RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 CARD19Q96LW7 228 aa1.03□□□□□ -2.24
SQLE-202ENST00000518604 BIN3Q9NQY0 253 aa1.03□□□□□ -2.24
SQLE-202ENST00000518604 LYRM2Q9NU23 88 aaPredicted RBP1.03□□□□□ -2.24
SQLE-202ENST00000518604 ZCCHC11Q5TAX3 1644 aaKnown RBP1.03□□□□□ -2.24
SQLE-202ENST00000518604 ECM29Q5VYK3 1845 aa1.03□□□□□ -2.25
SQLE-202ENST00000518604 CCDC88AQ3V6T2 1871 aa1.03□□□□□ -2.25
SQLE-202ENST00000518604 TRBV6-7A0A0A0MS04 114 aa1.02□□□□□ -2.25
SQLE-202ENST00000518604 GNG14A0A1W2PPG7 69 aa1.02□□□□□ -2.25
SQLE-202ENST00000518604 PPP5D1E7EU14 171 aa1.02□□□□□ -2.25
SQLE-202ENST00000518604 H3BQV1 296 aa1.02□□□□□ -2.25
SQLE-202ENST00000518604 TECTAO75443 2155 aa1.02□□□□□ -2.25
SQLE-202ENST00000518604 MED1Q15648 1581 aaPredicted RBP1.02□□□□□ -2.25
SQLE-202ENST00000518604 FMN1Q68DA7 1419 aa1.02□□□□□ -2.25
SQLE-202ENST00000518604 SMIM15Q7Z3B0 74 aa1.02□□□□□ -2.25
SQLE-202ENST00000518604 ALPK2Q86TB3 2170 aa1.02□□□□□ -2.25
SQLE-202ENST00000518604 OR13D1Q8NGV5 346 aa1.02□□□□□ -2.25
SQLE-202ENST00000518604 OR10J5Q8NHC4 309 aa1.02□□□□□ -2.25
SQLE-202ENST00000518604 STAG3L4Q8TBR4 150 aa1.02□□□□□ -2.25
SQLE-202ENST00000518604 SFT2D1Q8WV19 159 aa1.02□□□□□ -2.25
SQLE-202ENST00000518604 ARAP1Q96P48 1450 aa1.02□□□□□ -2.25
SQLE-202ENST00000518604 LYSMD1Q96S90 227 aa1.02□□□□□ -2.25
SQLE-202ENST00000518604 TVP23BQ9NYZ1 205 aa1.02□□□□□ -2.25
SQLE-202ENST00000518604 DOCK4Q8N1I0 1966 aa1.01□□□□□ -2.25
SQLE-202ENST00000518604 ANAPC1Q9H1A4 1944 aa1.01□□□□□ -2.25
SQLE-202ENST00000518604 UBR2Q8IWV8 1755 aa1.01□□□□□ -2.25
SQLE-202ENST00000518604 ARHGEF28Q8N1W1 1705 aaKnown RBP1.01□□□□□ -2.25
SQLE-202ENST00000518604 ADGBQ8N7X0 1667 aa1.01□□□□□ -2.25
SQLE-202ENST00000518604 YTHDC2Q9H6S0 1430 aaKnown RBP1.01□□□□□ -2.25
SQLE-202ENST00000518604 A0A087X0T9 212 aa1.01□□□□□ -2.25
SQLE-202ENST00000518604 TRAV12-1A0A0B4J245 112 aa1.01□□□□□ -2.25
SQLE-202ENST00000518604 A0A1W2PRE2 83 aa1.01□□□□□ -2.25
SQLE-202ENST00000518604 PRORSD1PA6NEY8 169 aa1.01□□□□□ -2.25
SQLE-202ENST00000518604 G3V2T6 193 aa1.01□□□□□ -2.25
SQLE-202ENST00000518604 M0R2N4 97 aa1.01□□□□□ -2.25
SQLE-202ENST00000518604 M0R378 163 aa1.01□□□□□ -2.25
SQLE-202ENST00000518604 IFNA21P01568 189 aa1.01□□□□□ -2.25
SQLE-202ENST00000518604 IDO1P14902 403 aa1.01□□□□□ -2.25
SQLE-202ENST00000518604 PHBP35232 272 aa1.01□□□□□ -2.25
SQLE-202ENST00000518604 INSL3P51460 131 aa1.01□□□□□ -2.25
SQLE-202ENST00000518604 TSNQ15631 228 aaKnown RBP1.01□□□□□ -2.25
SQLE-202ENST00000518604 ALX1Q15699 326 aa1.01□□□□□ -2.25
SQLE-202ENST00000518604 LTC4SQ16873 150 aa1.01□□□□□ -2.25
SQLE-202ENST00000518604 C3orf56Q8N813 242 aa1.01□□□□□ -2.25
SQLE-202ENST00000518604 TEX47Q8TBZ9 253 aa1.01□□□□□ -2.25
SQLE-202ENST00000518604 PLEKHB2Q96CS7 222 aa1.01□□□□□ -2.25
SQLE-202ENST00000518604 RMND5BQ96G75 393 aaPredicted RBP1.01□□□□□ -2.25
SQLE-202ENST00000518604 POLEQ07864 2286 aa1.01□□□□□ -2.25
SQLE-202ENST00000518604 NUP210LQ5VU65 1888 aa1.01□□□□□ -2.25
SQLE-202ENST00000518604 ADGRB2O60241 1585 aa1□□□□□ -2.25
SQLE-202ENST00000518604 TECPR2O15040 1411 aa1□□□□□ -2.25
SQLE-202ENST00000518604 CD109Q6YHK3 1445 aa1□□□□□ -2.25
SQLE-202ENST00000518604 H7C1C5 153 aa1□□□□□ -2.25
SQLE-202ENST00000518604 LYZL6O75951 148 aa1□□□□□ -2.25
SQLE-202ENST00000518604 MGST1P10620 155 aaKnown RBP1□□□□□ -2.25
SQLE-202ENST00000518604 ZNF93P35789 620 aaPredicted RBP1□□□□□ -2.25
SQLE-202ENST00000518604 TCTAP57738 103 aa1□□□□□ -2.25
SQLE-202ENST00000518604 LCN6P62502 163 aa1□□□□□ -2.25
SQLE-202ENST00000518604 PRB3Q04118 309 aaPredicted RBP1□□□□□ -2.25
SQLE-202ENST00000518604 RRN3P1Q2M238 152 aa1□□□□□ -2.25
SQLE-202ENST00000518604 RNASE10Q5GAN6 216 aaKnown RBP1□□□□□ -2.25
SQLE-202ENST00000518604 AKR1C8PQ5T2L2 129 aa1□□□□□ -2.25
SQLE-202ENST00000518604 STX19Q8N4C7 294 aa1□□□□□ -2.25
SQLE-202ENST00000518604 ST6GALNAC3Q8NDV1 305 aa1□□□□□ -2.25
SQLE-202ENST00000518604 C4orf3Q8WVX3 66 aa1□□□□□ -2.25
SQLE-202ENST00000518604 ZHX1-C8orf76Q96EF9 292 aa1□□□□□ -2.25
SQLE-202ENST00000518604 ZC2HC1AQ96GY0 325 aa1□□□□□ -2.25
SQLE-202ENST00000518604 LRTM1Q9HBL6 345 aa1□□□□□ -2.25
SQLE-202ENST00000518604 RASL12Q9NYN1 266 aa1□□□□□ -2.25
SQLE-202ENST00000518604 ROS1P08922 2347 aa1□□□□□ -2.25
SQLE-202ENST00000518604 ZCCHC6Q5VYS8 1495 aaKnown RBP0.99□□□□□ -2.25
SQLE-202ENST00000518604 UHRF1BP1Q6BDS2 1440 aa0.99□□□□□ -2.25
SQLE-202ENST00000518604 OBSL1O75147 1896 aa0.99□□□□□ -2.25
SQLE-202ENST00000518604 SBF1O95248 1867 aa0.99□□□□□ -2.25
SQLE-202ENST00000518604 MAP1LC3B2A6NCE7 125 aa0.99□□□□□ -2.25
SQLE-202ENST00000518604 H7BYZ3 331 aa0.99□□□□□ -2.25
SQLE-202ENST00000518604 TAX1BP3O14907 124 aa0.99□□□□□ -2.25
SQLE-202ENST00000518604 IFNA7P01567 189 aa0.99□□□□□ -2.25
SQLE-202ENST00000518604 CRHP06850 196 aa0.99□□□□□ -2.25
SQLE-202ENST00000518604 Q8N814 137 aa0.99□□□□□ -2.25
SQLE-202ENST00000518604 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.99□□□□□ -2.25
SQLE-202ENST00000518604 GPX7Q96SL4 187 aaPredicted RBP0.99□□□□□ -2.25
SQLE-202ENST00000518604 HIST1H2BLQ99880 126 aa0.99□□□□□ -2.25
SQLE-202ENST00000518604 MAP1LC3BQ9GZQ8 125 aa0.99□□□□□ -2.25
SQLE-202ENST00000518604 PBOV1Q9GZY1 135 aa0.99□□□□□ -2.25
SQLE-202ENST00000518604 TMEM126AQ9H061 195 aa0.99□□□□□ -2.25
SQLE-202ENST00000518604 C19orf12Q9NSK7 152 aa0.99□□□□□ -2.25
SQLE-202ENST00000518604 OR52A1Q9UKL2 312 aa0.99□□□□□ -2.25
SQLE-202ENST00000518604 PCTPQ9UKL6 214 aa0.99□□□□□ -2.25
SQLE-202ENST00000518604 SSR3Q9UNL2 185 aa0.99□□□□□ -2.25
SQLE-202ENST00000518604 ASB4Q9Y574 426 aa0.99□□□□□ -2.25
SQLE-202ENST00000518604 RIMBP3CA6NJZ7 1639 aa0.99□□□□□ -2.25
SQLE-202ENST00000518604 RIMBP3BA6NNM3 1639 aa0.99□□□□□ -2.25
SQLE-202ENST00000518604 TRPM1Q7Z4N2 1603 aa0.99□□□□□ -2.25
SQLE-202ENST00000518604 RIMBP3Q9UFD9 1639 aa0.99□□□□□ -2.25
SQLE-202ENST00000518604 MICAL3Q7RTP6 2002 aa0.98□□□□□ -2.25
SQLE-202ENST00000518604 EML6Q6ZMW3 1958 aa0.98□□□□□ -2.25
SQLE-202ENST00000518604 RIIAD1A6NNX1 92 aa0.98□□□□□ -2.25
SQLE-202ENST00000518604 C1orf196B1AJZ1 125 aa0.98□□□□□ -2.25
SQLE-202ENST00000518604 TMEM256-PLSCR3K7ERE1 68 aa0.98□□□□□ -2.25
SQLE-202ENST00000518604 CYB5BO43169 146 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms