RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 UBQLN2Q9UHD9 624 aa8.87□□□□□ -0.99
HPS4-218ENST00000519774 U3KQE9 123 aa8.87□□□□□ -0.99
HPS4-218ENST00000519774 DNASE2O00115 360 aaPredicted RBP8.86□□□□□ -0.99
HPS4-218ENST00000519774 AGPAT2O15120 278 aa8.86□□□□□ -0.99
HPS4-218ENST00000519774 CFDP00746 253 aaPredicted RBP8.86□□□□□ -0.99
HPS4-218ENST00000519774 CD5P06127 495 aa8.86□□□□□ -0.99
HPS4-218ENST00000519774 FRMD6-AS1P0C7T7 363 aa8.86□□□□□ -0.99
HPS4-218ENST00000519774 NUP62P37198 522 aaPredicted RBP8.86□□□□□ -0.99
HPS4-218ENST00000519774 SELENOTP62341 195 aa8.86□□□□□ -0.99
HPS4-218ENST00000519774 PAFAH1B2P68402 229 aa8.86□□□□□ -0.99
HPS4-218ENST00000519774 BAXQ07812 192 aa8.86□□□□□ -0.99
HPS4-218ENST00000519774 CLINT1Q14677 625 aa8.86□□□□□ -0.99
HPS4-218ENST00000519774 ATP6V1FQ16864 119 aa8.86□□□□□ -0.99
HPS4-218ENST00000519774 LCE2CQ5TA81 110 aa8.86□□□□□ -0.99
HPS4-218ENST00000519774 C16orf54Q6UWD8 224 aa8.86□□□□□ -0.99
HPS4-218ENST00000519774 DEFB125Q8N687 156 aa8.86□□□□□ -0.99
HPS4-218ENST00000519774 OR5C1Q8NGR4 320 aa8.86□□□□□ -0.99
HPS4-218ENST00000519774 THAP6Q8TBB0 222 aa8.86□□□□□ -0.99
HPS4-218ENST00000519774 GLMPQ8WWB7 406 aa8.86□□□□□ -0.99
HPS4-218ENST00000519774 MGST2Q99735 147 aa8.86□□□□□ -0.99
HPS4-218ENST00000519774 MS4A6AQ9H2W1 248 aa8.86□□□□□ -0.99
HPS4-218ENST00000519774 TUBA4BQ9H853 241 aa8.86□□□□□ -0.99
HPS4-218ENST00000519774 PFDN2Q9UHV9 154 aa8.86□□□□□ -0.99
HPS4-218ENST00000519774 HELTA6NFD8 242 aa8.85□□□□□ -0.99
HPS4-218ENST00000519774 OR11H12B2RN74 326 aa8.85□□□□□ -0.99
HPS4-218ENST00000519774 BUB3O43684 328 aa8.85□□□□□ -0.99
HPS4-218ENST00000519774 GIPP09681 153 aaPredicted RBP8.85□□□□□ -0.99
HPS4-218ENST00000519774 OR5G3P0C626 314 aa8.85□□□□□ -0.99
HPS4-218ENST00000519774 FGF7P21781 194 aa8.85□□□□□ -0.99
HPS4-218ENST00000519774 RPL12P30050 165 aaKnown RBP8.85□□□□□ -0.99
HPS4-218ENST00000519774 CAMLGP49069 296 aa8.85□□□□□ -0.99
HPS4-218ENST00000519774 VWC2Q2TAL6 325 aa8.85□□□□□ -0.99
HPS4-218ENST00000519774 ZNF546Q86UE3 836 aa8.85□□□□□ -0.99
HPS4-218ENST00000519774 STPG3Q8N7X2 389 aa8.85□□□□□ -0.99
HPS4-218ENST00000519774 ASCL2Q99929 193 aa8.85□□□□□ -0.99
HPS4-218ENST00000519774 B9D2Q9BPU9 175 aa8.85□□□□□ -0.99
HPS4-218ENST00000519774 SRD5A3Q9H8P0 318 aa8.85□□□□□ -0.99
HPS4-218ENST00000519774 WDR83OSQ9Y284 106 aa8.85□□□□□ -0.99
HPS4-218ENST00000519774 RAP2BP61225 183 aa8.84□□□□□ -0.99
HPS4-218ENST00000519774 RAB31Q13636 194 aa8.84□□□□□ -0.99
HPS4-218ENST00000519774 ODF3L2Q3SX64 289 aa8.84□□□□□ -0.99
HPS4-218ENST00000519774 LCE2AQ5TA79 106 aaPredicted RBP8.84□□□□□ -0.99
HPS4-218ENST00000519774 MIC13Q5XKP0 118 aa8.84□□□□□ -0.99
HPS4-218ENST00000519774 SIGLEC15Q6ZMC9 328 aa8.84□□□□□ -0.99
HPS4-218ENST00000519774 GGTLC1Q9BX51 225 aa8.84□□□□□ -0.99
HPS4-218ENST00000519774 SMIM3Q9BZL3 60 aa8.84□□□□□ -0.99
HPS4-218ENST00000519774 ARL6Q9H0F7 186 aa8.84□□□□□ -0.99
HPS4-218ENST00000519774 SLC25A22Q9H936 323 aa8.84□□□□□ -0.99
HPS4-218ENST00000519774 SLC45A2Q9UMX9 530 aa8.84□□□□□ -0.99
HPS4-218ENST00000519774 HIGD1AQ9Y241 93 aa8.84□□□□□ -0.99
HPS4-218ENST00000519774 HSPB11Q9Y547 144 aa8.84□□□□□ -0.99
HPS4-218ENST00000519774 HYPMO75409 117 aa8.83□□□□□ -1
HPS4-218ENST00000519774 LYL1P12980 280 aa8.83□□□□□ -1
HPS4-218ENST00000519774 FGL1Q08830 312 aa8.83□□□□□ -1
HPS4-218ENST00000519774 OR8I2Q8N0Y5 310 aa8.83□□□□□ -1
HPS4-218ENST00000519774 FAM24BQ8N5W8 94 aa8.83□□□□□ -1
HPS4-218ENST00000519774 ASB13Q8WXK3 278 aa8.83□□□□□ -1
HPS4-218ENST00000519774 UHRF2Q96PU4 802 aa8.83□□□□□ -1
HPS4-218ENST00000519774 SCRT1Q9BWW7 348 aa8.83□□□□□ -1
HPS4-218ENST00000519774 MAP6D1Q9H9H5 199 aa8.83□□□□□ -1
HPS4-218ENST00000519774 C19orf73Q9NVV2 129 aa8.83□□□□□ -1
HPS4-218ENST00000519774 FBXL17Q9UF56 701 aa8.83□□□□□ -1
HPS4-218ENST00000519774 FXYD6-FXYD2A0A087WZ82 144 aa8.82□□□□□ -1
HPS4-218ENST00000519774 TRAV2A0A0B4J234 112 aa8.82□□□□□ -1
HPS4-218ENST00000519774 ZNF98A6NK75 572 aa8.82□□□□□ -1
HPS4-218ENST00000519774 H3BRN7 92 aa8.82□□□□□ -1
HPS4-218ENST00000519774 K7EQG2 157 aa8.82□□□□□ -1
HPS4-218ENST00000519774 COX7A2P2O60397 106 aa8.82□□□□□ -1
HPS4-218ENST00000519774 S100A7P31151 101 aa8.82□□□□□ -1
HPS4-218ENST00000519774 AP2S1P53680 142 aaPredicted RBP8.82□□□□□ -1
HPS4-218ENST00000519774 PLP1P60201 277 aa8.82□□□□□ -1
HPS4-218ENST00000519774 OPCMLQ14982 345 aa8.82□□□□□ -1
HPS4-218ENST00000519774 Q5BKY6 102 aa8.82□□□□□ -1
HPS4-218ENST00000519774 C1orf194Q5T5A4 169 aa8.82□□□□□ -1
HPS4-218ENST00000519774 LEMD1Q68G75 181 aa8.82□□□□□ -1
HPS4-218ENST00000519774 APRG1Q8IVJ8 170 aa8.82□□□□□ -1
HPS4-218ENST00000519774 OR2T35Q8NGX2 323 aa8.82□□□□□ -1
HPS4-218ENST00000519774 ATP5SQ99766 215 aa8.82□□□□□ -1
HPS4-218ENST00000519774 SLC25A39Q9BZJ4 359 aaPredicted RBP8.82□□□□□ -1
HPS4-218ENST00000519774 ARV1Q9H2C2 271 aa8.82□□□□□ -1
HPS4-218ENST00000519774 SLC25A32Q9H2D1 315 aa8.82□□□□□ -1
HPS4-218ENST00000519774 A8MZ25 164 aa8.81□□□□□ -1
HPS4-218ENST00000519774 ZNF688P0C7X2 276 aa8.81□□□□□ -1
HPS4-218ENST00000519774 B2MP61769 119 aa8.81□□□□□ -1
HPS4-218ENST00000519774 ZNF124Q15973 351 aa8.81□□□□□ -1
HPS4-218ENST00000519774 PXDC1Q5TGL8 231 aa8.81□□□□□ -1
HPS4-218ENST00000519774 Q6ZRG5 221 aa8.81□□□□□ -1
HPS4-218ENST00000519774 SBSPONQ8IVN8 264 aa8.81□□□□□ -1
HPS4-218ENST00000519774 DCANP1Q8TF63 244 aa8.81□□□□□ -1
HPS4-218ENST00000519774 CITED4Q96RK1 184 aa8.81□□□□□ -1
HPS4-218ENST00000519774 SHANK2-AS3Q9BTD1 123 aa8.81□□□□□ -1
HPS4-218ENST00000519774 NPCDR1Q9BY65 106 aa8.81□□□□□ -1
HPS4-218ENST00000519774 NRN1Q9NPD7 142 aa8.81□□□□□ -1
HPS4-218ENST00000519774 PXMP4Q9Y6I8 212 aa8.81□□□□□ -1
HPS4-218ENST00000519774 PRKDCP78527 4128 aaKnown RBP8.81□□□□□ -1
HPS4-218ENST00000519774 MPDU1O75352 247 aa8.8□□□□□ -1
HPS4-218ENST00000519774 IFNA5P01569 189 aa8.8□□□□□ -1
HPS4-218ENST00000519774 GALR1P47211 349 aa8.8□□□□□ -1
HPS4-218ENST00000519774 RPL29P47914 159 aaKnown RBP8.8□□□□□ -1
HPS4-218ENST00000519774 CMC4P56277 68 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms