RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 C1orf122Q6ZSJ8 110 aa7.33□□□□□ -1.24
DDB1-211ENST00000538280 OR8I2Q8N0Y5 310 aa7.33□□□□□ -1.24
DDB1-211ENST00000538280 FOXC2Q99958 501 aa7.33□□□□□ -1.24
DDB1-211ENST00000538280 RNASE7Q9H1E1 156 aaKnown RBP7.33□□□□□ -1.24
DDB1-211ENST00000538280 TMEM14CQ9P0S9 112 aa7.33□□□□□ -1.24
DDB1-211ENST00000538280 ONECUT1Q9UBC0 465 aa7.33□□□□□ -1.24
DDB1-211ENST00000538280 TNCP24821 2201 aa7.33□□□□□ -1.24
DDB1-211ENST00000538280 ABCA4P78363 2273 aa7.32□□□□□ -1.24
DDB1-211ENST00000538280 LOC105371242A0A075B767 164 aa7.32□□□□□ -1.24
DDB1-211ENST00000538280 IZUMO1RA6ND01 250 aa7.32□□□□□ -1.24
DDB1-211ENST00000538280 OOSP1A8MZH6 123 aa7.32□□□□□ -1.24
DDB1-211ENST00000538280 K7EIM0 57 aa7.32□□□□□ -1.24
DDB1-211ENST00000538280 FCN1O00602 326 aa7.32□□□□□ -1.24
DDB1-211ENST00000538280 NBR2O15453 112 aa7.32□□□□□ -1.24
DDB1-211ENST00000538280 CEACAM3P40198 252 aa7.32□□□□□ -1.24
DDB1-211ENST00000538280 RPL19P84098 196 aaKnown RBP7.32□□□□□ -1.24
DDB1-211ENST00000538280 RASL11AQ6T310 242 aa7.32□□□□□ -1.24
DDB1-211ENST00000538280 TMEM256Q8N2U0 113 aa7.32□□□□□ -1.24
DDB1-211ENST00000538280 Q8N6K4 173 aa7.32□□□□□ -1.24
DDB1-211ENST00000538280 WIPF2Q8TF74 440 aaPredicted RBP7.32□□□□□ -1.24
DDB1-211ENST00000538280 ZNF48Q96MX3 618 aaPredicted RBP7.32□□□□□ -1.24
DDB1-211ENST00000538280 SSBP3Q9BWW4 388 aaPredicted RBP7.32□□□□□ -1.24
DDB1-211ENST00000538280 MRPL27Q9P0M9 148 aaKnown RBP7.32□□□□□ -1.24
DDB1-211ENST00000538280 EPDR1Q9UM22 224 aa7.32□□□□□ -1.24
DDB1-211ENST00000538280 TRBV6-1A0A0K0K1D8 114 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 A6NNC1 897 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 SNURFLB1AK76 121 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 NUPR1O60356 82 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 LY6HO94772 140 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 AMY1AP04745 511 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 NBEAP1P0C6P0 100 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 FRMD6-AS1P0C7T7 363 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 IER3P46695 156 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 RAB4BP61018 213 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 EBI3Q14213 229 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 PRIMA1Q86XR5 153 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 KRTAP1-3Q8IUG1 177 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 C5orf17Q8NAS9 161 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 WFDC11Q8NEX6 87 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 OR1B1Q8NGR6 318 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 GRAMD2BQ96HH9 432 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 LINC00479Q96M42 142 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 MDFIQ99750 246 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 CHRDL1Q9BU40 450 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 MLST8Q9BVC4 326 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 WNT10AQ9GZT5 417 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 ZNF492Q9P255 531 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 HIGD1AQ9Y241 93 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 CUBNO60494 3623 aa7.31□□□□□ -1.24
DDB1-211ENST00000538280 A0A1B0GUS0 222 aa7.3□□□□□ -1.24
DDB1-211ENST00000538280 PGPA6NDG6 321 aa7.3□□□□□ -1.24
DDB1-211ENST00000538280 NPIPB5A8MRT5 1133 aa7.3□□□□□ -1.24
DDB1-211ENST00000538280 H3BRN7 92 aa7.3□□□□□ -1.24
DDB1-211ENST00000538280 GATCO43716 136 aaKnown RBP7.3□□□□□ -1.24
DDB1-211ENST00000538280 TOMM40O96008 361 aa7.3□□□□□ -1.24
DDB1-211ENST00000538280 IGKV1-17P01599 117 aa7.3□□□□□ -1.24
DDB1-211ENST00000538280 HLA-DQA1P01909 254 aa7.3□□□□□ -1.24
DDB1-211ENST00000538280 MGST1P10620 155 aaKnown RBP7.3□□□□□ -1.24
DDB1-211ENST00000538280 PSG1P11464 419 aa7.3□□□□□ -1.24
DDB1-211ENST00000538280 CRISP2P16562 243 aa7.3□□□□□ -1.24
DDB1-211ENST00000538280 ORM2P19652 201 aa7.3□□□□□ -1.24
DDB1-211ENST00000538280 GPR6P46095 362 aaPredicted RBP7.3□□□□□ -1.24
DDB1-211ENST00000538280 ARF6P62330 175 aa7.3□□□□□ -1.24
DDB1-211ENST00000538280 GNG5P63218 68 aa7.3□□□□□ -1.24
DDB1-211ENST00000538280 PAFAH1B2P68402 229 aa7.3□□□□□ -1.24
DDB1-211ENST00000538280 KLRD1Q13241 179 aa7.3□□□□□ -1.24
DDB1-211ENST00000538280 FXYD3Q14802 87 aa7.3□□□□□ -1.24
DDB1-211ENST00000538280 C9orf152Q5JTZ5 239 aa7.3□□□□□ -1.24
DDB1-211ENST00000538280 MINOS1Q5TGZ0 78 aa7.3□□□□□ -1.24
DDB1-211ENST00000538280 LHFPL4Q7Z7J7 247 aa7.3□□□□□ -1.24
DDB1-211ENST00000538280 BAGE2Q86Y30 109 aa7.3□□□□□ -1.24
DDB1-211ENST00000538280 CMTM2Q8TAZ6 248 aa7.3□□□□□ -1.24
DDB1-211ENST00000538280 ATG101Q9BSB4 218 aa7.3□□□□□ -1.24
DDB1-211ENST00000538280 SIRPDQ9H106 197 aa7.3□□□□□ -1.24
DDB1-211ENST00000538280 MINOS1-NBL1R4GNA1 71 aa7.3□□□□□ -1.24
DDB1-211ENST00000538280 IGLV11-55A0A075B6I3 123 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 IGHV3-21A0A0B4J1V1 117 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 TRAV20A0A0B4J274 112 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 A0A1W2PPR1 153 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 WI2-2373I1.2A0A1W2PRP0 233 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 GRIFINA4D1Z8 144 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 C19orf71A6NCJ1 209 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 ZNF705GA8MUZ8 300 aaPredicted RBP7.29□□□□□ -1.24
DDB1-211ENST00000538280 MRPS12O15235 138 aaKnown RBP7.29□□□□□ -1.24
DDB1-211ENST00000538280 LTAP01374 205 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 TCRAP04437 139 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 SLC25A5P05141 298 aaKnown RBP7.29□□□□□ -1.24
DDB1-211ENST00000538280 APELAP0DMC3 54 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 HIST1H1EP10412 219 aaKnown RBP7.29□□□□□ -1.24
DDB1-211ENST00000538280 MMDQ15546 238 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 C5orf64Q2M2E5 130 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 KLK9Q2XQG4 91 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 FBLN7Q53RD9 439 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 CT83Q5H943 113 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 OR10J3Q5JRS4 329 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 FAM209BQ5JX69 171 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 ASPHD1Q5U4P2 390 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 CCDC144NLQ6NUI1 221 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 ZNF600Q6ZNG1 722 aa7.29□□□□□ -1.24
DDB1-211ENST00000538280 REC114Q7Z4M0 266 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms