RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	C5orf63	A6NC05	138 aa		12.83	□□□□□ -0.36
NCAPD3-213	ENST00000534532	ZNF98	A6NK75	572 aa		12.83	□□□□□ -0.36
NCAPD3-213	ENST00000534532	LCN12	Q6JVE5	192 aa		12.83	□□□□□ -0.36
NCAPD3-213	ENST00000534532	OVOL3	O00110	214 aa		12.83	□□□□□ -0.36
NCAPD3-213	ENST00000534532	KIR3DL3	Q8N743	410 aa		12.83	□□□□□ -0.36
NCAPD3-213	ENST00000534532	GFI1	Q99684	422 aa		12.83	□□□□□ -0.36
NCAPD3-213	ENST00000534532	TRBV7-9	A0A0J9YWB2	115 aa		12.83	□□□□□ -0.36
NCAPD3-213	ENST00000534532	ZNF138	P52744	262 aa		12.83	□□□□□ -0.36
NCAPD3-213	ENST00000534532	ZNF562	Q6V9R5	426 aa		12.83	□□□□□ -0.36
NCAPD3-213	ENST00000534532	NPIPB5	A8MRT5	1133 aa		12.82	□□□□□ -0.36
NCAPD3-213	ENST00000534532	ORMDL2	Q53FV1	153 aa		12.82	□□□□□ -0.36
NCAPD3-213	ENST00000534532	SCRT1	Q9BWW7	348 aa		12.82	□□□□□ -0.36
NCAPD3-213	ENST00000534532	OSTC	Q9NRP0	149 aa		12.82	□□□□□ -0.36
NCAPD3-213	ENST00000534532	LINC01619	G3V211	115 aa		12.82	□□□□□ -0.36
NCAPD3-213	ENST00000534532	CFHR2	P36980	270 aa		12.82	□□□□□ -0.36
NCAPD3-213	ENST00000534532	RNF126	Q9BV68	326 aa		12.82	□□□□□ -0.36
NCAPD3-213	ENST00000534532	VWA8	A3KMH1	1905 aa		12.82	□□□□□ -0.36
NCAPD3-213	ENST00000534532	ETV2	O00321	342 aa	Predicted RBP	12.82	□□□□□ -0.36
NCAPD3-213	ENST00000534532	TTC9C	Q8N5M4	171 aa		12.82	□□□□□ -0.36
NCAPD3-213	ENST00000534532	TRAV5	A0A0B4J249	113 aa		12.82	□□□□□ -0.36
NCAPD3-213	ENST00000534532	GAGE10	A6NGK3	116 aa		12.82	□□□□□ -0.36
NCAPD3-213	ENST00000534532	ITGB1BP1	O14713	200 aa		12.82	□□□□□ -0.36
NCAPD3-213	ENST00000534532	CD28	P10747	220 aa		12.82	□□□□□ -0.36
NCAPD3-213	ENST00000534532	UBE2E2	Q96LR5	201 aa		12.82	□□□□□ -0.36
NCAPD3-213	ENST00000534532	GGTLC1	Q9BX51	225 aa		12.82	□□□□□ -0.36
NCAPD3-213	ENST00000534532	RNASE7	Q9H1E1	156 aa	Known RBP	12.82	□□□□□ -0.36
NCAPD3-213	ENST00000534532	NXT2	Q9NPJ8	142 aa	Known RBP	12.82	□□□□□ -0.36
NCAPD3-213	ENST00000534532	IGKV3D-20	A0A0C4DH25	116 aa		12.81	□□□□□ -0.36
NCAPD3-213	ENST00000534532	LINC01549	A6NIU2	74 aa		12.81	□□□□□ -0.36
NCAPD3-213	ENST00000534532	LHFPL1	Q86WI0	220 aa		12.81	□□□□□ -0.36
NCAPD3-213	ENST00000534532	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	12.81	□□□□□ -0.36
NCAPD3-213	ENST00000534532	SLC25A20	O43772	301 aa		12.81	□□□□□ -0.36
NCAPD3-213	ENST00000534532	IGKV2D-40	P01614	121 aa	Predicted RBP	12.81	□□□□□ -0.36
NCAPD3-213	ENST00000534532	FAM215A	Q9Y5M1	114 aa		12.81	□□□□□ -0.36
NCAPD3-213	ENST00000534532	TRAV3	A0A0B4J244	114 aa		12.81	□□□□□ -0.36
NCAPD3-213	ENST00000534532	LDLRAD4	O15165	306 aa		12.8	□□□□□ -0.36
NCAPD3-213	ENST00000534532	JKAMP	Q9P055	326 aa		12.8	□□□□□ -0.36
NCAPD3-213	ENST00000534532	DOCK7	Q96N67	2140 aa		12.8	□□□□□ -0.36
NCAPD3-213	ENST00000534532	TRAV12-3	A0A0B4J271	114 aa		12.8	□□□□□ -0.36
NCAPD3-213	ENST00000534532	SCN8A	Q9UQD0	1980 aa		12.8	□□□□□ -0.36
NCAPD3-213	ENST00000534532	WISP1	O95388	367 aa		12.8	□□□□□ -0.36
NCAPD3-213	ENST00000534532	FAM110D	Q8TAY7	271 aa	Predicted RBP	12.8	□□□□□ -0.36
NCAPD3-213	ENST00000534532	LINC00473	A8K010	186 aa		12.8	□□□□□ -0.36
NCAPD3-213	ENST00000534532	NUDT11	Q96G61	164 aa		12.8	□□□□□ -0.36
NCAPD3-213	ENST00000534532	RFNG	Q9Y644	331 aa		12.8	□□□□□ -0.36
NCAPD3-213	ENST00000534532	MGAM	O43451	1857 aa		12.8	□□□□□ -0.36
NCAPD3-213	ENST00000534532	TOMM40	O96008	361 aa		12.79	□□□□□ -0.36
NCAPD3-213	ENST00000534532	IGF2-AS	Q6U949	168 aa		12.79	□□□□□ -0.36
NCAPD3-213	ENST00000534532	PROK2	Q9HC23	129 aa		12.79	□□□□□ -0.36
NCAPD3-213	ENST00000534532	RPL23	P62829	140 aa	Known RBP	12.79	□□□□□ -0.36
NCAPD3-213	ENST00000534532	IMMP2L	Q96T52	175 aa		12.79	□□□□□ -0.36
NCAPD3-213	ENST00000534532	CLDN16	Q9Y5I7	305 aa		12.79	□□□□□ -0.36
NCAPD3-213	ENST00000534532	ATOH7	Q8N100	152 aa		12.79	□□□□□ -0.36
NCAPD3-213	ENST00000534532	TTC28	Q96AY4	2481 aa		12.79	□□□□□ -0.36
NCAPD3-213	ENST00000534532	IGKV1-5	P01602	117 aa		12.78	□□□□□ -0.36
NCAPD3-213	ENST00000534532	AMBP	P02760	352 aa		12.78	□□□□□ -0.36
NCAPD3-213	ENST00000534532	SOD3	P08294	240 aa		12.78	□□□□□ -0.36
NCAPD3-213	ENST00000534532	FXYD7	P58549	80 aa		12.78	□□□□□ -0.36
NCAPD3-213	ENST00000534532		Q6ZS49	121 aa		12.78	□□□□□ -0.36
NCAPD3-213	ENST00000534532	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	12.78	□□□□□ -0.36
NCAPD3-213	ENST00000534532	ATP6V0E1	O15342	81 aa		12.78	□□□□□ -0.36
NCAPD3-213	ENST00000534532	RIPPLY3	P57055	190 aa		12.78	□□□□□ -0.36
NCAPD3-213	ENST00000534532	DEFB131A	P59861	70 aa		12.78	□□□□□ -0.36
NCAPD3-213	ENST00000534532	SLX1A	Q9BQ83	275 aa		12.78	□□□□□ -0.36
NCAPD3-213	ENST00000534532	NDUFA3	O95167	84 aa		12.78	□□□□□ -0.36
NCAPD3-213	ENST00000534532	LHFPL4	Q7Z7J7	247 aa		12.78	□□□□□ -0.36
NCAPD3-213	ENST00000534532	STAG3L3	P0CL85	134 aa		12.78	□□□□□ -0.36
NCAPD3-213	ENST00000534532	EXOC3-AS1	Q8N2X6	119 aa		12.78	□□□□□ -0.36
NCAPD3-213	ENST00000534532	SUPT4H1	P63272	117 aa	Known RBP	12.78	□□□□□ -0.36
NCAPD3-213	ENST00000534532	IGHV3-53	P01767	116 aa		12.77	□□□□□ -0.36
NCAPD3-213	ENST00000534532	WNK2	Q9Y3S1	2297 aa		12.77	□□□□□ -0.37
NCAPD3-213	ENST00000534532	TMEM86B	Q8N661	226 aa		12.77	□□□□□ -0.37
NCAPD3-213	ENST00000534532	TICRR	Q7Z2Z1	1910 aa		12.77	□□□□□ -0.37
NCAPD3-213	ENST00000534532	NMS	Q5H8A3	153 aa		12.77	□□□□□ -0.37
NCAPD3-213	ENST00000534532	LYPD1	Q8N2G4	141 aa		12.77	□□□□□ -0.37
NCAPD3-213	ENST00000534532	NCOR1P1	Q9H4R4	102 aa		12.77	□□□□□ -0.37
NCAPD3-213	ENST00000534532	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	12.76	□□□□□ -0.37	2e-6	■■■■■ 30.5
NCAPD3-213	ENST00000534532		A0A087WWC5	75 aa		12.76	□□□□□ -0.37
NCAPD3-213	ENST00000534532	LY6G6F	Q5SQ64	297 aa		12.76	□□□□□ -0.37
NCAPD3-213	ENST00000534532	MBD3L1	Q8WWY6	194 aa		12.76	□□□□□ -0.37
NCAPD3-213	ENST00000534532	DEFB130B	P0DP73	79 aa		12.76	□□□□□ -0.37
NCAPD3-213	ENST00000534532	DEFB130A	P0DP74	79 aa		12.76	□□□□□ -0.37
NCAPD3-213	ENST00000534532	TSKU	Q8WUA8	353 aa		12.76	□□□□□ -0.37
NCAPD3-213	ENST00000534532	RLF	Q13129	1914 aa		12.76	□□□□□ -0.37
NCAPD3-213	ENST00000534532		H0YIZ8	118 aa		12.76	□□□□□ -0.37
NCAPD3-213	ENST00000534532	CKS1B	P61024	79 aa		12.76	□□□□□ -0.37
NCAPD3-213	ENST00000534532	RNF182	Q8N6D2	247 aa		12.76	□□□□□ -0.37
NCAPD3-213	ENST00000534532	BTC	P35070	178 aa		12.76	□□□□□ -0.37
NCAPD3-213	ENST00000534532	ZNF876P	Q49A33	203 aa		12.76	□□□□□ -0.37
NCAPD3-213	ENST00000534532	GFI1B	Q5VTD9	330 aa		12.76	□□□□□ -0.37
NCAPD3-213	ENST00000534532	NRN1	Q9NPD7	142 aa		12.76	□□□□□ -0.37
NCAPD3-213	ENST00000534532	CARHSP1	Q9Y2V2	147 aa	Known RBP	12.75	□□□□□ -0.37
NCAPD3-213	ENST00000534532	IGLV1-44	P01699	117 aa		12.75	□□□□□ -0.37
NCAPD3-213	ENST00000534532	HBD	P02042	147 aa		12.75	□□□□□ -0.37
NCAPD3-213	ENST00000534532	TCRA	P04437	139 aa		12.75	□□□□□ -0.37
NCAPD3-213	ENST00000534532	BDP1	A6H8Y1	2624 aa		12.75	□□□□□ -0.37
NCAPD3-213	ENST00000534532	CREBBP	Q92793	2442 aa		12.75	□□□□□ -0.37
NCAPD3-213	ENST00000534532	SMIM13	P0DJ93	91 aa		12.75	□□□□□ -0.37
NCAPD3-213	ENST00000534532	TMEM14EP	Q6UXP3	125 aa		12.75	□□□□□ -0.37
NCAPD3-213	ENST00000534532	PRDM13	Q9H4Q3	707 aa		12.75	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms