RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 PARP11Q9NR21 331 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 NDUFA4L2Q9NRX3 87 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.37□□□□□ -2.03
VPS13B-209ENST00000521559 TMEM14BQ9NUH8 114 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 NUDT15Q9NV35 164 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 COA4Q9NYJ1 87 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 CACFD1Q9UGQ2 172 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 LINC00527Q9UJ94 153 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 CELA1Q9UNI1 258 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 ZNF257Q9Y2Q1 563 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 FBXO7Q9Y3I1 522 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 OR51B2Q9Y5P1 312 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 WSB1Q9Y6I7 421 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 CRYBG3Q68DQ2 2970 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 SETXQ7Z333 2677 aaKnown RBP2.36□□□□□ -2.03
VPS13B-209ENST00000521559 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.36□□□□□ -2.03
VPS13B-209ENST00000521559 YLPM1P49750 1951 aaKnown RBP2.36□□□□□ -2.03
VPS13B-209ENST00000521559 TCRBV4S1A1TA0A5B7 111 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 IGLC7A0M8Q6 106 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 C7orf66A4D0T2 115 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 E7EUB6 86 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 INS-IGF2F8WCM5 200 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 H3BUA1 57 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 SOX15O60248 233 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 PITX3O75364 302 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 IFNA21P01568 189 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 IFNA17P01571 189 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 HLA-AP01891 365 aaKnown RBP2.36□□□□□ -2.03
VPS13B-209ENST00000521559 OPN1MWP04001 364 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 CRYGCP07315 174 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 SULT1A3P0DMM9 295 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 SULT1A4P0DMN0 295 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 OPN1MW2P0DN77 364 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 OPN1MW3P0DN78 364 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 OR13C7P0DN81 318 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 CD28P10747 220 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 HIST1H1BP16401 226 aaKnown RBP2.36□□□□□ -2.03
VPS13B-209ENST00000521559 PSMB8P28062 276 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 PSMB6P28072 239 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 RAB9AP51151 201 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 SPCS3P61009 180 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 ERHP84090 104 aaKnown RBP2.36□□□□□ -2.03
VPS13B-209ENST00000521559 PRCDQ00LT1 54 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 SMCO1Q147U7 214 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 OXA1LQ15070 435 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 RGS21Q2M5E4 152 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 KLK9Q2XQG4 91 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 ZNF506Q5JVG8 444 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 C9orf66Q5T8R8 295 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 C10orf99Q6UWK7 81 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 HSD17B13Q7Z5P4 300 aaPredicted RBP2.36□□□□□ -2.03
VPS13B-209ENST00000521559 NDUFA11Q86Y39 141 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 C12orf45Q8N5I9 185 aaPredicted RBP2.36□□□□□ -2.03
VPS13B-209ENST00000521559 TTC9CQ8N5M4 171 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 LFNGQ8NES3 379 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 OR5T1Q8NG75 326 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 OR10W1Q8NGF6 305 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 OR4X2Q8NGF9 303 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 SRSF12Q8WXF0 261 aaKnown RBP2.36□□□□□ -2.03
VPS13B-209ENST00000521559 TMEM37Q8WXS4 190 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 C2orf50Q96LR7 162 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 PHB2Q99623 299 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 CITED1Q99966 193 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 FAM103A1Q9BTL3 118 aaKnown RBP2.36□□□□□ -2.03
VPS13B-209ENST00000521559 PDCD10Q9BUL8 212 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 HINT2Q9BX68 163 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 KLK9Q9UKQ9 250 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 NAV3Q8IVL0 2385 aa2.36□□□□□ -2.03
VPS13B-209ENST00000521559 FLNAP21333 2647 aaKnown RBP2.36□□□□□ -2.03
VPS13B-209ENST00000521559 TEX15Q9BXT5 2789 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 MAST4O15021 2626 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 TRBV9A0A0B4J1U6 114 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 CEBPZOSA8MTT3 80 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 CYB5BO43169 146 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 MED6O75586 246 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 ADAP1O75689 374 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 PRH1P02810 166 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 TRGV3P03979 118 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 APELAP0DMC3 54 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 DEFA4P12838 97 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 CTRB1P17538 263 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 SUB1P53999 127 aaKnown RBP eCLIP2.35□□□□□ -2.03
VPS13B-209ENST00000521559 ATP5IP56385 69 aaPredicted RBP2.35□□□□□ -2.03
VPS13B-209ENST00000521559 TPPP2P59282 170 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 RPL23AP62750 156 aaKnown RBP2.35□□□□□ -2.03
VPS13B-209ENST00000521559 RHOGP84095 191 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 RUNX1Q01196 453 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 ATP5G2Q06055 141 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 WT1-ASQ06250 92 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 TNFRSF9Q07011 255 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 IL15RAQ13261 267 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 KLF5Q13887 457 aaPredicted RBP2.35□□□□□ -2.03
VPS13B-209ENST00000521559 TATDN3Q17R31 274 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 IAH1Q2TAA2 248 aaPredicted RBP2.35□□□□□ -2.03
VPS13B-209ENST00000521559 RNF212Q495C1 297 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 SPINK9Q5DT21 86 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 PVRIGQ6DKI7 326 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 CTRB2Q6GPI1 263 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 ZNF491Q8N8L2 437 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 NECAP1Q8NC96 275 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms