RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 ARFGEF1Q9Y6D6 1849 aa5.09□□□□□ -1.6
CLCN3-204ENST00000504131 TRBV19A0A075B6N1 114 aa5.09□□□□□ -1.6
CLCN3-204ENST00000504131 A0A0B4J2C4 111 aa5.09□□□□□ -1.6
CLCN3-204ENST00000504131 TMEM30CPA0ZSE6 113 aa5.09□□□□□ -1.6
CLCN3-204ENST00000504131 C12orf77C9JDV5 145 aa5.09□□□□□ -1.6
CLCN3-204ENST00000504131 NDUFA3O95167 84 aa5.09□□□□□ -1.6
CLCN3-204ENST00000504131 ATP5EP56381 51 aaPredicted RBP5.09□□□□□ -1.6
CLCN3-204ENST00000504131 DEFB103AP81534 67 aa5.09□□□□□ -1.6
CLCN3-204ENST00000504131 FAM90A1Q86YD7 464 aa5.09□□□□□ -1.6
CLCN3-204ENST00000504131 LIME1Q9H400 295 aa5.09□□□□□ -1.6
CLCN3-204ENST00000504131 SCN4AP35499 1836 aa5.09□□□□□ -1.6
CLCN3-204ENST00000504131 TRIP11Q15643 1979 aa5.08□□□□□ -1.6
CLCN3-204ENST00000504131 HOXD3P31249 432 aaPredicted RBP5.08□□□□□ -1.6
CLCN3-204ENST00000504131 PMS2CLQ68D20 193 aa5.08□□□□□ -1.6
CLCN3-204ENST00000504131 ALKAL1Q6UXT8 129 aa5.08□□□□□ -1.6
CLCN3-204ENST00000504131 OR10AC1Q8NH08 325 aa5.08□□□□□ -1.6
CLCN3-204ENST00000504131 COL11A2P13942 1736 aaPredicted RBP5.08□□□□□ -1.6
CLCN3-204ENST00000504131 TRIP6Q15654 476 aaKnown RBP5.08□□□□□ -1.6
CLCN3-204ENST00000504131 WDR38Q5JTN6 314 aa5.08□□□□□ -1.6
CLCN3-204ENST00000504131 MSRB3Q8IXL7 192 aa5.08□□□□□ -1.6
CLCN3-204ENST00000504131 FBXL14Q8N1E6 418 aa5.08□□□□□ -1.6
CLCN3-204ENST00000504131 ZNF721Q8TF20 911 aa5.08□□□□□ -1.6
CLCN3-204ENST00000504131 YPEL4Q96NS1 127 aa5.08□□□□□ -1.6
CLCN3-204ENST00000504131 TMEM167BQ9NRX6 74 aa5.08□□□□□ -1.6
CLCN3-204ENST00000504131 TRAV1-1A0A0B4J248 108 aa5.08□□□□□ -1.6
CLCN3-204ENST00000504131 MYMXA0A1B0GTQ4 84 aa5.08□□□□□ -1.6
CLCN3-204ENST00000504131 STATHP02808 62 aa5.08□□□□□ -1.6
CLCN3-204ENST00000504131 CTRLP40313 264 aa5.08□□□□□ -1.6
CLCN3-204ENST00000504131 C1orf140Q5VVS0 124 aa5.08□□□□□ -1.6
CLCN3-204ENST00000504131 WFDC3Q8IUB2 231 aa5.08□□□□□ -1.6
CLCN3-204ENST00000504131 TMEM252Q8N6L7 170 aa5.08□□□□□ -1.6
CLCN3-204ENST00000504131 SERP2Q8N6R1 65 aa5.08□□□□□ -1.6
CLCN3-204ENST00000504131 LINC00312Q9Y6C7 94 aa5.08□□□□□ -1.6
CLCN3-204ENST00000504131 LGALS9BQ3B8N2 356 aa5.08□□□□□ -1.6
CLCN3-204ENST00000504131 Q6ZVL8 140 aa5.08□□□□□ -1.6
CLCN3-204ENST00000504131 C20orf197Q8N268 126 aa5.08□□□□□ -1.6
CLCN3-204ENST00000504131 SLC25A15Q9Y619 301 aa5.08□□□□□ -1.6
CLCN3-204ENST00000504131 FSTP19883 344 aa5.07□□□□□ -1.6
CLCN3-204ENST00000504131 ZNF141Q15928 474 aa5.07□□□□□ -1.6
CLCN3-204ENST00000504131 BEAN1Q3B7T3 259 aa5.07□□□□□ -1.6
CLCN3-204ENST00000504131 CARD19Q96LW7 228 aa5.07□□□□□ -1.6
CLCN3-204ENST00000504131 IFI27P40305 119 aaPredicted RBP5.07□□□□□ -1.6
CLCN3-204ENST00000504131 YPEL3P61236 119 aaPredicted RBP5.07□□□□□ -1.6
CLCN3-204ENST00000504131 LYZL2Q7Z4W2 148 aa5.07□□□□□ -1.6
CLCN3-204ENST00000504131 PIANPQ8IYJ0 282 aa5.07□□□□□ -1.6
CLCN3-204ENST00000504131 SMIM14Q96QK8 99 aa5.07□□□□□ -1.6
CLCN3-204ENST00000504131 SCRT1Q9BWW7 348 aa5.07□□□□□ -1.6
CLCN3-204ENST00000504131 A0A0D9SEW6 157 aa5.07□□□□□ -1.6
CLCN3-204ENST00000504131 MPV17P39210 176 aa5.07□□□□□ -1.6
CLCN3-204ENST00000504131 LIM2P55344 173 aa5.07□□□□□ -1.6
CLCN3-204ENST00000504131 LYPD6Q86Y78 171 aa5.07□□□□□ -1.6
CLCN3-204ENST00000504131 MDFICQ9P1T7 246 aa5.07□□□□□ -1.6
CLCN3-204ENST00000504131 CACNA1SQ13698 1873 aa5.07□□□□□ -1.6
CLCN3-204ENST00000504131 LMO7DNF2Z398 122 aa5.07□□□□□ -1.6
CLCN3-204ENST00000504131 WNT9BO14905 357 aa5.07□□□□□ -1.6
CLCN3-204ENST00000504131 RNASE1P07998 156 aaKnown RBP5.07□□□□□ -1.6
CLCN3-204ENST00000504131 ZIC1Q15915 447 aa5.07□□□□□ -1.6
CLCN3-204ENST00000504131 ARID1BQ8NFD5 2236 aaPredicted RBP5.07□□□□□ -1.6
CLCN3-204ENST00000504131 IGHV1OR21-1A0A087WYE8 117 aa5.07□□□□□ -1.6
CLCN3-204ENST00000504131 A0A1W2PR77 199 aa5.07□□□□□ -1.6
CLCN3-204ENST00000504131 F2Z2F3 143 aa5.07□□□□□ -1.6
CLCN3-204ENST00000504131 H0YIZ8 118 aa5.07□□□□□ -1.6
CLCN3-204ENST00000504131 MRPS36P82909 103 aaKnown RBP5.07□□□□□ -1.6
CLCN3-204ENST00000504131 LINC00643Q86TS7 51 aa5.07□□□□□ -1.6
CLCN3-204ENST00000504131 ZNF645Q8N7E2 425 aa5.07□□□□□ -1.6
CLCN3-204ENST00000504131 SLC25A29Q8N8R3 303 aa5.07□□□□□ -1.6
CLCN3-204ENST00000504131 ZFC3H1O60293 1989 aaKnown RBP5.07□□□□□ -1.6
CLCN3-204ENST00000504131 FAM53BQ14153 422 aa5.06□□□□□ -1.6
CLCN3-204ENST00000504131 IGKV6D-21A0A0A0MT36 114 aa5.06□□□□□ -1.6
CLCN3-204ENST00000504131 HBDP02042 147 aa5.06□□□□□ -1.6
CLCN3-204ENST00000504131 LYZL4Q96KX0 146 aa5.06□□□□□ -1.6
CLCN3-204ENST00000504131 MPC1Q9Y5U8 109 aa5.06□□□□□ -1.6
CLCN3-204ENST00000504131 LOXHD1Q8IVV2 1947 aa5.06□□□□□ -1.6
CLCN3-204ENST00000504131 FAM90A26D6RGX4 464 aa5.06□□□□□ -1.6
CLCN3-204ENST00000504131 M0QZQ0 153 aa5.06□□□□□ -1.6
CLCN3-204ENST00000504131 PEX7O00628 323 aa5.06□□□□□ -1.6
CLCN3-204ENST00000504131 TRIAP1O43715 76 aa5.06□□□□□ -1.6
CLCN3-204ENST00000504131 MP68P56378 58 aa5.06□□□□□ -1.6
CLCN3-204ENST00000504131 RPS11P62280 158 aaKnown RBP eCLIP5.06□□□□□ -1.6
CLCN3-204ENST00000504131 IFI27L1Q96BM0 104 aa5.06□□□□□ -1.6
CLCN3-204ENST00000504131 DLL3Q9NYJ7 618 aa5.06□□□□□ -1.6
CLCN3-204ENST00000504131 FAM78AQ5JUQ0 283 aa5.06□□□□□ -1.6
CLCN3-204ENST00000504131 Q6ZS49 121 aa5.06□□□□□ -1.6
CLCN3-204ENST00000504131 PRSS27Q9BQR3 290 aa5.06□□□□□ -1.6
CLCN3-204ENST00000504131 D6R8Y8 96 aa5.05□□□□□ -1.6
CLCN3-204ENST00000504131 FXYD2P54710 66 aa5.05□□□□□ -1.6
CLCN3-204ENST00000504131 MUSTN1Q8IVN3 82 aa5.05□□□□□ -1.6
CLCN3-204ENST00000504131 RPRMLQ8N4K4 120 aa5.05□□□□□ -1.6
CLCN3-204ENST00000504131 NKAPP1Q8N9T2 125 aa5.05□□□□□ -1.6
CLCN3-204ENST00000504131 ATAD5Q96QE3 1844 aa5.05□□□□□ -1.6
CLCN3-204ENST00000504131 IGKV6-21A0A0C4DH24 114 aa5.05□□□□□ -1.6
CLCN3-204ENST00000504131 ZIC3O60481 467 aa5.05□□□□□ -1.6
CLCN3-204ENST00000504131 MGPP08493 103 aa5.05□□□□□ -1.6
CLCN3-204ENST00000504131 PEBP1P30086 187 aaKnown RBP5.05□□□□□ -1.6
CLCN3-204ENST00000504131 ZNF818PQ6ZRF7 136 aa5.05□□□□□ -1.6
CLCN3-204ENST00000504131 NFAM1Q8NET5 270 aaPredicted RBP5.05□□□□□ -1.6
CLCN3-204ENST00000504131 TRBV6-7A0A0A0MS04 114 aa5.05□□□□□ -1.6
CLCN3-204ENST00000504131 LY6G5CQ5SRR4 150 aa5.05□□□□□ -1.6
CLCN3-204ENST00000504131 STPG1Q5TH74 334 aa5.05□□□□□ -1.6
CLCN3-204ENST00000504131 SOSTDC1Q6X4U4 206 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms