RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 FAM24BQ8N5W8 94 aa16.87■□□□□ 0.29
SFSWAP-204ENST00000535399 STXBP6Q8NFX7 210 aa16.87■□□□□ 0.29
SFSWAP-204ENST00000535399 RNF126Q9BV68 326 aa16.87■□□□□ 0.29
SFSWAP-204ENST00000535399 MAP6D1Q9H9H5 199 aa16.87■□□□□ 0.29
SFSWAP-204ENST00000535399 SLC45A2Q9UMX9 530 aa16.87■□□□□ 0.29
SFSWAP-204ENST00000535399 ORM2P19652 201 aa16.86■□□□□ 0.29
SFSWAP-204ENST00000535399 CXCL3P19876 107 aa16.86■□□□□ 0.29
SFSWAP-204ENST00000535399 S100A11P31949 105 aa16.86■□□□□ 0.29
SFSWAP-204ENST00000535399 OXA1LQ15070 435 aa16.86■□□□□ 0.29
SFSWAP-204ENST00000535399 VWC2Q2TAL6 325 aa16.86■□□□□ 0.29
SFSWAP-204ENST00000535399 C1orf194Q5T5A4 169 aa16.86■□□□□ 0.29
SFSWAP-204ENST00000535399 DCANP1Q8TF63 244 aa16.86■□□□□ 0.29
SFSWAP-204ENST00000535399 AP2S1P53680 142 aaPredicted RBP16.85■□□□□ 0.29
SFSWAP-204ENST00000535399 PLP1P60201 277 aa16.85■□□□□ 0.29
SFSWAP-204ENST00000535399 SIGLEC15Q6ZMC9 328 aa16.85■□□□□ 0.29
SFSWAP-204ENST00000535399 APRG1Q8IVJ8 170 aa16.85■□□□□ 0.29
SFSWAP-204ENST00000535399 MGST2Q99735 147 aa16.85■□□□□ 0.29
SFSWAP-204ENST00000535399 TMEM147Q9BVK8 224 aa16.85■□□□□ 0.29
SFSWAP-204ENST00000535399 UQCC1Q9NVA1 299 aa16.85■□□□□ 0.29
SFSWAP-204ENST00000535399 U3KQK5 164 aa16.85■□□□□ 0.29
SFSWAP-204ENST00000535399 AGPAT2O15120 278 aa16.84■□□□□ 0.29
SFSWAP-204ENST00000535399 MPC2O95563 127 aa16.84■□□□□ 0.29
SFSWAP-204ENST00000535399 LINC00869P0C866 280 aa16.84■□□□□ 0.29
SFSWAP-204ENST00000535399 HBG1P69891 147 aa16.84■□□□□ 0.29
SFSWAP-204ENST00000535399 HBG2P69892 147 aa16.84■□□□□ 0.29
SFSWAP-204ENST00000535399 EWSR1Q01844 656 aaKnown RBP eCLIP16.84■□□□□ 0.29
SFSWAP-204ENST00000535399 FCN2Q15485 313 aa16.84■□□□□ 0.29
SFSWAP-204ENST00000535399 ZNF124Q15973 351 aa16.84■□□□□ 0.29
SFSWAP-204ENST00000535399 OR11H7Q8NGC8 314 aa16.84■□□□□ 0.29
SFSWAP-204ENST00000535399 OR1B1Q8NGR6 318 aa16.84■□□□□ 0.29
SFSWAP-204ENST00000535399 PPP1R14BQ96C90 147 aa16.84■□□□□ 0.29
SFSWAP-204ENST00000535399 SLC25A31Q9H0C2 315 aa16.84■□□□□ 0.29
SFSWAP-204ENST00000535399 WDR83OSQ9Y284 106 aa16.84■□□□□ 0.29
SFSWAP-204ENST00000535399 LOC102724200A0A096LPH7 203 aaPredicted RBP16.83■□□□□ 0.28
SFSWAP-204ENST00000535399 NHLH2Q02577 135 aa16.83■□□□□ 0.28
SFSWAP-204ENST00000535399 ZNF546Q86UE3 836 aa16.83■□□□□ 0.28
SFSWAP-204ENST00000535399 GGTLC1Q9BX51 225 aa16.83■□□□□ 0.28
SFSWAP-204ENST00000535399 MED28Q9H204 178 aa16.83■□□□□ 0.28
SFSWAP-204ENST00000535399 DOK5Q9P104 306 aa16.83■□□□□ 0.28
SFSWAP-204ENST00000535399 ZNF98A6NK75 572 aa16.82■□□□□ 0.28
SFSWAP-204ENST00000535399 HYPMO75409 117 aa16.82■□□□□ 0.28
SFSWAP-204ENST00000535399 DEFB131AP59861 70 aa16.82■□□□□ 0.28
SFSWAP-204ENST00000535399 ATP6V1FQ16864 119 aa16.82■□□□□ 0.28
SFSWAP-204ENST00000535399 ZMAT4Q9H898 229 aa16.82■□□□□ 0.28
SFSWAP-204ENST00000535399 NRN1Q9NPD7 142 aa16.82■□□□□ 0.28
SFSWAP-204ENST00000535399 FBXL17Q9UF56 701 aa16.82■□□□□ 0.28
SFSWAP-204ENST00000535399 STAB2Q8WWQ8 2551 aa16.81■□□□□ 0.28
SFSWAP-204ENST00000535399 PET100P0DJ07 73 aa16.81■□□□□ 0.28
SFSWAP-204ENST00000535399 OR8I2Q8N0Y5 310 aa16.81■□□□□ 0.28
SFSWAP-204ENST00000535399 RCHY1Q96PM5 261 aa16.81■□□□□ 0.28
SFSWAP-204ENST00000535399 UBE2L5PA0A1B0GUS4 154 aa16.8■□□□□ 0.28
SFSWAP-204ENST00000535399 H3BRN7 92 aa16.8■□□□□ 0.28
SFSWAP-204ENST00000535399 ZNF688P0C7X2 276 aa16.8■□□□□ 0.28
SFSWAP-204ENST00000535399 BAXQ07812 192 aa16.8■□□□□ 0.28
SFSWAP-204ENST00000535399 PATE2Q6UY27 113 aa16.8■□□□□ 0.28
SFSWAP-204ENST00000535399 SPATA25Q9BR10 227 aa16.8■□□□□ 0.28
SFSWAP-204ENST00000535399 SHANK2-AS3Q9BTD1 123 aa16.8■□□□□ 0.28
SFSWAP-204ENST00000535399 SLC25A39Q9BZJ4 359 aaPredicted RBP16.8■□□□□ 0.28
SFSWAP-204ENST00000535399 SLC25A32Q9H2D1 315 aa16.8■□□□□ 0.28
SFSWAP-204ENST00000535399 MBD2Q9UBB5 411 aa16.8■□□□□ 0.28
SFSWAP-204ENST00000535399 HIGD1AQ9Y241 93 aa16.8■□□□□ 0.28
SFSWAP-204ENST00000535399 TENM3Q9P273 2699 aa16.8■□□□□ 0.28
SFSWAP-204ENST00000535399 S100A7P31151 101 aa16.79■□□□□ 0.28
SFSWAP-204ENST00000535399 CAMLGP49069 296 aa16.79■□□□□ 0.28
SFSWAP-204ENST00000535399 RAP2BP61225 183 aa16.79■□□□□ 0.28
SFSWAP-204ENST00000535399 RAB31Q13636 194 aa16.79■□□□□ 0.28
SFSWAP-204ENST00000535399 LEMD1Q68G75 181 aa16.79■□□□□ 0.28
SFSWAP-204ENST00000535399 OR5C1Q8NGR4 320 aa16.79■□□□□ 0.28
SFSWAP-204ENST00000535399 SCRT1Q9BWW7 348 aa16.79■□□□□ 0.28
SFSWAP-204ENST00000535399 ARL6Q9H0F7 186 aa16.79■□□□□ 0.28
SFSWAP-204ENST00000535399 SLC25A22Q9H936 323 aa16.79■□□□□ 0.28
SFSWAP-204ENST00000535399 OR5G3P0C626 314 aa16.78■□□□□ 0.28
SFSWAP-204ENST00000535399 LYL1P12980 280 aa16.78■□□□□ 0.28
SFSWAP-204ENST00000535399 RPL35AP18077 110 aaKnown RBP16.78■□□□□ 0.28
SFSWAP-204ENST00000535399 PRR20EP86478 221 aa16.78■□□□□ 0.28
SFSWAP-204ENST00000535399 PRR20CP86479 221 aa16.78■□□□□ 0.28
SFSWAP-204ENST00000535399 PRR20DP86480 221 aa16.78■□□□□ 0.28
SFSWAP-204ENST00000535399 PRR20BP86481 221 aa16.78■□□□□ 0.28
SFSWAP-204ENST00000535399 PRR20AP86496 221 aa16.78■□□□□ 0.28
SFSWAP-204ENST00000535399 PXDC1Q5TGL8 231 aa16.78■□□□□ 0.28
SFSWAP-204ENST00000535399 CHAC2Q8WUX2 184 aa16.78■□□□□ 0.28
SFSWAP-204ENST00000535399 SEPSECSQ9HD40 501 aaKnown RBP16.78■□□□□ 0.28
SFSWAP-204ENST00000535399 RETNQ9HD89 108 aa16.78■□□□□ 0.28
SFSWAP-204ENST00000535399 NBEAL2Q6ZNJ1 2754 aa16.77■□□□□ 0.28
SFSWAP-204ENST00000535399 OPCMLQ14982 345 aa16.77■□□□□ 0.28
SFSWAP-204ENST00000535399 MIC13Q5XKP0 118 aa16.77■□□□□ 0.28
SFSWAP-204ENST00000535399 C17orf77Q96MU5 243 aa16.77■□□□□ 0.28
SFSWAP-204ENST00000535399 UHRF2Q96PU4 802 aa16.77■□□□□ 0.28
SFSWAP-204ENST00000535399 ARV1Q9H2C2 271 aa16.77■□□□□ 0.28
SFSWAP-204ENST00000535399 SOCS3O14543 225 aa16.76■□□□□ 0.27
SFSWAP-204ENST00000535399 FGF7P21781 194 aa16.76■□□□□ 0.27
SFSWAP-204ENST00000535399 GALR1P47211 349 aa16.76■□□□□ 0.27
SFSWAP-204ENST00000535399 CLINT1Q14677 625 aa16.76■□□□□ 0.27
SFSWAP-204ENST00000535399 HSPB11Q9Y547 144 aa16.76■□□□□ 0.27
SFSWAP-204ENST00000535399 KIR2DL5BA0A0G2JN68 375 aa16.75■□□□□ 0.27
SFSWAP-204ENST00000535399 KIR2DL5BA0A0G2JPC4 375 aa16.75■□□□□ 0.27
SFSWAP-204ENST00000535399 MPDU1O75352 247 aa16.75■□□□□ 0.27
SFSWAP-204ENST00000535399 RPL12P30050 165 aaKnown RBP16.75■□□□□ 0.27
SFSWAP-204ENST00000535399 RPL29P47914 159 aaKnown RBP16.75■□□□□ 0.27
SFSWAP-204ENST00000535399 APOC4P55056 127 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms