RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 PHB2Q99623 299 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 THTPAQ9BU02 230 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 CHRDL1Q9BU40 450 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 HINT2Q9BX68 163 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 MED28Q9H204 178 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 OR51E2Q9H255 320 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 DCSTAMPQ9H295 470 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 MIXL1Q9H2W2 232 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 SAV1Q9H4B6 383 aaPredicted RBP0.91□□□□□ -2.26
CD44-212ENST00000524922 C12orf4Q9NQ89 552 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 C8orf4Q9NR00 106 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 COMMD9Q9P000 198 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 RAB26Q9ULW5 256 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 PRELID3BQ9Y3B1 194 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 YTHDF2Q9Y5A9 579 aaKnown RBP0.91□□□□□ -2.26
CD44-212ENST00000524922 TIMM8BQ9Y5J9 83 aaPredicted RBP0.91□□□□□ -2.26
CD44-212ENST00000524922 F11RQ9Y624 299 aaKnown RBP0.91□□□□□ -2.26
CD44-212ENST00000524922 V9GYY5 206 aaPredicted RBP0.91□□□□□ -2.26
CD44-212ENST00000524922 MDN1Q9NU22 5596 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 SYNE2Q8WXH0 6885 aaKnown RBP0.91□□□□□ -2.26
CD44-212ENST00000524922 FLGP20930 4061 aaPredicted RBP0.9□□□□□ -2.27
CD44-212ENST00000524922 IGLV1-50A0A075B6I6 118 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 IGHV1OR15-1A0A075B7D0 117 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 A0A096LPF7 62 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 TRAV8-1A0A0A6YYK1 113 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 RNF222A6NCQ9 220 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 CCDC182A6NF36 153 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 ZNF98A6NK75 572 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 PPP5D1E7EU14 171 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 H7BYZ3 331 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 I3L2K1 104 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 K7EIM0 57 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 DNASE2O00115 360 aaPredicted RBP0.9□□□□□ -2.27
CD44-212ENST00000524922 TNFRSF11BO00300 401 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 MFNGO00587 321 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 TAAR5O14804 337 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 MRASO14807 208 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 GEMIN2O14893 280 aaKnown RBP0.9□□□□□ -2.27
CD44-212ENST00000524922 RGS16O15492 202 aaPredicted RBP0.9□□□□□ -2.27
CD44-212ENST00000524922 DENRO43583 198 aaKnown RBP0.9□□□□□ -2.27
CD44-212ENST00000524922 SELENOFO60613 162 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 FCGR3BO75015 233 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 B3GALNT1O75752 331 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 DCTN3O75935 186 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 OR2J3O76001 311 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 SCGNO76038 276 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 FAM107AO95990 144 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 HPRT1P00492 218 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 HLA-DQB1P01920 261 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 SMR3BP02814 79 aaPredicted RBP0.9□□□□□ -2.27
CD44-212ENST00000524922 SERPINE2P07093 398 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 SLC25A4P12235 298 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 DEFA4P12838 97 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 NQO2P16083 231 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 IGFBP3P17936 291 aaPredicted RBP0.9□□□□□ -2.27
CD44-212ENST00000524922 RCC1P18754 421 aaPredicted RBP0.9□□□□□ -2.27
CD44-212ENST00000524922 NPPCP23582 126 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 DTYMKP23919 212 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 MAPK3P27361 379 aaPredicted RBP0.9□□□□□ -2.27
CD44-212ENST00000524922 DCKP27707 260 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 PRDX6P30041 224 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 SRIP30626 198 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 ZNF93P35789 620 aaPredicted RBP0.9□□□□□ -2.27
CD44-212ENST00000524922 PPP1CCP36873 323 aaKnown RBP0.9□□□□□ -2.27
CD44-212ENST00000524922 RPL13AP40429 203 aaKnown RBP0.9□□□□□ -2.27
CD44-212ENST00000524922 PSMD7P51665 324 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 NME5P56597 212 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 TAS2R43P59537 309 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 YPEL3P61236 119 aaPredicted RBP0.9□□□□□ -2.27
CD44-212ENST00000524922 PKIAP61925 76 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 PPP3R1P63098 170 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 HLA-DRB3P79483 266 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 PSG9Q00887 426 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 PRCDQ00LT1 54 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 DHRS2Q13268 280 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 EIF4EBP1Q13541 118 aaPredicted RBP0.9□□□□□ -2.27
CD44-212ENST00000524922 TNXAQ16473 311 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 MRPL23Q16540 153 aaKnown RBP0.9□□□□□ -2.27
CD44-212ENST00000524922 ESRGQ1W209 222 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 BSXQ3C1V8 233 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 PIGYQ3MUY2 71 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 TP53I3Q53FA7 332 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 AGKQ53H12 422 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 RPL39P5Q59GN2 51 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 YIF1BQ5BJH7 314 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 IBA57Q5T440 356 aaKnown RBP0.9□□□□□ -2.27
CD44-212ENST00000524922 MEDAGQ5VYS4 303 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 RAB12Q6IQ22 244 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 MZT2BQ6NZ67 158 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 AMTNQ6UX39 209 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 ZNF767PQ75MW2 155 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 TMEM179BQ7Z7N9 219 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 S100A7AQ86SG5 101 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 DHFR2Q86XF0 187 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 APRG1Q8IVJ8 170 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 SLC35F2Q8IXU6 374 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 H1FOOQ8IZA3 346 aaPredicted RBP0.9□□□□□ -2.27
CD44-212ENST00000524922 OR4B1Q8NGF8 309 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 OR4D5Q8NGN0 318 aa0.9□□□□□ -2.27
CD44-212ENST00000524922 OR8J1Q8NGP2 316 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms