RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 GRNP28799 593 aaKnown RBP13.08□□□□□ -0.32
VARS2-212ENST00000542001 RPL15P61313 204 aaKnown RBP13.08□□□□□ -0.32
VARS2-212ENST00000542001 COL6A3P12111 3177 aa13.07□□□□□ -0.32
VARS2-212ENST00000542001 OR4B1Q8NGF8 309 aa13.07□□□□□ -0.32
VARS2-212ENST00000542001 WFDC12Q8WWY7 111 aa13.07□□□□□ -0.32
VARS2-212ENST00000542001 OR4C46A6NHA9 309 aa13.07□□□□□ -0.32
VARS2-212ENST00000542001 CLEC19AQ6UXS0 136 aa13.07□□□□□ -0.32
VARS2-212ENST00000542001 TMEM136Q6ZRR5 245 aa13.07□□□□□ -0.32
VARS2-212ENST00000542001 Q6ZSR3 168 aa13.07□□□□□ -0.32
VARS2-212ENST00000542001 ODF3L1Q8IXM7 274 aa13.07□□□□□ -0.32
VARS2-212ENST00000542001 C16orf92Q96LL3 132 aa13.07□□□□□ -0.32
VARS2-212ENST00000542001 SPRY4Q9C004 299 aa13.07□□□□□ -0.32
VARS2-212ENST00000542001 C21orf62Q9NYP8 219 aa13.07□□□□□ -0.32
VARS2-212ENST00000542001 A0A1W2PRE2 83 aa13.07□□□□□ -0.32
VARS2-212ENST00000542001 F2Z2F3 143 aa13.07□□□□□ -0.32
VARS2-212ENST00000542001 FAM106CPP0CH98 169 aa13.07□□□□□ -0.32
VARS2-212ENST00000542001 TMEM219Q86XT9 240 aa13.07□□□□□ -0.32
VARS2-212ENST00000542001 TMEM116Q8NCL8 245 aa13.07□□□□□ -0.32
VARS2-212ENST00000542001 CHODLQ9H9P2 273 aa13.07□□□□□ -0.32
VARS2-212ENST00000542001 EREGO14944 169 aa13.06□□□□□ -0.32
VARS2-212ENST00000542001 WT1-ASQ06250 92 aa13.06□□□□□ -0.32
VARS2-212ENST00000542001 KRTAP27-1Q3LI81 207 aa13.06□□□□□ -0.32
VARS2-212ENST00000542001 RNASEH2CQ8TDP1 164 aaKnown RBP13.06□□□□□ -0.32
VARS2-212ENST00000542001 LRRK2Q5S007 2527 aa13.06□□□□□ -0.32
VARS2-212ENST00000542001 NBEAQ8NFP9 2946 aa13.06□□□□□ -0.32
VARS2-212ENST00000542001 A1L4Q6 167 aa13.06□□□□□ -0.32
VARS2-212ENST00000542001 SMIM17P0DL12 118 aa13.06□□□□□ -0.32
VARS2-212ENST00000542001 UQCR10Q9UDW1 63 aa13.06□□□□□ -0.32
VARS2-212ENST00000542001 GGTLC3B5MD39 225 aa13.06□□□□□ -0.32
VARS2-212ENST00000542001 APOHP02749 345 aaPredicted RBP13.06□□□□□ -0.32
VARS2-212ENST00000542001 FRMD6-AS1P0C7T7 363 aa13.06□□□□□ -0.32
VARS2-212ENST00000542001 C22orf34Q6ZV56 151 aa13.06□□□□□ -0.32
VARS2-212ENST00000542001 GLMPQ8WWB7 406 aa13.06□□□□□ -0.32
VARS2-212ENST00000542001 RPP21Q9H633 154 aaKnown RBP13.06□□□□□ -0.32
VARS2-212ENST00000542001 CDC42EP3Q9UKI2 254 aa13.06□□□□□ -0.32
VARS2-212ENST00000542001 HLA-DRB1P01911 266 aa13.05□□□□□ -0.32
VARS2-212ENST00000542001 C2orf83Q53S99 150 aa13.05□□□□□ -0.32
VARS2-212ENST00000542001 Q8TAT8 98 aa13.05□□□□□ -0.32
VARS2-212ENST00000542001 KLF2Q9Y5W3 355 aaPredicted RBP13.05□□□□□ -0.32
VARS2-212ENST00000542001 AP5S1Q9NUS5 200 aa13.05□□□□□ -0.32
VARS2-212ENST00000542001 IGHV1-3A0A0C4DH29 117 aa13.05□□□□□ -0.32
VARS2-212ENST00000542001 IZUMO1RA6ND01 250 aa13.05□□□□□ -0.32
VARS2-212ENST00000542001 NPIPB5A8MRT5 1133 aa13.05□□□□□ -0.32
VARS2-212ENST00000542001 COMPP49747 757 aaPredicted RBP13.05□□□□□ -0.32
VARS2-212ENST00000542001 GRAMD2BQ96HH9 432 aa13.05□□□□□ -0.32
VARS2-212ENST00000542001 ACTL10Q5JWF8 245 aa13.04□□□□□ -0.32
VARS2-212ENST00000542001 ZNF738Q8NE65 137 aa13.04□□□□□ -0.32
VARS2-212ENST00000542001 HIVEP2P31629 2446 aa13.04□□□□□ -0.32
VARS2-212ENST00000542001 HCFC1P51610 2035 aa13.04□□□□□ -0.32
VARS2-212ENST00000542001 C10orf142B7Z368 130 aa13.04□□□□□ -0.32
VARS2-212ENST00000542001 PROP1O75360 226 aa13.04□□□□□ -0.32
VARS2-212ENST00000542001 IGLV1-44P01699 117 aa13.04□□□□□ -0.32
VARS2-212ENST00000542001 LBHQ53QV2 105 aaPredicted RBP13.04□□□□□ -0.32
VARS2-212ENST00000542001 UNQ6494/PRO21346Q6UXR6 183 aa13.04□□□□□ -0.32
VARS2-212ENST00000542001 Q8TCH9 128 aa13.04□□□□□ -0.32
VARS2-212ENST00000542001 RNF125Q96EQ8 232 aa13.04□□□□□ -0.32
VARS2-212ENST00000542001 DSPP15924 2871 aaKnown RBP13.04□□□□□ -0.32
VARS2-212ENST00000542001 KIAA1549Q9HCM3 1950 aa13.04□□□□□ -0.32
VARS2-212ENST00000542001 FOXL1Q12952 345 aa13.04□□□□□ -0.32
VARS2-212ENST00000542001 TMEM78Q5T7P6 136 aa13.04□□□□□ -0.32
VARS2-212ENST00000542001 OSTCQ9NRP0 149 aa13.04□□□□□ -0.32
VARS2-212ENST00000542001 TMEM14BQ9NUH8 114 aa13.04□□□□□ -0.32
VARS2-212ENST00000542001 NBR2O15453 112 aa13.03□□□□□ -0.32
VARS2-212ENST00000542001 ZNF324O75467 553 aaPredicted RBP13.03□□□□□ -0.32
VARS2-212ENST00000542001 SEM1Q6ZVN7 128 aa13.03□□□□□ -0.32
VARS2-212ENST00000542001 SRD5A1P18405 259 aa13.03□□□□□ -0.32
VARS2-212ENST00000542001 ARPC1AQ92747 370 aa13.03□□□□□ -0.32
VARS2-212ENST00000542001 LSM4Q9Y4Z0 139 aaKnown RBP13.03□□□□□ -0.32
VARS2-212ENST00000542001 IGKV2-40A0A087WW87 121 aaPredicted RBP13.03□□□□□ -0.32
VARS2-212ENST00000542001 A0A1B0GUT8 65 aa13.03□□□□□ -0.32
VARS2-212ENST00000542001 M0QZK8 103 aa13.03□□□□□ -0.32
VARS2-212ENST00000542001 IGKV2D-40P01614 121 aaPredicted RBP13.03□□□□□ -0.32
VARS2-212ENST00000542001 HSPB8Q9UJY1 196 aa13.03□□□□□ -0.32
VARS2-212ENST00000542001 ZNF257Q9Y2Q1 563 aa13.03□□□□□ -0.32
VARS2-212ENST00000542001 MORN5Q5VZ52 161 aa13.03□□□□□ -0.32
VARS2-212ENST00000542001 ZNF295-AS1Q8N0V1 137 aa13.03□□□□□ -0.32
VARS2-212ENST00000542001 ABCA12Q86UK0 2595 aa13.02□□□□□ -0.32
VARS2-212ENST00000542001 NUDT3O95989 172 aa13.02□□□□□ -0.32
VARS2-212ENST00000542001 RPL7P18124 248 aaKnown RBP13.02□□□□□ -0.32
VARS2-212ENST00000542001 ATP5J2P56134 94 aa13.02□□□□□ -0.32
VARS2-212ENST00000542001 NUP35Q8NFH5 326 aa13.02□□□□□ -0.32
VARS2-212ENST00000542001 TMEM70Q9BUB7 260 aa13.02□□□□□ -0.32
VARS2-212ENST00000542001 NUPR1O60356 82 aa13.02□□□□□ -0.33
VARS2-212ENST00000542001 NDUFS7O75251 213 aa13.02□□□□□ -0.33
VARS2-212ENST00000542001 TMEM167AQ8TBQ9 72 aa13.02□□□□□ -0.33
VARS2-212ENST00000542001 FAM168AQ92567 244 aa13.02□□□□□ -0.33
VARS2-212ENST00000542001 SIGLEC9Q9Y336 463 aa13.02□□□□□ -0.33
VARS2-212ENST00000542001 JMJD1CQ15652 2540 aa13.02□□□□□ -0.33
VARS2-212ENST00000542001 M0R381 172 aa13.02□□□□□ -0.33
VARS2-212ENST00000542001 FNDC4Q9H6D8 234 aaPredicted RBP13.02□□□□□ -0.33
VARS2-212ENST00000542001 TRBV20OR9-2A0A075B6H5 130 aa13.01□□□□□ -0.33
VARS2-212ENST00000542001 NCR2O95944 276 aa13.01□□□□□ -0.33
VARS2-212ENST00000542001 RPL24P83731 157 aaKnown RBP13.01□□□□□ -0.33
VARS2-212ENST00000542001 IGLV3-9A0A075B6K5 115 aa13.01□□□□□ -0.33
VARS2-212ENST00000542001 BRWD1-AS2P59051 145 aa13.01□□□□□ -0.33
VARS2-212ENST00000542001 CX3CL1P78423 397 aa13.01□□□□□ -0.33
VARS2-212ENST00000542001 BRD3OSQ6XYD6 125 aa13.01□□□□□ -0.33
VARS2-212ENST00000542001 PDLIM4P50479 330 aa13.01□□□□□ -0.33
VARS2-212ENST00000542001 NIT1Q86X76 327 aa13.01□□□□□ -0.33
VARS2-212ENST00000542001 KLRB1Q12918 225 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 572.9 ms