RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 PPP1R2P41236 205 aa1.87□□□□□ -2.11
HMGB1P1-201ENST00000522557 CDK9P50750 372 aaKnown RBP1.87□□□□□ -2.11
HMGB1P1-201ENST00000522557 GNA12Q03113 381 aa1.87□□□□□ -2.11
HMGB1P1-201ENST00000522557 AKAP6Q13023 2319 aa1.87□□□□□ -2.11
HMGB1P1-201ENST00000522557 MIAQ16674 131 aa1.87□□□□□ -2.11
HMGB1P1-201ENST00000522557 ACOT6Q3I5F7 207 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P1-201ENST00000522557 BRMS1LQ5PSV4 323 aa1.87□□□□□ -2.11
HMGB1P1-201ENST00000522557 PPP1R2P3Q6NXS1 205 aa1.87□□□□□ -2.11
HMGB1P1-201ENST00000522557 CCDC121Q6ZUS5 278 aa1.87□□□□□ -2.11
HMGB1P1-201ENST00000522557 DYNAPQ8N1N2 210 aa1.87□□□□□ -2.11
HMGB1P1-201ENST00000522557 CCL4L1Q8NHW4 92 aa1.87□□□□□ -2.11
HMGB1P1-201ENST00000522557 TEX15Q9BXT5 2789 aa1.87□□□□□ -2.11
HMGB1P1-201ENST00000522557 TTTY12Q9BZ98 90 aa1.87□□□□□ -2.11
HMGB1P1-201ENST00000522557 VCX3BQ9H321 246 aa1.87□□□□□ -2.11
HMGB1P1-201ENST00000522557 CXorf21Q9HAI6 301 aa1.87□□□□□ -2.11
HMGB1P1-201ENST00000522557 ANGPT4Q9Y264 503 aa1.87□□□□□ -2.11
HMGB1P1-201ENST00000522557 FRYLO94915 3013 aa1.87□□□□□ -2.11
HMGB1P1-201ENST00000522557 MYH10P35580 1976 aa1.87□□□□□ -2.11
HMGB1P1-201ENST00000522557 TNRC6BQ9UPQ9 1833 aaKnown RBP1.87□□□□□ -2.11
HMGB1P1-201ENST00000522557 CPAMD8Q8IZJ3 1885 aa1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 TCHHQ07283 1943 aa1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 BHLHE40O14503 412 aa1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 UBE2L6O14933 153 aa1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 RPP14O95059 124 aaKnown RBP1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 OR5F1O95221 314 aa1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 RPS17P08708 135 aaKnown RBP1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 CASP1P29466 404 aa1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 FXYD7P58549 80 aa1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 KRTAP12-1P59990 96 aa1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 REEP5Q00765 189 aa1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 GUK1Q16774 197 aa1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 FAM173BQ6P4H8 233 aa1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 GLT6D1Q7Z4J2 308 aa1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 LINC00301Q8NCQ3 95 aa1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 TMEM35BQ8NCS4 154 aa1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 ST6GALNAC3Q8NDV1 305 aa1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 FDCSPQ8NFU4 85 aa1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 OR1L8Q8NGR8 309 aa1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 CT55Q8WUE5 264 aa1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 OR51V1Q9H2C8 321 aa1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 MRPL27Q9P0M9 148 aaKnown RBP1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 ATPIF1Q9UII2 106 aa1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 LSM5Q9Y4Y9 91 aaKnown RBP1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 ANKHD1Q8IWZ3 2542 aaKnown RBP1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 ACANP16112 2415 aa1.86□□□□□ -2.11
HMGB1P1-201ENST00000522557 MGAQ8IWI9 3026 aa1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 CENPEQ02224 2701 aa1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 ITPR2Q14571 2701 aa1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 DMDP11532 3685 aa1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 SONP18583 2426 aaKnown RBP1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 TMEM114B3SHH9 223 aa1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 ZNF878C9JN71 531 aa1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 CHP2O43745 196 aa1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 KLRC4O43908 158 aa1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 UQCRHP07919 91 aa1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 HIST1H1TP22492 207 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 TAS2R20P59543 309 aa1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 AP3S2P59780 193 aa1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 MRPS25P82663 173 aaKnown RBP1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 ZNF791Q3KP31 576 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 AGTRAPQ6RW13 159 aa1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 STX12Q86Y82 276 aa1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 OR13C8Q8NGS7 320 aa1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 SPACA4Q8TDM5 124 aa1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 PATE1Q8WXA2 126 aa1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 ROPN1LQ96C74 230 aa1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 CCDC42Q96M95 316 aa1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 ERMAPQ96PL5 475 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 SELENOSQ9BQE4 189 aa1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 MIEN1Q9BRT3 115 aa1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 XAGE1AQ9HD64 81 aa1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 FKBP14Q9NWM8 211 aa1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 RSL24D1Q9UHA3 163 aaKnown RBP1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 ANK1P16157 1881 aa1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 MUC22E2RYF6 1773 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P1-201ENST00000522557 FLNCQ14315 2725 aa1.84□□□□□ -2.11
HMGB1P1-201ENST00000522557 SPTBP11277 2137 aa1.84□□□□□ -2.11
HMGB1P1-201ENST00000522557 CLDN24A6NM45 220 aa1.84□□□□□ -2.11
HMGB1P1-201ENST00000522557 IFNA6P05013 189 aa1.84□□□□□ -2.11
HMGB1P1-201ENST00000522557 UCHL1P09936 223 aa1.84□□□□□ -2.11
HMGB1P1-201ENST00000522557 SDC4P31431 198 aa1.84□□□□□ -2.11
HMGB1P1-201ENST00000522557 CA5AP35218 305 aa1.84□□□□□ -2.11
HMGB1P1-201ENST00000522557 SLCO1A2P46721 670 aa1.84□□□□□ -2.11
HMGB1P1-201ENST00000522557 SULT1A1P50225 295 aa1.84□□□□□ -2.11
HMGB1P1-201ENST00000522557 VBP1P61758 197 aa1.84□□□□□ -2.11
HMGB1P1-201ENST00000522557 AP1S1P61966 158 aa1.84□□□□□ -2.11
HMGB1P1-201ENST00000522557 FABP9Q0Z7S8 132 aa1.84□□□□□ -2.11
HMGB1P1-201ENST00000522557 Q6ZS92 163 aa1.84□□□□□ -2.11
HMGB1P1-201ENST00000522557 SLC35F6Q8N357 371 aa1.84□□□□□ -2.11
HMGB1P1-201ENST00000522557 CLDN22Q8N7P3 220 aa1.84□□□□□ -2.11
HMGB1P1-201ENST00000522557 C12orf43Q96C57 262 aaKnown RBP1.84□□□□□ -2.11
HMGB1P1-201ENST00000522557 CNBD2Q96M20 576 aa1.84□□□□□ -2.11
HMGB1P1-201ENST00000522557 VPS29Q9UBQ0 182 aa1.84□□□□□ -2.11
HMGB1P1-201ENST00000522557 TSC2P49815 1807 aa1.84□□□□□ -2.12
HMGB1P1-201ENST00000522557 KALRNO60229 2985 aa1.83□□□□□ -2.12
HMGB1P1-201ENST00000522557 SORL1Q92673 2214 aa1.83□□□□□ -2.12
HMGB1P1-201ENST00000522557 TENM4Q6N022 2769 aa1.83□□□□□ -2.12
HMGB1P1-201ENST00000522557 A0A087WUJ7 227 aa1.83□□□□□ -2.12
HMGB1P1-201ENST00000522557 TRAV17A0A0B4J275 112 aa1.83□□□□□ -2.12
HMGB1P1-201ENST00000522557 ZNF705FA8MVS1 300 aaPredicted RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms