RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 UBAC2Q8NBM4 344 aa9.06□□□□□ -0.96
CAPN1-223ENST00000533079 RPS10-NUDT3A0A1W2PQS6 291 aa9.05□□□□□ -0.96
CAPN1-223ENST00000533079 IGLC7A0M8Q6 106 aa9.05□□□□□ -0.96
CAPN1-223ENST00000533079 OR2T8A6NH00 312 aa9.05□□□□□ -0.96
CAPN1-223ENST00000533079 CGB1A6NKQ9 187 aa9.05□□□□□ -0.96
CAPN1-223ENST00000533079 MARCH11A6NNE9 402 aa9.05□□□□□ -0.96
CAPN1-223ENST00000533079 CD5P06127 495 aa9.05□□□□□ -0.96
CAPN1-223ENST00000533079 MIFP14174 115 aa9.05□□□□□ -0.96
CAPN1-223ENST00000533079 G6PCP35575 357 aa9.05□□□□□ -0.96
CAPN1-223ENST00000533079 LGALS9BQ3B8N2 356 aa9.05□□□□□ -0.96
CAPN1-223ENST00000533079 SSX9Q7RTT3 188 aa9.05□□□□□ -0.96
CAPN1-223ENST00000533079 HSD17B13Q7Z5P4 300 aaPredicted RBP9.05□□□□□ -0.96
CAPN1-223ENST00000533079 TMEM252Q8N6L7 170 aa9.05□□□□□ -0.96
CAPN1-223ENST00000533079 POM121L12Q8N7R1 296 aa9.05□□□□□ -0.96
CAPN1-223ENST00000533079 CIB3Q96Q77 187 aaPredicted RBP9.05□□□□□ -0.96
CAPN1-223ENST00000533079 KRTAP4-5Q9BYR2 181 aa9.05□□□□□ -0.96
CAPN1-223ENST00000533079 DEFB4AO15263 64 aa9.04□□□□□ -0.96
CAPN1-223ENST00000533079 ATP6V1G1O75348 118 aa9.04□□□□□ -0.96
CAPN1-223ENST00000533079 TMEM50AO95807 157 aa9.04□□□□□ -0.96
CAPN1-223ENST00000533079 S100A1P23297 94 aa9.04□□□□□ -0.96
CAPN1-223ENST00000533079 OR2B8PP59922 312 aa9.04□□□□□ -0.96
CAPN1-223ENST00000533079 ERVK-16P61578 105 aa9.04□□□□□ -0.96
CAPN1-223ENST00000533079 C20orf24Q9BUV8 137 aa9.04□□□□□ -0.96
CAPN1-223ENST00000533079 BORCS7-ASMTA0A0B4J1R7 106 aa9.03□□□□□ -0.96
CAPN1-223ENST00000533079 SSSCA1O60232 199 aa9.03□□□□□ -0.96
CAPN1-223ENST00000533079 DFFBO76075 338 aa9.03□□□□□ -0.96
CAPN1-223ENST00000533079 NMBP08949 121 aa9.03□□□□□ -0.96
CAPN1-223ENST00000533079 HLA-DMBP28068 263 aa9.03□□□□□ -0.96
CAPN1-223ENST00000533079 SULT1A1P50225 295 aa9.03□□□□□ -0.96
CAPN1-223ENST00000533079 SPCS3P61009 180 aa9.03□□□□□ -0.96
CAPN1-223ENST00000533079 PAFAH1B2P68402 229 aa9.03□□□□□ -0.96
CAPN1-223ENST00000533079 RELQ04864 619 aaPredicted RBP9.03□□□□□ -0.96
CAPN1-223ENST00000533079 ZNF124Q15973 351 aa9.03□□□□□ -0.96
CAPN1-223ENST00000533079 SOHLH1Q5JUK2 328 aa9.03□□□□□ -0.96
CAPN1-223ENST00000533079 Q6ZTC4 211 aa9.03□□□□□ -0.96
CAPN1-223ENST00000533079 SLC7A5P1Q8MH63 180 aa9.03□□□□□ -0.96
CAPN1-223ENST00000533079 RNF2Q99496 336 aa9.03□□□□□ -0.96
CAPN1-223ENST00000533079 COMMD5Q9GZQ3 224 aa9.03□□□□□ -0.96
CAPN1-223ENST00000533079 MAGT1Q9H0U3 335 aa9.03□□□□□ -0.96
CAPN1-223ENST00000533079 SMPXQ9UHP9 88 aa9.03□□□□□ -0.96
CAPN1-223ENST00000533079 HSPG2P98160 4391 aa9.03□□□□□ -0.96
CAPN1-223ENST00000533079 IGHV4-28A0A0C4DH34 117 aa9.02□□□□□ -0.97
CAPN1-223ENST00000533079 IGHV7-4-1A0A0J9YVY3 117 aa9.02□□□□□ -0.97
CAPN1-223ENST00000533079 IGSF23A1L1A6 192 aa9.02□□□□□ -0.97
CAPN1-223ENST00000533079 FAM24AA6NFZ4 105 aa9.02□□□□□ -0.97
CAPN1-223ENST00000533079 CDK2AP2O75956 126 aa9.02□□□□□ -0.97
CAPN1-223ENST00000533079 SEC11BP0C7V7 166 aa9.02□□□□□ -0.97
CAPN1-223ENST00000533079 CAV2P51636 162 aa9.02□□□□□ -0.97
CAPN1-223ENST00000533079 ATP5IP56385 69 aaPredicted RBP9.02□□□□□ -0.97
CAPN1-223ENST00000533079 NHLH2Q02577 135 aa9.02□□□□□ -0.97
CAPN1-223ENST00000533079 ZNF266Q14584 549 aa9.02□□□□□ -0.97
CAPN1-223ENST00000533079 IZUMO4Q1ZYL8 232 aa9.02□□□□□ -0.97
CAPN1-223ENST00000533079 RPL7L1Q6DKI1 246 aaKnown RBP9.02□□□□□ -0.97
CAPN1-223ENST00000533079 ALKAL2Q6UX46 152 aa9.02□□□□□ -0.97
CAPN1-223ENST00000533079 STX12Q86Y82 276 aa9.02□□□□□ -0.97
CAPN1-223ENST00000533079 OR4A16Q8NH70 328 aa9.02□□□□□ -0.97
CAPN1-223ENST00000533079 GINS3Q9BRX5 216 aa9.02□□□□□ -0.97
CAPN1-223ENST00000533079 RHPN1-AS1Q9BWJ2 59 aa9.02□□□□□ -0.97
CAPN1-223ENST00000533079 QTRT1Q9BXR0 403 aaKnown RBP9.02□□□□□ -0.97
CAPN1-223ENST00000533079 FKBP11Q9NYL4 201 aa9.02□□□□□ -0.97
CAPN1-223ENST00000533079 C21orf62Q9NYP8 219 aa9.02□□□□□ -0.97
CAPN1-223ENST00000533079 TRAV2A0A0B4J234 112 aa9.01□□□□□ -0.97
CAPN1-223ENST00000533079 ZNF705EA8MWA4 302 aaPredicted RBP9.01□□□□□ -0.97
CAPN1-223ENST00000533079 CHEK1O14757 476 aa9.01□□□□□ -0.97
CAPN1-223ENST00000533079 ATP6V1FQ16864 119 aa9.01□□□□□ -0.97
CAPN1-223ENST00000533079 TMEM14EPQ6UXP3 125 aa9.01□□□□□ -0.97
CAPN1-223ENST00000533079 TMEM116Q8NCL8 245 aa9.01□□□□□ -0.97
CAPN1-223ENST00000533079 RNF141Q8WVD5 230 aa9.01□□□□□ -0.97
CAPN1-223ENST00000533079 SAT2Q96F10 170 aaPredicted RBP9.01□□□□□ -0.97
CAPN1-223ENST00000533079 MUC4Q99102 2169 aa9.01□□□□□ -0.97
CAPN1-223ENST00000533079 CHRDL1Q9BU40 450 aa9.01□□□□□ -0.97
CAPN1-223ENST00000533079 NDUFAF3Q9BU61 184 aa9.01□□□□□ -0.97
CAPN1-223ENST00000533079 PARD6GQ9BYG4 376 aaPredicted RBP9.01□□□□□ -0.97
CAPN1-223ENST00000533079 RBKSQ9H477 322 aa9.01□□□□□ -0.97
CAPN1-223ENST00000533079 WFDC1Q9HC57 220 aa9.01□□□□□ -0.97
CAPN1-223ENST00000533079 TMEM14BQ9NUH8 114 aa9.01□□□□□ -0.97
CAPN1-223ENST00000533079 TMEM140Q9NV12 185 aa9.01□□□□□ -0.97
CAPN1-223ENST00000533079 PSENENQ9NZ42 101 aa9.01□□□□□ -0.97
CAPN1-223ENST00000533079 PRNDQ9UKY0 176 aa9.01□□□□□ -0.97
CAPN1-223ENST00000533079 F8W735 103 aaPredicted RBP9□□□□□ -0.97
CAPN1-223ENST00000533079 UPK2O00526 184 aa9□□□□□ -0.97
CAPN1-223ENST00000533079 RBMY1A1P0DJD3 496 aaKnown RBP9□□□□□ -0.97
CAPN1-223ENST00000533079 RBMY1CP0DJD4 496 aa9□□□□□ -0.97
CAPN1-223ENST00000533079 SPP1P10451 314 aa9□□□□□ -0.97
CAPN1-223ENST00000533079 TFPI2P48307 235 aa9□□□□□ -0.97
CAPN1-223ENST00000533079 RAB5CP51148 216 aa9□□□□□ -0.97
CAPN1-223ENST00000533079 HSPE1P61604 102 aaKnown RBP9□□□□□ -0.97
CAPN1-223ENST00000533079 RPP30P78346 268 aaKnown RBP9□□□□□ -0.97
CAPN1-223ENST00000533079 RBMY1FQ15415 496 aaKnown RBP9□□□□□ -0.97
CAPN1-223ENST00000533079 FAM90A2PQ658T7 463 aa9□□□□□ -0.97
CAPN1-223ENST00000533079 MORN3Q6PF18 240 aaPredicted RBP9□□□□□ -0.97
CAPN1-223ENST00000533079 ZNF575Q86XF7 245 aa9□□□□□ -0.97
CAPN1-223ENST00000533079 STHQ8IWL8 128 aa9□□□□□ -0.97
CAPN1-223ENST00000533079 OR1S2Q8NGQ3 325 aa9□□□□□ -0.97
CAPN1-223ENST00000533079 DTD1Q8TEA8 209 aa9□□□□□ -0.97
CAPN1-223ENST00000533079 F11RQ9Y624 299 aaKnown RBP9□□□□□ -0.97
CAPN1-223ENST00000533079 DEFB131BA0A096LNP1 70 aa8.99□□□□□ -0.97
CAPN1-223ENST00000533079 INS-IGF2F8WCM5 200 aa8.99□□□□□ -0.97
CAPN1-223ENST00000533079 NUPL2O15504 423 aaKnown RBP8.99□□□□□ -0.97
CAPN1-223ENST00000533079 ZNF207O43670 478 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms