RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 SNRPGP15A8MWD9 76 aa14.01□□□□□ -0.17
LPCAT3-210ENST00000540090 SULT1A3P0DMM9 295 aa14.01□□□□□ -0.17
LPCAT3-210ENST00000540090 SULT1A4P0DMN0 295 aa14.01□□□□□ -0.17
LPCAT3-210ENST00000540090 GPX4P36969 197 aaPredicted RBP14.01□□□□□ -0.17
LPCAT3-210ENST00000540090 GAMTQ14353 236 aa14.01□□□□□ -0.17
LPCAT3-210ENST00000540090 SURF2Q15527 256 aaPredicted RBP14.01□□□□□ -0.17
LPCAT3-210ENST00000540090 AMTNQ6UX39 209 aa14.01□□□□□ -0.17
LPCAT3-210ENST00000540090 OR8I2Q8N0Y5 310 aa14.01□□□□□ -0.17
LPCAT3-210ENST00000540090 LGI3Q8N145 548 aa14.01□□□□□ -0.17
LPCAT3-210ENST00000540090 C20orf173Q96LM9 149 aa14.01□□□□□ -0.17
LPCAT3-210ENST00000540090 TMEM208Q9BTX3 173 aa14.01□□□□□ -0.17
LPCAT3-210ENST00000540090 FUNDC2Q9BWH2 189 aa14.01□□□□□ -0.17
LPCAT3-210ENST00000540090 RPRMQ9NS64 109 aa14.01□□□□□ -0.17
LPCAT3-210ENST00000540090 DOK5Q9P104 306 aa14.01□□□□□ -0.17
LPCAT3-210ENST00000540090 EXTL2Q9UBQ6 330 aa14.01□□□□□ -0.17
LPCAT3-210ENST00000540090 LYRM9A8MSI8 78 aa14□□□□□ -0.17
LPCAT3-210ENST00000540090 ATP5IP56385 69 aaPredicted RBP14□□□□□ -0.17
LPCAT3-210ENST00000540090 LYZP61626 148 aa14□□□□□ -0.17
LPCAT3-210ENST00000540090 GPR107Q5VW38 600 aa14□□□□□ -0.17
LPCAT3-210ENST00000540090 C15orf40Q8WUR7 153 aa14□□□□□ -0.17
LPCAT3-210ENST00000540090 HSPB7Q9UBY9 170 aa14□□□□□ -0.17
LPCAT3-210ENST00000540090 GPR132Q9UNW8 380 aa14□□□□□ -0.17
LPCAT3-210ENST00000540090 PRM2P04554 102 aa13.99□□□□□ -0.17
LPCAT3-210ENST00000540090 DTD1Q8TEA8 209 aa13.99□□□□□ -0.17
LPCAT3-210ENST00000540090 IL22RA2Q969J5 263 aa13.99□□□□□ -0.17
LPCAT3-210ENST00000540090 C16orf92Q96LL3 132 aa13.99□□□□□ -0.17
LPCAT3-210ENST00000540090 ZNF705GA8MUZ8 300 aaPredicted RBP13.98□□□□□ -0.17
LPCAT3-210ENST00000540090 FABP1P07148 127 aa13.98□□□□□ -0.17
LPCAT3-210ENST00000540090 MEOX2P50222 304 aa13.98□□□□□ -0.17
LPCAT3-210ENST00000540090 FAAP20Q6NZ36 180 aa13.98□□□□□ -0.17
LPCAT3-210ENST00000540090 PPP1R14BQ96C90 147 aa13.98□□□□□ -0.17
LPCAT3-210ENST00000540090 SLC35E1Q96K37 410 aa13.98□□□□□ -0.17
LPCAT3-210ENST00000540090 C17orf77Q96MU5 243 aa13.98□□□□□ -0.17
LPCAT3-210ENST00000540090 RBKSQ9H477 322 aa13.98□□□□□ -0.17
LPCAT3-210ENST00000540090 SCRT2Q9NQ03 307 aa13.98□□□□□ -0.17
LPCAT3-210ENST00000540090 GABARAPH6UMI1 98 aa13.97□□□□□ -0.17
LPCAT3-210ENST00000540090 CRXO43186 299 aaPredicted RBP13.97□□□□□ -0.17
LPCAT3-210ENST00000540090 GABARAPO95166 117 aa13.97□□□□□ -0.17
LPCAT3-210ENST00000540090 DEFB130BP0DP73 79 aa13.97□□□□□ -0.17
LPCAT3-210ENST00000540090 DEFB130AP0DP74 79 aa13.97□□□□□ -0.17
LPCAT3-210ENST00000540090 CCR6P51684 374 aa13.97□□□□□ -0.17
LPCAT3-210ENST00000540090 CCL18P55774 89 aa13.97□□□□□ -0.17
LPCAT3-210ENST00000540090 SSBP1Q04837 148 aaKnown RBP13.97□□□□□ -0.17
LPCAT3-210ENST00000540090 OR2F1Q13607 317 aa13.97□□□□□ -0.17
LPCAT3-210ENST00000540090 AP3S1Q92572 193 aa13.97□□□□□ -0.17
LPCAT3-210ENST00000540090 TRGV9Q99603 122 aa13.97□□□□□ -0.17
LPCAT3-210ENST00000540090 LINC00588Q9Y4M8 146 aa13.97□□□□□ -0.17
LPCAT3-210ENST00000540090 DISC1C4P0D8 188 aa13.96□□□□□ -0.17
LPCAT3-210ENST00000540090 F5H768 121 aa13.96□□□□□ -0.17
LPCAT3-210ENST00000540090 NUDT3O95989 172 aa13.96□□□□□ -0.17
LPCAT3-210ENST00000540090 TSPOP30536 169 aa13.96□□□□□ -0.17
LPCAT3-210ENST00000540090 B2MP61769 119 aa13.96□□□□□ -0.17
LPCAT3-210ENST00000540090 RSG1Q9BU20 258 aa13.96□□□□□ -0.17
LPCAT3-210ENST00000540090 KCNIP3Q9Y2W7 256 aa13.96□□□□□ -0.17
LPCAT3-210ENST00000540090 ZNF182P17025 639 aaPredicted RBP13.95□□□□□ -0.18
LPCAT3-210ENST00000540090 GALR1P47211 349 aa13.95□□□□□ -0.18
LPCAT3-210ENST00000540090 CNN1P51911 297 aaKnown RBP13.95□□□□□ -0.18
LPCAT3-210ENST00000540090 SMCO1Q147U7 214 aa13.95□□□□□ -0.18
LPCAT3-210ENST00000540090 SPATA12Q7Z6I5 190 aa13.95□□□□□ -0.18
LPCAT3-210ENST00000540090 OR11H7Q8NGC8 314 aa13.95□□□□□ -0.18
LPCAT3-210ENST00000540090 PRR13Q9NZ81 148 aa13.95□□□□□ -0.18
LPCAT3-210ENST00000540090 A0A0B4J2A0 478 aa13.94□□□□□ -0.18
LPCAT3-210ENST00000540090 PLAC8L1A1L4L8 177 aa13.94□□□□□ -0.18
LPCAT3-210ENST00000540090 DUSP14O95147 198 aaKnown RBP13.94□□□□□ -0.18
LPCAT3-210ENST00000540090 INSP01308 110 aa13.94□□□□□ -0.18
LPCAT3-210ENST00000540090 FCN2Q15485 313 aa13.94□□□□□ -0.18
LPCAT3-210ENST00000540090 SPINK13Q1W4C9 94 aa13.94□□□□□ -0.18
LPCAT3-210ENST00000540090 SLC25A32Q9H2D1 315 aa13.94□□□□□ -0.18
LPCAT3-210ENST00000540090 SHPKQ9UHJ6 478 aa13.94□□□□□ -0.18
LPCAT3-210ENST00000540090 IGKV1OR2-108A0A075B7D4 117 aa13.93□□□□□ -0.18
LPCAT3-210ENST00000540090 CBY3A6NI87 242 aa13.93□□□□□ -0.18
LPCAT3-210ENST00000540090 ZNF98A6NK75 572 aa13.93□□□□□ -0.18
LPCAT3-210ENST00000540090 M0R2Z0 102 aa13.93□□□□□ -0.18
LPCAT3-210ENST00000540090 CFDP00746 253 aaPredicted RBP13.93□□□□□ -0.18
LPCAT3-210ENST00000540090 ATP5G1P05496 136 aa13.93□□□□□ -0.18
LPCAT3-210ENST00000540090 AZU1P20160 251 aa13.93□□□□□ -0.18
LPCAT3-210ENST00000540090 ATP5G3P48201 142 aa13.93□□□□□ -0.18
LPCAT3-210ENST00000540090 LYZL2Q7Z4W2 148 aa13.93□□□□□ -0.18
LPCAT3-210ENST00000540090 GPR141Q7Z602 305 aa13.93□□□□□ -0.18
LPCAT3-210ENST00000540090 THAP8Q8NA92 274 aa13.93□□□□□ -0.18
LPCAT3-210ENST00000540090 SLC45A2Q9UMX9 530 aa13.93□□□□□ -0.18
LPCAT3-210ENST00000540090 MRPS10P82664 201 aaKnown RBP13.92□□□□□ -0.18
LPCAT3-210ENST00000540090 GGNBP1Q5YKI7 109 aa13.92□□□□□ -0.18
LPCAT3-210ENST00000540090 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.92□□□□□ -0.18
LPCAT3-210ENST00000540090 OR4C16Q8NGL9 310 aa13.92□□□□□ -0.18
LPCAT3-210ENST00000540090 OR4D5Q8NGN0 318 aa13.92□□□□□ -0.18
LPCAT3-210ENST00000540090 RNF141Q8WVD5 230 aa13.92□□□□□ -0.18
LPCAT3-210ENST00000540090 PRRT1Q99946 306 aa13.92□□□□□ -0.18
LPCAT3-210ENST00000540090 Q9H8V8 135 aa13.92□□□□□ -0.18
LPCAT3-210ENST00000540090 SLC25A22Q9H936 323 aa13.92□□□□□ -0.18
LPCAT3-210ENST00000540090 AKAIN1P0CW23 69 aa13.91□□□□□ -0.18
LPCAT3-210ENST00000540090 SSX7Q7RTT5 188 aa13.91□□□□□ -0.18
LPCAT3-210ENST00000540090 MIXL1Q9H2W2 232 aa13.91□□□□□ -0.18
LPCAT3-210ENST00000540090 TRAV8-2A0A0B4J237 113 aa13.9□□□□□ -0.18
LPCAT3-210ENST00000540090 RAB11AP62491 216 aa13.9□□□□□ -0.18
LPCAT3-210ENST00000540090 CTF1Q16619 201 aa13.9□□□□□ -0.18
LPCAT3-210ENST00000540090 IGFL4Q6B9Z1 124 aa13.9□□□□□ -0.18
LPCAT3-210ENST00000540090 BAP18Q8IXM2 172 aa13.9□□□□□ -0.18
LPCAT3-210ENST00000540090 OR51S1Q8NGJ8 323 aa13.9□□□□□ -0.18
LPCAT3-210ENST00000540090 OR1B1Q8NGR6 318 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms