RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 PRR27Q6MZM9 219 aa13.92□□□□□ -0.18
SNX2-213ENST00000514949 FBXL15Q9H469 300 aa13.92□□□□□ -0.18
SNX2-213ENST00000514949 A8MWL6 223 aa13.91□□□□□ -0.18
SNX2-213ENST00000514949 LYNX1G3V0Z9 82 aa13.91□□□□□ -0.18
SNX2-213ENST00000514949 LYNX1P0DP58 116 aa13.91□□□□□ -0.18
SNX2-213ENST00000514949 HOXB4P17483 251 aaPredicted RBP13.91□□□□□ -0.18
SNX2-213ENST00000514949 ASPHD1Q5U4P2 390 aa13.91□□□□□ -0.18
SNX2-213ENST00000514949 PAM16Q9Y3D7 125 aa13.91□□□□□ -0.18
SNX2-213ENST00000514949 PMCHP20382 165 aa13.91□□□□□ -0.18
SNX2-213ENST00000514949 LINC00322Q6ZN03 302 aaPredicted RBP13.91□□□□□ -0.18
SNX2-213ENST00000514949 SLC25A39Q9BZJ4 359 aaPredicted RBP13.91□□□□□ -0.18
SNX2-213ENST00000514949 NPIPB6E9PJ23 425 aa13.9□□□□□ -0.18
SNX2-213ENST00000514949 C3orf79P0CE67 100 aa13.9□□□□□ -0.18
SNX2-213ENST00000514949 APELAP0DMC3 54 aa13.9□□□□□ -0.18
SNX2-213ENST00000514949 ZNF705AQ6ZN79 300 aaPredicted RBP13.9□□□□□ -0.18
SNX2-213ENST00000514949 MUC6Q6W4X9 2439 aa13.9□□□□□ -0.18
SNX2-213ENST00000514949 TCAPO15273 167 aa13.9□□□□□ -0.18
SNX2-213ENST00000514949 SIAH2O43255 324 aa13.9□□□□□ -0.18
SNX2-213ENST00000514949 IGKV1-17P01599 117 aa13.9□□□□□ -0.18
SNX2-213ENST00000514949 LIPFP07098 398 aa13.9□□□□□ -0.18
SNX2-213ENST00000514949 ZNF672Q499Z4 452 aaPredicted RBP13.9□□□□□ -0.18
SNX2-213ENST00000514949 OR11H6Q8NGC7 330 aa13.9□□□□□ -0.18
SNX2-213ENST00000514949 TLN1Q9Y490 2541 aaKnown RBP13.89□□□□□ -0.19
SNX2-213ENST00000514949 IGHV3-21A0A0B4J1V1 117 aa13.89□□□□□ -0.19
SNX2-213ENST00000514949 COX7A1P24310 79 aa13.89□□□□□ -0.19
SNX2-213ENST00000514949 HBBP68871 147 aa13.89□□□□□ -0.19
SNX2-213ENST00000514949 OR8B3Q8NGG8 313 aa13.89□□□□□ -0.19
SNX2-213ENST00000514949 LINC01560Q8TB33 94 aa13.89□□□□□ -0.19
SNX2-213ENST00000514949 OR8B2Q96RD0 313 aa13.89□□□□□ -0.19
SNX2-213ENST00000514949 WNT10AQ9GZT5 417 aa13.89□□□□□ -0.19
SNX2-213ENST00000514949 GSX1Q9H4S2 264 aaPredicted RBP13.89□□□□□ -0.19
SNX2-213ENST00000514949 RNF24Q9Y225 148 aa13.89□□□□□ -0.19
SNX2-213ENST00000514949 P01737 135 aa13.88□□□□□ -0.19
SNX2-213ENST00000514949 LDLRAD2Q5SZI1 272 aa13.88□□□□□ -0.19
SNX2-213ENST00000514949 LEMD1Q68G75 181 aa13.88□□□□□ -0.19
SNX2-213ENST00000514949 C16orf54Q6UWD8 224 aa13.88□□□□□ -0.19
SNX2-213ENST00000514949 LHFPL4Q7Z7J7 247 aa13.88□□□□□ -0.19
SNX2-213ENST00000514949 GTSF1Q8WW33 167 aa13.88□□□□□ -0.19
SNX2-213ENST00000514949 RASL11BQ9BPW5 248 aa13.88□□□□□ -0.19
SNX2-213ENST00000514949 ABCA1O95477 2261 aa13.88□□□□□ -0.19
SNX2-213ENST00000514949 K7EIM0 57 aa13.88□□□□□ -0.19
SNX2-213ENST00000514949 IGLV2-11P01706 119 aa13.88□□□□□ -0.19
SNX2-213ENST00000514949 LYZP61626 148 aa13.88□□□□□ -0.19
SNX2-213ENST00000514949 BORCS7Q96B45 105 aa13.88□□□□□ -0.19
SNX2-213ENST00000514949 SGK494Q96LW2 274 aa13.88□□□□□ -0.19
SNX2-213ENST00000514949 PRB3Q04118 309 aaPredicted RBP13.87□□□□□ -0.19
SNX2-213ENST00000514949 FAM162BQ5T6X4 162 aa13.87□□□□□ -0.19
SNX2-213ENST00000514949 Q86TA4 180 aa13.87□□□□□ -0.19
SNX2-213ENST00000514949 FAM19A2Q8N3H0 131 aa13.87□□□□□ -0.19
SNX2-213ENST00000514949 NPBQ8NG41 125 aa13.87□□□□□ -0.19
SNX2-213ENST00000514949 TIMM23O14925 209 aa13.87□□□□□ -0.19
SNX2-213ENST00000514949 NDUFA3O95167 84 aa13.87□□□□□ -0.19
SNX2-213ENST00000514949 FOXA3P55318 350 aaPredicted RBP13.87□□□□□ -0.19
SNX2-213ENST00000514949 RBPMS2Q6ZRY4 209 aaKnown RBP13.87□□□□□ -0.19
SNX2-213ENST00000514949 CFHR4Q92496 578 aa13.87□□□□□ -0.19
SNX2-213ENST00000514949 SHANK2-AS3Q9BTD1 123 aa13.87□□□□□ -0.19
SNX2-213ENST00000514949 ANKHD1Q8IWZ3 2542 aaKnown RBP13.86□□□□□ -0.19
SNX2-213ENST00000514949 HTR1DP28221 377 aa13.86□□□□□ -0.19
SNX2-213ENST00000514949 CAMPP49913 170 aa13.86□□□□□ -0.19
SNX2-213ENST00000514949 TCF24Q7RTU0 167 aa13.86□□□□□ -0.19
SNX2-213ENST00000514949 LYPD1Q8N2G4 141 aa13.86□□□□□ -0.19
SNX2-213ENST00000514949 SCNM1Q9BWG6 230 aa13.86□□□□□ -0.19
SNX2-213ENST00000514949 DPM3Q9P2X0 92 aa13.86□□□□□ -0.19
SNX2-213ENST00000514949 RPH3ALQ9UNE2 315 aa13.86□□□□□ -0.19
SNX2-213ENST00000514949 HSBP1O75506 76 aa13.85□□□□□ -0.19
SNX2-213ENST00000514949 DAZAP1Q96EP5 407 aaKnown RBP13.85□□□□□ -0.19
SNX2-213ENST00000514949 SSBP4Q9BWG4 385 aaPredicted RBP13.85□□□□□ -0.19
SNX2-213ENST00000514949 ZZEF1O43149 2961 aa13.85□□□□□ -0.19
SNX2-213ENST00000514949 PTPRQQ9UMZ3 2332 aa13.85□□□□□ -0.19
SNX2-213ENST00000514949 H3BRN7 92 aa13.85□□□□□ -0.19
SNX2-213ENST00000514949 NBR2O15453 112 aa13.85□□□□□ -0.19
SNX2-213ENST00000514949 IGLC2P0DOY2 106 aa13.85□□□□□ -0.19
SNX2-213ENST00000514949 FOXC1Q12948 553 aa13.85□□□□□ -0.19
SNX2-213ENST00000514949 PLGLAQ15195 96 aa13.85□□□□□ -0.19
SNX2-213ENST00000514949 PMCHL1Q16048 86 aa13.85□□□□□ -0.19
SNX2-213ENST00000514949 DMRTA1Q5VZB9 504 aa13.85□□□□□ -0.19
SNX2-213ENST00000514949 TRBV19A0A075B6N1 114 aa13.84□□□□□ -0.19
SNX2-213ENST00000514949 FAM181BA6NEQ2 426 aa13.84□□□□□ -0.19
SNX2-213ENST00000514949 H3BTX0 84 aa13.84□□□□□ -0.19
SNX2-213ENST00000514949 M0R1W7 72 aa13.84□□□□□ -0.19
SNX2-213ENST00000514949 NTF3P20783 257 aa13.84□□□□□ -0.19
SNX2-213ENST00000514949 SPATA45Q537H7 98 aa13.84□□□□□ -0.19
SNX2-213ENST00000514949 ONECUT1Q9UBC0 465 aa13.84□□□□□ -0.19
SNX2-213ENST00000514949 ODF3BA8MYP8 253 aa13.84□□□□□ -0.19
SNX2-213ENST00000514949 CNIH1O95406 144 aa13.84□□□□□ -0.19
SNX2-213ENST00000514949 IGLC3P0DOY3 106 aa13.84□□□□□ -0.19
SNX2-213ENST00000514949 GPR6P46095 362 aaPredicted RBP13.84□□□□□ -0.19
SNX2-213ENST00000514949 BPIFA4PQ86YQ2 179 aa13.84□□□□□ -0.19
SNX2-213ENST00000514949 ZNF491Q8N8L2 437 aa13.84□□□□□ -0.19
SNX2-213ENST00000514949 TMEM75Q8N9X5 138 aa13.84□□□□□ -0.19
SNX2-213ENST00000514949 OR2D3Q8NGH3 330 aa13.84□□□□□ -0.19
SNX2-213ENST00000514949 URB1-AS1Q96HZ7 61 aa13.84□□□□□ -0.19
SNX2-213ENST00000514949 ZNF48Q96MX3 618 aaPredicted RBP13.84□□□□□ -0.19
SNX2-213ENST00000514949 RAB1BQ9H0U4 201 aa13.84□□□□□ -0.19
SNX2-213ENST00000514949 UQCR10Q9UDW1 63 aa13.84□□□□□ -0.19
SNX2-213ENST00000514949 SPTBN2O15020 2390 aa13.83□□□□□ -0.19
SNX2-213ENST00000514949 OVOL3O00110 214 aa13.83□□□□□ -0.2
SNX2-213ENST00000514949 MRPS12O15235 138 aaKnown RBP13.83□□□□□ -0.2
SNX2-213ENST00000514949 APOHP02749 345 aaPredicted RBP13.83□□□□□ -0.2
SNX2-213ENST00000514949 RPLP1P05386 114 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms