354 TRAV6A0A075B6T7 132 aa1.03□□□□□ -2.24
TRAV1-1-201ENST00000542354 A0A1W2PNN7 141 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms