RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 RASL11BQ9BPW5 248 aa13.9□□□□□ -0.18
USH1C-205ENST00000527020 FAM103A1Q9BTL3 118 aaKnown RBP13.9□□□□□ -0.18
USH1C-205ENST00000527020 ZNF586Q9NXT0 402 aa13.9□□□□□ -0.18
USH1C-205ENST00000527020 ASH1LQ9NR48 2969 aaKnown RBP13.9□□□□□ -0.18
USH1C-205ENST00000527020 A0A1W2PPR1 153 aa13.9□□□□□ -0.18
USH1C-205ENST00000527020 A0A1W2PRD5 423 aa13.9□□□□□ -0.18
USH1C-205ENST00000527020 A0A1W2PRF3 423 aa13.9□□□□□ -0.18
USH1C-205ENST00000527020 A0A1W2PRM7 423 aa13.9□□□□□ -0.18
USH1C-205ENST00000527020 VWC2LB2RUY7 222 aa13.9□□□□□ -0.18
USH1C-205ENST00000527020 TOMM40O96008 361 aa13.9□□□□□ -0.18
USH1C-205ENST00000527020 TCRAP04437 139 aa13.9□□□□□ -0.18
USH1C-205ENST00000527020 SLAQ13239 276 aa13.9□□□□□ -0.18
USH1C-205ENST00000527020 OR10J3Q5JRS4 329 aa13.9□□□□□ -0.18
USH1C-205ENST00000527020 SMIM12Q96EX1 92 aa13.9□□□□□ -0.18
USH1C-205ENST00000527020 RCHY1Q96PM5 261 aa13.9□□□□□ -0.18
USH1C-205ENST00000527020 HSPB9Q9BQS6 159 aa13.9□□□□□ -0.18
USH1C-205ENST00000527020 TMEM14CQ9P0S9 112 aa13.9□□□□□ -0.18
USH1C-205ENST00000527020 LTAP01374 205 aa13.89□□□□□ -0.19
USH1C-205ENST00000527020 SRIP30626 198 aa13.89□□□□□ -0.19
USH1C-205ENST00000527020 USF2Q15853 346 aaPredicted RBP13.89□□□□□ -0.19
USH1C-205ENST00000527020 TSKUQ8WUA8 353 aa13.89□□□□□ -0.19
USH1C-205ENST00000527020 RNF114Q9Y508 228 aa13.89□□□□□ -0.19
USH1C-205ENST00000527020 RASL11AQ6T310 242 aa13.89□□□□□ -0.19
USH1C-205ENST00000527020 DYNAPQ8N1N2 210 aa13.89□□□□□ -0.19
USH1C-205ENST00000527020 FMC1Q96HJ9 113 aa13.89□□□□□ -0.19
USH1C-205ENST00000527020 NEU1Q99519 415 aa13.89□□□□□ -0.19
USH1C-205ENST00000527020 NDUFAF3Q9BU61 184 aa13.89□□□□□ -0.19
USH1C-205ENST00000527020 APCSP02743 223 aa13.88□□□□□ -0.19
USH1C-205ENST00000527020 HIST1H1EP10412 219 aaKnown RBP13.88□□□□□ -0.19
USH1C-205ENST00000527020 CDKN1AP38936 164 aa13.88□□□□□ -0.19
USH1C-205ENST00000527020 CEACAM3P40198 252 aa13.88□□□□□ -0.19
USH1C-205ENST00000527020 DTX2Q86UW9 622 aa13.88□□□□□ -0.19
USH1C-205ENST00000527020 ZNF331Q9NQX6 463 aaPredicted RBP13.88□□□□□ -0.19
USH1C-205ENST00000527020 HIVEP3Q5T1R4 2406 aa13.88□□□□□ -0.19
USH1C-205ENST00000527020 A6NNC1 897 aa13.88□□□□□ -0.19
USH1C-205ENST00000527020 GPX1P07203 203 aa13.88□□□□□ -0.19
USH1C-205ENST00000527020 BRS3P32247 399 aa13.88□□□□□ -0.19
USH1C-205ENST00000527020 C5orf64Q2M2E5 130 aa13.88□□□□□ -0.19
USH1C-205ENST00000527020 KLF17Q5JT82 389 aaPredicted RBP13.88□□□□□ -0.19
USH1C-205ENST00000527020 C1orf194Q5T5A4 169 aa13.88□□□□□ -0.19
USH1C-205ENST00000527020 TBX15Q96SF7 602 aa13.88□□□□□ -0.19
USH1C-205ENST00000527020 CHRDL1Q9BU40 450 aa13.88□□□□□ -0.19
USH1C-205ENST00000527020 PRSS22Q9GZN4 317 aa13.88□□□□□ -0.19
USH1C-205ENST00000527020 OTORQ9NRC9 128 aa13.88□□□□□ -0.19
USH1C-205ENST00000527020 KIR2DL5BA0A0G2JN68 375 aa13.87□□□□□ -0.19
USH1C-205ENST00000527020 KIR2DL5BA0A0G2JPC4 375 aa13.87□□□□□ -0.19
USH1C-205ENST00000527020 C19orf71A6NCJ1 209 aa13.87□□□□□ -0.19
USH1C-205ENST00000527020 HIGD1CA8MV81 97 aa13.87□□□□□ -0.19
USH1C-205ENST00000527020 KIR2DL5AQ8N109 375 aa13.87□□□□□ -0.19
USH1C-205ENST00000527020 SPTBN1Q01082 2364 aaKnown RBP13.87□□□□□ -0.19
USH1C-205ENST00000527020 ZNF253O75346 499 aa13.86□□□□□ -0.19
USH1C-205ENST00000527020 EXOC3-AS1Q8N2X6 119 aa13.86□□□□□ -0.19
USH1C-205ENST00000527020 RBM14Q96PK6 669 aaKnown RBP13.86□□□□□ -0.19
USH1C-205ENST00000527020 SAMD10Q9BYL1 202 aa13.86□□□□□ -0.19
USH1C-205ENST00000527020 A0A1W2PS18 150 aa13.86□□□□□ -0.19
USH1C-205ENST00000527020 IGLV2-11P01706 119 aa13.86□□□□□ -0.19
USH1C-205ENST00000527020 ZFP36P26651 326 aaKnown RBP13.86□□□□□ -0.19
USH1C-205ENST00000527020 HES1Q14469 280 aa13.86□□□□□ -0.19
USH1C-205ENST00000527020 Q71RC1 249 aaPredicted RBP13.86□□□□□ -0.19
USH1C-205ENST00000527020 VMO1Q7Z5L0 202 aa13.86□□□□□ -0.19
USH1C-205ENST00000527020 ZNF491Q8N8L2 437 aa13.86□□□□□ -0.19
USH1C-205ENST00000527020 KCNS1Q96KK3 526 aa13.86□□□□□ -0.19
USH1C-205ENST00000527020 TMEM68Q96MH6 324 aa13.86□□□□□ -0.19
USH1C-205ENST00000527020 SHANK2-AS3Q9BTD1 123 aa13.86□□□□□ -0.19
USH1C-205ENST00000527020 ZNF492Q9P255 531 aa13.86□□□□□ -0.19
USH1C-205ENST00000527020 FBXL7Q9UJT9 491 aa13.86□□□□□ -0.19
USH1C-205ENST00000527020 TRAV8-1A0A0A6YYK1 113 aa13.85□□□□□ -0.19
USH1C-205ENST00000527020 A0A1B0GXF2 115 aa13.85□□□□□ -0.19
USH1C-205ENST00000527020 ZNF705FA8MVS1 300 aaPredicted RBP13.85□□□□□ -0.19
USH1C-205ENST00000527020 H3BRN7 92 aa13.85□□□□□ -0.19
USH1C-205ENST00000527020 ZNF705DP0CH99 300 aaPredicted RBP13.85□□□□□ -0.19
USH1C-205ENST00000527020 ZNF705BP0CI00 300 aaPredicted RBP13.85□□□□□ -0.19
USH1C-205ENST00000527020 HOXB4P17483 251 aaPredicted RBP13.85□□□□□ -0.19
USH1C-205ENST00000527020 NDPQ00604 133 aa13.85□□□□□ -0.19
USH1C-205ENST00000527020 TEX43Q6ZNM6 134 aa13.85□□□□□ -0.19
USH1C-205ENST00000527020 FANCD2OSQ96PS1 177 aa13.85□□□□□ -0.19
USH1C-205ENST00000527020 RPP21Q9H633 154 aaKnown RBP13.85□□□□□ -0.19
USH1C-205ENST00000527020 S4R3C0 116 aa13.85□□□□□ -0.19
USH1C-205ENST00000527020 WNK2Q9Y3S1 2297 aa13.85□□□□□ -0.19
USH1C-205ENST00000527020 NDUFS7O75251 213 aa13.85□□□□□ -0.19
USH1C-205ENST00000527020 GPR6P46095 362 aaPredicted RBP13.85□□□□□ -0.19
USH1C-205ENST00000527020 TDRG1Q3Y452 100 aa13.85□□□□□ -0.19
USH1C-205ENST00000527020 C1orf122Q6ZSJ8 110 aa13.85□□□□□ -0.19
USH1C-205ENST00000527020 TCF24Q7RTU0 167 aa13.85□□□□□ -0.19
USH1C-205ENST00000527020 Q86TA4 180 aa13.85□□□□□ -0.19
USH1C-205ENST00000527020 Q8N6K4 173 aa13.85□□□□□ -0.19
USH1C-205ENST00000527020 C18orf32Q8TCD1 76 aa13.85□□□□□ -0.19
USH1C-205ENST00000527020 C17orf77Q96MU5 243 aa13.85□□□□□ -0.19
USH1C-205ENST00000527020 TOMM20LQ6UXN7 152 aa13.84□□□□□ -0.19
USH1C-205ENST00000527020 GTSF1Q8WW33 167 aa13.84□□□□□ -0.19
USH1C-205ENST00000527020 TBL2Q9Y4P3 447 aaKnown RBP13.84□□□□□ -0.19
USH1C-205ENST00000527020 ITPR1Q14643 2758 aa13.84□□□□□ -0.19
USH1C-205ENST00000527020 IGLV11-55A0A075B6I3 123 aa13.83□□□□□ -0.19
USH1C-205ENST00000527020 IGLC2P0DOY2 106 aa13.83□□□□□ -0.19
USH1C-205ENST00000527020 BCL6BQ8N143 479 aaPredicted RBP13.83□□□□□ -0.19
USH1C-205ENST00000527020 SIGLECL1Q8N7X8 197 aa13.83□□□□□ -0.19
USH1C-205ENST00000527020 Q8N976 141 aa13.83□□□□□ -0.19
USH1C-205ENST00000527020 ZMAT5Q9UDW3 170 aaKnown RBP13.83□□□□□ -0.19
USH1C-205ENST00000527020 TRBV19A0A075B6N1 114 aa13.83□□□□□ -0.2
USH1C-205ENST00000527020 WI2-2373I1.2A0A1W2PRP0 233 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms