RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 OR5H2Q8NGV7 314 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 OR4K13Q8NH42 304 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 SGMS2Q8NHU3 365 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 CNIH3Q8TBE1 160 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 AQP3Q92482 292 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 FGF11Q92914 225 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 DPH3Q96FX2 82 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 C4orf45Q96LM5 186 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 UBE2E2Q96LR5 201 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 TMEM147Q9BVK8 224 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 C19orf24Q9BVV8 132 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 SCRT1Q9BWW7 348 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 NMES1Q9C002 83 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 CXXC4Q9H2H0 198 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 GLIPR2Q9H4G4 154 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 IKZF5Q9H5V7 419 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF665Q9H7R5 613 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 PDFQ9HBH1 243 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 TVP23BQ9NYZ1 205 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 MTFP1Q9UDX5 166 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 LSM2Q9Y333 95 aaKnown RBP1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 NEUROG3Q9Y4Z2 214 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 SELENOKQ9Y6D0 94 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 KCNE3Q9Y6H6 103 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 SLX4Q8IY92 1834 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 PATJQ8NI35 1801 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 COL14A1Q05707 1796 aaKnown RBP1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 BAZ2AQ9UIF9 1905 aaKnown RBP1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 DUOX1Q9NRD9 1551 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 BTAF1O14981 1849 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRBV20-1A0A075B6N2 111 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 hCG_1818297A0A087WSY0 165 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRAV14DV4A0A0A6YYC5 116 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRAV8-2A0A0B4J237 113 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRAV8-4A0A0B4J246 113 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRAV1-1A0A0B4J248 108 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 MUC21A0A0G2JKD1 596 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 LOC107984640A0A0U1RRK4 108 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 MUC21A0A140T8X8 626 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 LOC107986453A0A1B0GWG9 222 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 DPRXA6NFQ7 191 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 FAM24AA6NFZ4 105 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 NCBP2LA6PVI3 153 aaKnown RBP1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 SRRM4A7MD48 611 aaKnown RBP1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 A8MT66 165 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 SNURFLB1AK76 121 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 H0Y9J4 135 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 SYS1-DBNDD2H3BUS1 97 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 H7C1H1 209 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 K7EQD1 137 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 K7EQS6 105 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 K7N7A8 449 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 UPK2O00526 184 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 NDUFS5O43920 106 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 EFNA2O43921 213 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF737O75373 536 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 CST7O76096 145 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 LY6G6DO95868 133 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 P01737 135 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRACP01848 142 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 MT-ATP8P03928 68 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF688P0C7X2 276 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 FGF6P10767 208 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 COX7CP15954 63 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 ELK1P19419 428 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 IL3RAP26951 378 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 CXCL5P42830 114 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 P2RX1P51575 399 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 SLC25A1P53007 311 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 SUB1P53999 127 aaKnown RBP eCLIP1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 APOC4P55056 127 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 FOXA3P55318 350 aaPredicted RBP1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 RPS11P62280 158 aaKnown RBP eCLIP1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF85Q03923 595 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 FOXF1Q12946 379 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 LAGE3Q14657 143 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 RTL8BQ17RB0 113 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 MPV17L2Q567V2 206 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 MS4A13Q5J8X5 152 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 MUC21Q5SSG8 566 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 FKBP1CQ5VVH2 108 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 C22orf39Q6P5X5 142 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 HRCT1Q6UXD1 115 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 Q6ZRG5 221 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 DNM1P46Q6ZS02 220 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 TMEM179BQ7Z7N9 219 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRAPPC6BQ86SZ2 158 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 TEN1Q86WV5 123 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 DRAM1Q8N682 238 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 ANKRD29Q8N6D5 301 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 GVQW1Q8N7I0 195 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 Q8N976 141 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 OR10G2Q8NGC3 310 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 OR2A1Q8NGT9 310 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 MRPL30Q8TCC3 161 aaKnown RBP1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 SRSF12Q8WXF0 261 aaKnown RBP1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 EEF1AKMT3Q96AZ1 226 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 BORCS8Q96FH0 119 aa1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 SLC25A44Q96H78 314 aaPredicted RBP1.48□□□□□ -2.17
HMGB3P17-201ENST00000504195 C2orf50Q96LR7 162 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms