RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 IGKV1D-8A0A087WSZ0 117 aa6.25□□□□□ -1.41
CTNND1-233ENST00000532787 SNRNP200O75643 2136 aaKnown RBP6.25□□□□□ -1.41
CTNND1-233ENST00000532787 CDK2AP2O75956 126 aa6.25□□□□□ -1.41
CTNND1-233ENST00000532787 IGHV1-8P0DP01 117 aa6.25□□□□□ -1.41
CTNND1-233ENST00000532787 FOXF2Q12947 444 aa6.25□□□□□ -1.41
CTNND1-233ENST00000532787 C1QTNF4Q9BXJ3 329 aa6.25□□□□□ -1.41
CTNND1-233ENST00000532787 COL11A2P13942 1736 aaPredicted RBP6.25□□□□□ -1.41
CTNND1-233ENST00000532787 IGKV1-12A0A0C4DH73 117 aa6.24□□□□□ -1.41
CTNND1-233ENST00000532787 SMAD7O15105 426 aaKnown RBP6.24□□□□□ -1.41
CTNND1-233ENST00000532787 IGKV1D-12P01611 117 aa6.24□□□□□ -1.41
CTNND1-233ENST00000532787 ZFP36L1Q07352 338 aaKnown RBP6.24□□□□□ -1.41
CTNND1-233ENST00000532787 PMVKQ15126 192 aa6.24□□□□□ -1.41
CTNND1-233ENST00000532787 GLRX5Q86SX6 157 aa6.24□□□□□ -1.41
CTNND1-233ENST00000532787 RPP25LQ8N5L8 163 aaKnown RBP6.24□□□□□ -1.41
CTNND1-233ENST00000532787 C20orf144Q9BQM9 153 aa6.24□□□□□ -1.41
CTNND1-233ENST00000532787 TRBV20-1A0A075B6N2 111 aa6.24□□□□□ -1.41
CTNND1-233ENST00000532787 NPIPB5A8MRT5 1133 aa6.24□□□□□ -1.41
CTNND1-233ENST00000532787 TRACP01848 142 aa6.24□□□□□ -1.41
CTNND1-233ENST00000532787 TMEM141Q96I45 108 aa6.24□□□□□ -1.41
CTNND1-233ENST00000532787 CHAC1Q9BUX1 264 aa6.24□□□□□ -1.41
CTNND1-233ENST00000532787 IGHV1-3A0A0C4DH29 117 aa6.24□□□□□ -1.41
CTNND1-233ENST00000532787 F8WEM9 126 aa6.24□□□□□ -1.41
CTNND1-233ENST00000532787 INAFM2P0DMQ5 153 aa6.24□□□□□ -1.41
CTNND1-233ENST00000532787 KIR3DS1Q14943 382 aa6.24□□□□□ -1.41
CTNND1-233ENST00000532787 ZNF319Q9P2F9 582 aa6.24□□□□□ -1.41
CTNND1-233ENST00000532787 COLQQ9Y215 455 aaPredicted RBP6.24□□□□□ -1.41
CTNND1-233ENST00000532787 TAF1LQ8IZX4 1826 aa6.24□□□□□ -1.41
CTNND1-233ENST00000532787 EPOPA6NHQ4 379 aa6.24□□□□□ -1.41
CTNND1-233ENST00000532787 PMS2P5A8MQ11 134 aa6.24□□□□□ -1.41
CTNND1-233ENST00000532787 MPV17L2Q567V2 206 aa6.24□□□□□ -1.41
CTNND1-233ENST00000532787 GFI1BQ5VTD9 330 aa6.24□□□□□ -1.41
CTNND1-233ENST00000532787 H0YJW9 148 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 IGKV1-5P01602 117 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 ERCC8Q13216 396 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 FOXL2NBQ6ZUU3 175 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 TMEM75Q8N9X5 138 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 SSC4DQ8WTU2 575 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 GLMPQ8WWB7 406 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 IGKV2-40A0A087WW87 121 aaPredicted RBP6.23□□□□□ -1.41
CTNND1-233ENST00000532787 IGKV3D-20A0A0C4DH25 116 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 IGKV2D-40P01614 121 aaPredicted RBP6.23□□□□□ -1.41
CTNND1-233ENST00000532787 TMEM258P61165 79 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 C20orf204Q6ZNR8 217 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 GATD1Q8NB37 220 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 LY6G5BQ8NDX9 201 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 QRFPP83859 136 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 RSPO4Q2I0M5 234 aaPredicted RBP6.23□□□□□ -1.41
CTNND1-233ENST00000532787 ZNF876PQ49A33 203 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 MLNRO43193 412 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 PYY3Q5JQD4 70 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 ZNF329Q86UD4 541 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 TSSC4Q9Y5U2 329 aaPredicted RBP6.23□□□□□ -1.41
CTNND1-233ENST00000532787 TMEM178BH3BS89 294 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 PAX4O43316 350 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 C15orf32Q32M92 178 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 TMEM200BQ69YZ2 307 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 GGNQ86UU5 652 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 SCRT1Q9BWW7 348 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 SPRR3Q9UBC9 169 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 METRNQ9UJH8 293 aa6.23□□□□□ -1.41
CTNND1-233ENST00000532787 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.22□□□□□ -1.41
CTNND1-233ENST00000532787 NTN3O00634 580 aaPredicted RBP6.22□□□□□ -1.41
CTNND1-233ENST00000532787 NDUFC2O95298 119 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 NCR2O95944 276 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 IFITM1P13164 125 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 EFNA4P52798 201 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 Q86TA4 180 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 TRPT1Q86TN4 253 aaKnown RBP6.22□□□□□ -1.41
CTNND1-233ENST00000532787 SMIM20Q8N5G0 67 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 TIMM21Q9BVV7 248 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 CRIM1Q9NZV1 1036 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 LAMTOR3Q9UHA4 124 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 GAGE12JA6NER3 117 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 MMP23AO75900 390 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 GAGE7O76087 117 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 INSP01308 110 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 GAGE12FP0CL80 117 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 GAGE12GP0CL81 117 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 GAGE12IP0CL82 117 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 HTN3P15516 51 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 GAGE4Q13068 117 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 C5orf64Q2M2E5 130 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 PNRC2Q9NPJ4 139 aaKnown RBP6.22□□□□□ -1.41
CTNND1-233ENST00000532787 MTCL1Q9Y4B5 1905 aaKnown RBP6.22□□□□□ -1.41
CTNND1-233ENST00000532787 A0A087WX48 190 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 NDUFB8O95169 186 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 PPIFP30405 207 aaKnown RBP6.22□□□□□ -1.41
CTNND1-233ENST00000532787 LCN12Q6JVE5 192 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 CSTL1Q9H114 145 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 GREB1LQ9C091 1923 aaPredicted RBP6.22□□□□□ -1.41
CTNND1-233ENST00000532787 PSME4Q14997 1843 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 NRXN2Q9P2S2 1712 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 LILRA1O75019 489 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 Q6P435 159 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 ZNF114Q8NC26 417 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 TMEM158Q8WZ71 300 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 SS18L2Q9UHA2 77 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 SCN8AQ9UQD0 1980 aa6.22□□□□□ -1.41
CTNND1-233ENST00000532787 IGHV3OR16-8A0A075B7F1 116 aa6.21□□□□□ -1.41
CTNND1-233ENST00000532787 H3BMM0 161 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms