RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 ZNF705BP0CI00 300 aaPredicted RBP12.08□□□□□ -0.48
CPSF1-207ENST00000531727 COQ8AQ8NI60 647 aa12.08□□□□□ -0.48
CPSF1-207ENST00000531727 DEDD2Q8WXF8 326 aa12.08□□□□□ -0.48
CPSF1-207ENST00000531727 PPP1R14BQ96C90 147 aa12.08□□□□□ -0.48
CPSF1-207ENST00000531727 CIB3Q96Q77 187 aaPredicted RBP12.08□□□□□ -0.48
CPSF1-207ENST00000531727 PAIP2BQ9ULR5 123 aaKnown RBP12.08□□□□□ -0.48
CPSF1-207ENST00000531727 TMED3Q9Y3Q3 217 aa12.08□□□□□ -0.48
CPSF1-207ENST00000531727 SMIM9A6NGZ8 99 aa12.07□□□□□ -0.48
CPSF1-207ENST00000531727 ISLRO14498 428 aa12.07□□□□□ -0.48
CPSF1-207ENST00000531727 SFT2D2O95562 160 aa12.07□□□□□ -0.48
CPSF1-207ENST00000531727 CFDP00746 253 aaPredicted RBP12.07□□□□□ -0.48
CPSF1-207ENST00000531727 FXYD7P58549 80 aa12.07□□□□□ -0.48
CPSF1-207ENST00000531727 RPP30P78346 268 aaKnown RBP12.07□□□□□ -0.48
CPSF1-207ENST00000531727 PPP1R1AQ13522 171 aa12.07□□□□□ -0.48
CPSF1-207ENST00000531727 ZNF79Q15937 498 aa12.07□□□□□ -0.48
CPSF1-207ENST00000531727 SPATA31B1PQ5VZV4 182 aa12.07□□□□□ -0.48
CPSF1-207ENST00000531727 OR8I2Q8N0Y5 310 aa12.07□□□□□ -0.48
CPSF1-207ENST00000531727 ZNF709Q8N972 641 aa12.07□□□□□ -0.48
CPSF1-207ENST00000531727 TMEM189A5PLL7 270 aa12.06□□□□□ -0.48
CPSF1-207ENST00000531727 PRSS46E5RG02 174 aa12.06□□□□□ -0.48
CPSF1-207ENST00000531727 SYNGR2O43760 224 aa12.06□□□□□ -0.48
CPSF1-207ENST00000531727 PAX9P55771 341 aa12.06□□□□□ -0.48
CPSF1-207ENST00000531727 SAMD13Q5VXD3 122 aa12.06□□□□□ -0.48
CPSF1-207ENST00000531727 GGNBP1Q5YKI7 109 aa12.06□□□□□ -0.48
CPSF1-207ENST00000531727 MAGT1Q9H0U3 335 aa12.06□□□□□ -0.48
CPSF1-207ENST00000531727 IGHV3OR16-12A0A075B7B8 117 aa12.05□□□□□ -0.48
CPSF1-207ENST00000531727 WRBO00258 174 aa12.05□□□□□ -0.48
CPSF1-207ENST00000531727 HOXB5P09067 269 aa12.05□□□□□ -0.48
CPSF1-207ENST00000531727 SPART-AS1P0CW21 52 aa12.05□□□□□ -0.48
CPSF1-207ENST00000531727 S100A5P33763 92 aa12.05□□□□□ -0.48
CPSF1-207ENST00000531727 MEOX2P50222 304 aa12.05□□□□□ -0.48
CPSF1-207ENST00000531727 EBLN2Q6P2I7 272 aa12.05□□□□□ -0.48
CPSF1-207ENST00000531727 GSG1LQ6UXU4 331 aa12.05□□□□□ -0.48
CPSF1-207ENST00000531727 CCDC190Q86UF4 302 aa12.05□□□□□ -0.48
CPSF1-207ENST00000531727 OR4B1Q8NGF8 309 aa12.05□□□□□ -0.48
CPSF1-207ENST00000531727 SLC45A2Q9UMX9 530 aa12.05□□□□□ -0.48
CPSF1-207ENST00000531727 GALR1P47211 349 aa12.04□□□□□ -0.48
CPSF1-207ENST00000531727 PSG9Q00887 426 aa12.04□□□□□ -0.48
CPSF1-207ENST00000531727 FAM78BQ5VT40 261 aa12.04□□□□□ -0.48
CPSF1-207ENST00000531727 NDUFAF3Q9BU61 184 aa12.04□□□□□ -0.48
CPSF1-207ENST00000531727 SCRT1Q9BWW7 348 aa12.04□□□□□ -0.48
CPSF1-207ENST00000531727 SLC35B3Q9H1N7 401 aa12.04□□□□□ -0.48
CPSF1-207ENST00000531727 SLC25A32Q9H2D1 315 aa12.04□□□□□ -0.48
CPSF1-207ENST00000531727 RPRMQ9NS64 109 aa12.04□□□□□ -0.48
CPSF1-207ENST00000531727 RFNGQ9Y644 331 aa12.04□□□□□ -0.48
CPSF1-207ENST00000531727 A0A0J9YX75 114 aa12.03□□□□□ -0.48
CPSF1-207ENST00000531727 ZNF98A6NK75 572 aa12.03□□□□□ -0.48
CPSF1-207ENST00000531727 F6UB75 175 aa12.03□□□□□ -0.48
CPSF1-207ENST00000531727 P0DMU3 169 aa12.03□□□□□ -0.48
CPSF1-207ENST00000531727 FAM231AP0DMU4 169 aa12.03□□□□□ -0.48
CPSF1-207ENST00000531727 FAM231CP0DMU5 169 aa12.03□□□□□ -0.48
CPSF1-207ENST00000531727 EMP1P54849 157 aa12.03□□□□□ -0.48
CPSF1-207ENST00000531727 UBE2MP61081 183 aaKnown RBP12.03□□□□□ -0.48
CPSF1-207ENST00000531727 SPANXN5Q5MJ07 72 aa12.03□□□□□ -0.48
CPSF1-207ENST00000531727 BPIFCQ8NFQ6 507 aa12.03□□□□□ -0.48
CPSF1-207ENST00000531727 C16orf92Q96LL3 132 aa12.03□□□□□ -0.48
CPSF1-207ENST00000531727 C20orf173Q96LM9 149 aa12.03□□□□□ -0.48
CPSF1-207ENST00000531727 GOLT1BQ9Y3E0 138 aa12.03□□□□□ -0.48
CPSF1-207ENST00000531727 TEX48A0A1B0GUV7 120 aa12.02□□□□□ -0.49
CPSF1-207ENST00000531727 CCDC160A6NGH7 325 aa12.02□□□□□ -0.49
CPSF1-207ENST00000531727 H3BP45 60 aa12.02□□□□□ -0.49
CPSF1-207ENST00000531727 AKR1C1Q04828 323 aa12.02□□□□□ -0.49
CPSF1-207ENST00000531727 POM121L12Q8N7R1 296 aa12.02□□□□□ -0.49
CPSF1-207ENST00000531727 OR4D5Q8NGN0 318 aa12.02□□□□□ -0.49
CPSF1-207ENST00000531727 RSG1Q9BU20 258 aa12.02□□□□□ -0.49
CPSF1-207ENST00000531727 SLC25A22Q9H936 323 aa12.02□□□□□ -0.49
CPSF1-207ENST00000531727 DKK2Q9UBU2 259 aa12.02□□□□□ -0.49
CPSF1-207ENST00000531727 STRAPQ9Y3F4 350 aaKnown RBP12.02□□□□□ -0.49
CPSF1-207ENST00000531727 A8MTW9 85 aa12.01□□□□□ -0.49
CPSF1-207ENST00000531727 ORM2P19652 201 aa12.01□□□□□ -0.49
CPSF1-207ENST00000531727 GATA2P23769 480 aaPredicted RBP12.01□□□□□ -0.49
CPSF1-207ENST00000531727 TMEM182Q6ZP80 229 aaPredicted RBP12.01□□□□□ -0.49
CPSF1-207ENST00000531727 ACOT7LQ6ZUV0 252 aa12.01□□□□□ -0.49
CPSF1-207ENST00000531727 C1orf158Q8N1D5 194 aa12.01□□□□□ -0.49
CPSF1-207ENST00000531727 OR1B1Q8NGR6 318 aa12.01□□□□□ -0.49
CPSF1-207ENST00000531727 C17orf77Q96MU5 243 aa12.01□□□□□ -0.49
CPSF1-207ENST00000531727 GPR82Q96P67 336 aa12.01□□□□□ -0.49
CPSF1-207ENST00000531727 TMEM147Q9BVK8 224 aa12.01□□□□□ -0.49
CPSF1-207ENST00000531727 DOK5Q9P104 306 aa12.01□□□□□ -0.49
CPSF1-207ENST00000531727 C9orf170A2RU37 121 aa12□□□□□ -0.49
CPSF1-207ENST00000531727 ADAP1O75689 374 aa12□□□□□ -0.49
CPSF1-207ENST00000531727 S100A7P31151 101 aa12□□□□□ -0.49
CPSF1-207ENST00000531727 FAM222AQ5U5X8 452 aa12□□□□□ -0.49
CPSF1-207ENST00000531727 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12□□□□□ -0.49
CPSF1-207ENST00000531727 LINC00336Q6ZUF6 198 aa12□□□□□ -0.49
CPSF1-207ENST00000531727 TMEM144Q7Z5S9 345 aa12□□□□□ -0.49
CPSF1-207ENST00000531727 C7orf50Q9BRJ6 194 aaKnown RBP12□□□□□ -0.49
CPSF1-207ENST00000531727 NIPSNAP3BQ9BS92 247 aa12□□□□□ -0.49
CPSF1-207ENST00000531727 HBE1P02100 147 aa11.99□□□□□ -0.49
CPSF1-207ENST00000531727 POLR2GP62487 172 aaKnown RBP eCLIP11.99□□□□□ -0.49
CPSF1-207ENST00000531727 ID3Q02535 119 aa11.99□□□□□ -0.49
CPSF1-207ENST00000531727 SPANXN2Q5MJ10 180 aa11.99□□□□□ -0.49
CPSF1-207ENST00000531727 AMTNQ6UX39 209 aa11.99□□□□□ -0.49
CPSF1-207ENST00000531727 FAM210BQ96KR6 192 aa11.99□□□□□ -0.49
CPSF1-207ENST00000531727 SRRQ9GZT4 340 aa11.99□□□□□ -0.49
CPSF1-207ENST00000531727 HERC2O95714 4834 aa11.99□□□□□ -0.49
CPSF1-207ENST00000531727 LOC102723971A0A1B0GUV8 181 aa11.98□□□□□ -0.49
CPSF1-207ENST00000531727 NDUFB6O95139 128 aa11.98□□□□□ -0.49
CPSF1-207ENST00000531727 RRN3P1Q2M238 152 aa11.98□□□□□ -0.49
CPSF1-207ENST00000531727 CYP2G1PQ6ZSU1 146 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms