RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 FLVCR2Q9UPI3 526 aa7.57□□□□□ -1.2
HMGXB3-205ENST00000514469 DNAH10Q8IVF4 4471 aa7.56□□□□□ -1.2
HMGXB3-205ENST00000514469 ELOA3CA0A087WX78 387 aaPredicted RBP7.56□□□□□ -1.2
HMGXB3-205ENST00000514469 CFDP00746 253 aaPredicted RBP7.56□□□□□ -1.2
HMGXB3-205ENST00000514469 IL7P13232 177 aa7.56□□□□□ -1.2
HMGXB3-205ENST00000514469 SPANXN5Q5MJ07 72 aa7.56□□□□□ -1.2
HMGXB3-205ENST00000514469 GDF5OSQ5U4N7 250 aa7.56□□□□□ -1.2
HMGXB3-205ENST00000514469 C2CD4CQ8TF44 421 aa7.56□□□□□ -1.2
HMGXB3-205ENST00000514469 SAV1Q9H4B6 383 aaPredicted RBP7.56□□□□□ -1.2
HMGXB3-205ENST00000514469 STRAPQ9Y3F4 350 aaKnown RBP7.56□□□□□ -1.2
HMGXB3-205ENST00000514469 DNAH6Q9C0G6 4158 aa7.56□□□□□ -1.2
HMGXB3-205ENST00000514469 HECTD4Q9Y4D8 3996 aa7.56□□□□□ -1.2
HMGXB3-205ENST00000514469 CENPXA8MT69 81 aa7.55□□□□□ -1.2
HMGXB3-205ENST00000514469 C11orf94C9JXX5 98 aa7.55□□□□□ -1.2
HMGXB3-205ENST00000514469 SSSCA1O60232 199 aa7.55□□□□□ -1.2
HMGXB3-205ENST00000514469 ANXA7P20073 488 aaKnown RBP7.55□□□□□ -1.2
HMGXB3-205ENST00000514469 ID1P41134 155 aa7.55□□□□□ -1.2
HMGXB3-205ENST00000514469 TCTAP57738 103 aa7.55□□□□□ -1.2
HMGXB3-205ENST00000514469 DEFB1P60022 68 aa7.55□□□□□ -1.2
HMGXB3-205ENST00000514469 POLR2GP62487 172 aaKnown RBP eCLIP7.55□□□□□ -1.2
HMGXB3-205ENST00000514469 AKR1C1Q04828 323 aa7.55□□□□□ -1.2
HMGXB3-205ENST00000514469 SAMD13Q5VXD3 122 aa7.55□□□□□ -1.2
HMGXB3-205ENST00000514469 FOXI2Q6ZQN5 318 aa7.55□□□□□ -1.2
HMGXB3-205ENST00000514469 BPIFCQ8NFQ6 507 aa7.55□□□□□ -1.2
HMGXB3-205ENST00000514469 PPP1R14BQ96C90 147 aa7.55□□□□□ -1.2
HMGXB3-205ENST00000514469 C17orf77Q96MU5 243 aa7.55□□□□□ -1.2
HMGXB3-205ENST00000514469 CLUHP3Q96NS8 147 aa7.55□□□□□ -1.2
HMGXB3-205ENST00000514469 SLC25A32Q9H2D1 315 aa7.55□□□□□ -1.2
HMGXB3-205ENST00000514469 XCL2Q9UBD3 114 aa7.55□□□□□ -1.2
HMGXB3-205ENST00000514469 LINC00854A0A1B0GVQ3 168 aa7.54□□□□□ -1.2
HMGXB3-205ENST00000514469 ZNF98A6NK75 572 aa7.54□□□□□ -1.2
HMGXB3-205ENST00000514469 PMS2P5A8MQ11 134 aa7.54□□□□□ -1.2
HMGXB3-205ENST00000514469 ISLRO14498 428 aa7.54□□□□□ -1.2
HMGXB3-205ENST00000514469 IFNA21P01568 189 aa7.54□□□□□ -1.2
HMGXB3-205ENST00000514469 GATA2P23769 480 aaPredicted RBP7.54□□□□□ -1.2
HMGXB3-205ENST00000514469 HLA-DMBP28068 263 aa7.54□□□□□ -1.2
HMGXB3-205ENST00000514469 MEOX2P50222 304 aa7.54□□□□□ -1.2
HMGXB3-205ENST00000514469 PAX9P55771 341 aa7.54□□□□□ -1.2
HMGXB3-205ENST00000514469 C4orf46Q504U0 113 aa7.54□□□□□ -1.2
HMGXB3-205ENST00000514469 SPATA31B1PQ5VZV4 182 aa7.54□□□□□ -1.2
HMGXB3-205ENST00000514469 ZNF705AQ6ZN79 300 aaPredicted RBP7.54□□□□□ -1.2
HMGXB3-205ENST00000514469 TMEM182Q6ZP80 229 aaPredicted RBP7.54□□□□□ -1.2
HMGXB3-205ENST00000514469 Q6ZTC4 211 aa7.54□□□□□ -1.2
HMGXB3-205ENST00000514469 TMEM144Q7Z5S9 345 aa7.54□□□□□ -1.2
HMGXB3-205ENST00000514469 OR8I2Q8N0Y5 310 aa7.54□□□□□ -1.2
HMGXB3-205ENST00000514469 RPP25LQ8N5L8 163 aaKnown RBP7.54□□□□□ -1.2
HMGXB3-205ENST00000514469 ZNF709Q8N972 641 aa7.54□□□□□ -1.2
HMGXB3-205ENST00000514469 SMIM8Q96KF7 97 aa7.54□□□□□ -1.2
HMGXB3-205ENST00000514469 LINC00052Q96N35 136 aa7.54□□□□□ -1.2
HMGXB3-205ENST00000514469 PSENENQ9NZ42 101 aa7.54□□□□□ -1.2
HMGXB3-205ENST00000514469 CELA1Q9UNI1 258 aa7.54□□□□□ -1.2
HMGXB3-205ENST00000514469 TRAV10A0A0B4J240 114 aa7.53□□□□□ -1.2
HMGXB3-205ENST00000514469 ZNF705FA8MVS1 300 aaPredicted RBP7.53□□□□□ -1.2
HMGXB3-205ENST00000514469 H3BRN7 92 aa7.53□□□□□ -1.2
HMGXB3-205ENST00000514469 DEDDO75618 318 aa7.53□□□□□ -1.2
HMGXB3-205ENST00000514469 ZNF705DP0CH99 300 aaPredicted RBP7.53□□□□□ -1.2
HMGXB3-205ENST00000514469 ZNF705BP0CI00 300 aaPredicted RBP7.53□□□□□ -1.2
HMGXB3-205ENST00000514469 ORM2P19652 201 aa7.53□□□□□ -1.2
HMGXB3-205ENST00000514469 GALR1P47211 349 aa7.53□□□□□ -1.2
HMGXB3-205ENST00000514469 IAH1Q2TAA2 248 aaPredicted RBP7.53□□□□□ -1.2
HMGXB3-205ENST00000514469 CNPY1Q3B7I2 92 aa7.53□□□□□ -1.2
HMGXB3-205ENST00000514469 TMEM14EPQ6UXP3 125 aa7.53□□□□□ -1.2
HMGXB3-205ENST00000514469 GSG1LQ6UXU4 331 aa7.53□□□□□ -1.2
HMGXB3-205ENST00000514469 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.53□□□□□ -1.2
HMGXB3-205ENST00000514469 MITD1Q8WV92 249 aa7.53□□□□□ -1.2
HMGXB3-205ENST00000514469 C20orf173Q96LM9 149 aa7.53□□□□□ -1.2
HMGXB3-205ENST00000514469 GPR82Q96P67 336 aa7.53□□□□□ -1.2
HMGXB3-205ENST00000514469 NEU1Q99519 415 aa7.53□□□□□ -1.2
HMGXB3-205ENST00000514469 TMEM147Q9BVK8 224 aa7.53□□□□□ -1.2
HMGXB3-205ENST00000514469 C20orf85Q9H1P6 137 aa7.53□□□□□ -1.2
HMGXB3-205ENST00000514469 SLC25A22Q9H936 323 aa7.53□□□□□ -1.2
HMGXB3-205ENST00000514469 APLNQ9ULZ1 77 aa7.53□□□□□ -1.2
HMGXB3-205ENST00000514469 RCL1Q9Y2P8 373 aaKnown RBP7.53□□□□□ -1.2
HMGXB3-205ENST00000514469 A0A0J9YX75 114 aa7.52□□□□□ -1.21
HMGXB3-205ENST00000514469 SMCO3A2RU48 225 aa7.52□□□□□ -1.21
HMGXB3-205ENST00000514469 A8MTW9 85 aa7.52□□□□□ -1.21
HMGXB3-205ENST00000514469 FNDC10F2Z333 226 aa7.52□□□□□ -1.21
HMGXB3-205ENST00000514469 PLA2G10O15496 165 aa7.52□□□□□ -1.21
HMGXB3-205ENST00000514469 CCNKO75909 580 aa7.52□□□□□ -1.21
HMGXB3-205ENST00000514469 IGKV3-20P01619 116 aa7.52□□□□□ -1.21
HMGXB3-205ENST00000514469 S100A7P31151 101 aa7.52□□□□□ -1.21
HMGXB3-205ENST00000514469 TAS2R30P59541 319 aa7.52□□□□□ -1.21
HMGXB3-205ENST00000514469 DLK1P80370 383 aa7.52□□□□□ -1.21
HMGXB3-205ENST00000514469 CYP2G1PQ6ZSU1 146 aa7.52□□□□□ -1.21
HMGXB3-205ENST00000514469 ZBTB8BQ8NAP8 495 aaPredicted RBP7.52□□□□□ -1.21
HMGXB3-205ENST00000514469 OR1B1Q8NGR6 318 aa7.52□□□□□ -1.21
HMGXB3-205ENST00000514469 C16orf92Q96LL3 132 aa7.52□□□□□ -1.21
HMGXB3-205ENST00000514469 RPRMQ9NS64 109 aa7.52□□□□□ -1.21
HMGXB3-205ENST00000514469 NDUFA13Q9P0J0 144 aa7.52□□□□□ -1.21
HMGXB3-205ENST00000514469 IGLL5B9A064 214 aa7.51□□□□□ -1.21
HMGXB3-205ENST00000514469 F6UB75 175 aa7.51□□□□□ -1.21
HMGXB3-205ENST00000514469 K7EPK0 472 aa7.51□□□□□ -1.21
HMGXB3-205ENST00000514469 LYRM1O43325 122 aa7.51□□□□□ -1.21
HMGXB3-205ENST00000514469 TSC22D2O75157 780 aa7.51□□□□□ -1.21
HMGXB3-205ENST00000514469 SCGB1D2O95969 90 aa7.51□□□□□ -1.21
HMGXB3-205ENST00000514469 IL5P05113 134 aa7.51□□□□□ -1.21
HMGXB3-205ENST00000514469 FXYD7P58549 80 aa7.51□□□□□ -1.21
HMGXB3-205ENST00000514469 PLP1P60201 277 aa7.51□□□□□ -1.21
HMGXB3-205ENST00000514469 SELENOTP62341 195 aa7.51□□□□□ -1.21
HMGXB3-205ENST00000514469 PSG9Q00887 426 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms