RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 Q9H3A6 140 aa13.23□□□□□ -0.29
PCDHGA11-202ENST00000518882 TP73-AS1Q9UF72 201 aa13.23□□□□□ -0.29
PCDHGA11-202ENST00000518882 Q9UFV3 132 aa13.23□□□□□ -0.29
PCDHGA11-202ENST00000518882 TCRAP04437 139 aa13.23□□□□□ -0.29
PCDHGA11-202ENST00000518882 ETFRF1Q6IPR1 90 aa13.23□□□□□ -0.29
PCDHGA11-202ENST00000518882 C5orf17Q8NAS9 161 aa13.23□□□□□ -0.29
PCDHGA11-202ENST00000518882 TMEM116Q8NCL8 245 aa13.23□□□□□ -0.29
PCDHGA11-202ENST00000518882 MRPS16Q9Y3D3 137 aaKnown RBP13.23□□□□□ -0.29
PCDHGA11-202ENST00000518882 IGHV2-26A0A0B4J1V2 119 aa13.22□□□□□ -0.29
PCDHGA11-202ENST00000518882 C16orf97H3BN30 126 aa13.22□□□□□ -0.29
PCDHGA11-202ENST00000518882 TCF21O43680 179 aa13.22□□□□□ -0.29
PCDHGA11-202ENST00000518882 IGHV1-8P0DP01 117 aa13.22□□□□□ -0.29
PCDHGA11-202ENST00000518882 MC5RP33032 325 aa13.22□□□□□ -0.29
PCDHGA11-202ENST00000518882 TMEM155Q4W5P6 130 aa13.22□□□□□ -0.29
PCDHGA11-202ENST00000518882 LINC00173Q6ZV60 143 aa13.22□□□□□ -0.29
PCDHGA11-202ENST00000518882 FMC1Q96HJ9 113 aa13.22□□□□□ -0.29
PCDHGA11-202ENST00000518882 TRAV8-1A0A0A6YYK1 113 aa13.22□□□□□ -0.29
PCDHGA11-202ENST00000518882 A8MWL6 223 aa13.22□□□□□ -0.29
PCDHGA11-202ENST00000518882 P01737 135 aa13.22□□□□□ -0.29
PCDHGA11-202ENST00000518882 OR4F17Q8NGA8 305 aa13.22□□□□□ -0.29
PCDHGA11-202ENST00000518882 RPL27AP46776 148 aaKnown RBP13.21□□□□□ -0.29
PCDHGA11-202ENST00000518882 LGALS7P47929 136 aa13.21□□□□□ -0.29
PCDHGA11-202ENST00000518882 IGF2-ASQ6U949 168 aa13.21□□□□□ -0.29
PCDHGA11-202ENST00000518882 UNQ5815/PRO19632Q6UWF5 114 aa13.21□□□□□ -0.29
PCDHGA11-202ENST00000518882 PRSS33Q8NF86 280 aa13.21□□□□□ -0.29
PCDHGA11-202ENST00000518882 CT83Q5H943 113 aa13.2□□□□□ -0.3
PCDHGA11-202ENST00000518882 TMEM70Q9BUB7 260 aa13.2□□□□□ -0.3
PCDHGA11-202ENST00000518882 ZNF492Q9P255 531 aa13.2□□□□□ -0.3
PCDHGA11-202ENST00000518882 ZNF835Q9Y2P0 537 aa13.2□□□□□ -0.3
PCDHGA11-202ENST00000518882 PIEZO2Q9H5I5 2752 aa13.2□□□□□ -0.3
PCDHGA11-202ENST00000518882 IGHV1-24A0A0C4DH33 117 aa13.2□□□□□ -0.3
PCDHGA11-202ENST00000518882 CRYGBP07316 175 aa13.2□□□□□ -0.3
PCDHGA11-202ENST00000518882 TEX45Q8NA69 505 aa13.2□□□□□ -0.3
PCDHGA11-202ENST00000518882 C8orf46Q8TAG6 207 aa13.2□□□□□ -0.3
PCDHGA11-202ENST00000518882 PPP1R14DQ9NXH3 145 aa13.2□□□□□ -0.3
PCDHGA11-202ENST00000518882 ZNF292O60281 2723 aa13.2□□□□□ -0.3
PCDHGA11-202ENST00000518882 CIARTQ8N365 385 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA11-202ENST00000518882 TMEM133Q9H2Q1 129 aa13.19□□□□□ -0.3
PCDHGA11-202ENST00000518882 POLEQ07864 2286 aa13.19□□□□□ -0.3
PCDHGA11-202ENST00000518882 TOX4O94842 621 aa13.19□□□□□ -0.3
PCDHGA11-202ENST00000518882 RBPMS2Q6ZRY4 209 aaKnown RBP13.19□□□□□ -0.3
PCDHGA11-202ENST00000518882 C22orf15Q8WYQ4 148 aa13.19□□□□□ -0.3
PCDHGA11-202ENST00000518882 RBM14Q96PK6 669 aaKnown RBP13.19□□□□□ -0.3
PCDHGA11-202ENST00000518882 SIGLEC9Q9Y336 463 aa13.19□□□□□ -0.3
PCDHGA11-202ENST00000518882 GVINP1Q7Z2Y8 2422 aa13.19□□□□□ -0.3
PCDHGA11-202ENST00000518882 C20orf202A1L168 122 aa13.18□□□□□ -0.3
PCDHGA11-202ENST00000518882 CCL25O15444 150 aa13.18□□□□□ -0.3
PCDHGA11-202ENST00000518882 CRXO43186 299 aaPredicted RBP13.18□□□□□ -0.3
PCDHGA11-202ENST00000518882 PLP1P60201 277 aa13.18□□□□□ -0.3
PCDHGA11-202ENST00000518882 Q86TA4 180 aa13.18□□□□□ -0.3
PCDHGA11-202ENST00000518882 EXOC3-AS1Q8N2X6 119 aa13.18□□□□□ -0.3
PCDHGA11-202ENST00000518882 RNASE6Q93091 150 aaKnown RBP13.18□□□□□ -0.3
PCDHGA11-202ENST00000518882 SH3BGRL2Q9UJC5 107 aa13.18□□□□□ -0.3
PCDHGA11-202ENST00000518882 CSMD1Q96PZ7 3565 aa13.18□□□□□ -0.3
PCDHGA11-202ENST00000518882 APC2O95996 2303 aa13.18□□□□□ -0.3
PCDHGA11-202ENST00000518882 ACACAQ13085 2346 aa13.18□□□□□ -0.3
PCDHGA11-202ENST00000518882 OR4C46A6NHA9 309 aa13.18□□□□□ -0.3
PCDHGA11-202ENST00000518882 TEX22C9J3V5 150 aa13.18□□□□□ -0.3
PCDHGA11-202ENST00000518882 NPIPB6E9PJ23 425 aa13.18□□□□□ -0.3
PCDHGA11-202ENST00000518882 OVOL3O00110 214 aa13.18□□□□□ -0.3
PCDHGA11-202ENST00000518882 IGLV2-11P01706 119 aa13.18□□□□□ -0.3
PCDHGA11-202ENST00000518882 PRB4P10163 310 aaPredicted RBP13.18□□□□□ -0.3
PCDHGA11-202ENST00000518882 PSG1P11464 419 aa13.18□□□□□ -0.3
PCDHGA11-202ENST00000518882 LYZP61626 148 aa13.18□□□□□ -0.3
PCDHGA11-202ENST00000518882 ASCL5Q7RTU5 278 aa13.18□□□□□ -0.3
PCDHGA11-202ENST00000518882 ORAOV1Q8WV07 137 aa13.18□□□□□ -0.3
PCDHGA11-202ENST00000518882 DAZAP1Q96EP5 407 aaKnown RBP13.18□□□□□ -0.3
PCDHGA11-202ENST00000518882 KAAG1Q9UBP8 84 aa13.18□□□□□ -0.3
PCDHGA11-202ENST00000518882 SOX21Q9Y651 276 aaPredicted RBP13.18□□□□□ -0.3
PCDHGA11-202ENST00000518882 ZNF138P52744 262 aa13.17□□□□□ -0.3
PCDHGA11-202ENST00000518882 MUC15Q8N387 334 aa13.17□□□□□ -0.3
PCDHGA11-202ENST00000518882 GFRA4Q9GZZ7 299 aa13.17□□□□□ -0.3
PCDHGA11-202ENST00000518882 HIGD1AQ9Y241 93 aa13.17□□□□□ -0.3
PCDHGA11-202ENST00000518882 F11RQ9Y624 299 aaKnown RBP13.17□□□□□ -0.3
PCDHGA11-202ENST00000518882 LOC102724200A0A096LPH7 203 aaPredicted RBP13.16□□□□□ -0.3
PCDHGA11-202ENST00000518882 ZNF785A8K8V0 405 aa13.16□□□□□ -0.3
PCDHGA11-202ENST00000518882 SYS1-DBNDD2H3BUS1 97 aa13.16□□□□□ -0.3
PCDHGA11-202ENST00000518882 APOHP02749 345 aaPredicted RBP13.16□□□□□ -0.3
PCDHGA11-202ENST00000518882 IGLC1P0CG04 106 aa13.16□□□□□ -0.3
PCDHGA11-202ENST00000518882 SFTPCP11686 197 aa13.16□□□□□ -0.3
PCDHGA11-202ENST00000518882 CHCHD1Q96BP2 118 aaKnown RBP13.16□□□□□ -0.3
PCDHGA11-202ENST00000518882 ASCL2Q99929 193 aa13.16□□□□□ -0.3
PCDHGA11-202ENST00000518882 TPRP12270 2363 aaKnown RBP13.16□□□□□ -0.3
PCDHGA11-202ENST00000518882 DCHS2Q6V1P9 2916 aa13.16□□□□□ -0.3
PCDHGA11-202ENST00000518882 hDV102S1A0JD36 115 aa13.16□□□□□ -0.3
PCDHGA11-202ENST00000518882 COL8A1P27658 744 aa13.16□□□□□ -0.3
PCDHGA11-202ENST00000518882 RELQ04864 619 aaPredicted RBP13.16□□□□□ -0.3
PCDHGA11-202ENST00000518882 GOLT1AQ6ZVE7 132 aa13.16□□□□□ -0.3
PCDHGA11-202ENST00000518882 PRNTQ86SH4 94 aa13.16□□□□□ -0.3
PCDHGA11-202ENST00000518882 SLC25A39Q9BZJ4 359 aaPredicted RBP13.16□□□□□ -0.3
PCDHGA11-202ENST00000518882 COX11Q9Y6N1 276 aa13.16□□□□□ -0.3
PCDHGA11-202ENST00000518882 IGLV1-47P01700 117 aa13.15□□□□□ -0.3
PCDHGA11-202ENST00000518882 PPP1R27Q86WC6 154 aa13.15□□□□□ -0.3
PCDHGA11-202ENST00000518882 OTORQ9NRC9 128 aa13.15□□□□□ -0.3
PCDHGA11-202ENST00000518882 IGHV1-3A0A0C4DH29 117 aa13.15□□□□□ -0.3
PCDHGA11-202ENST00000518882 LEPROTL1O95214 131 aa13.15□□□□□ -0.3
PCDHGA11-202ENST00000518882 MCRIP2Q9BUT9 160 aaKnown RBP13.15□□□□□ -0.3
PCDHGA11-202ENST00000518882 LRBAP50851 2863 aa13.14□□□□□ -0.31
PCDHGA11-202ENST00000518882 IGHV1-69-2A0A0G2JMI3 117 aa13.14□□□□□ -0.31
PCDHGA11-202ENST00000518882 CHEK1O14757 476 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms