RNA–Protein interactions for RNA: ENST00000493662.6

MSH5-SAPCD1-207, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene MSH5-SAPCD1, Length 3,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-207ENST00000493662 A0A1B0GWB2 263 aa8.82□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 SAA2P0DJI9 122 aaPredicted RBP8.82□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 ADIPOQQ15848 244 aa8.82□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 FAM71F2Q6NXP2 309 aa8.82□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 C1orf162Q8NEQ5 155 aaPredicted RBP8.82□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 RPL15P61313 204 aaKnown RBP8.82□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 SLC35E4Q6ICL7 350 aa8.82□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 SRRM5B3KS81 715 aa8.81□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 NDUFS7O75251 213 aa8.81□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 ZNF146Q15072 292 aa8.81□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 AP5S1Q9NUS5 200 aa8.81□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 IZUMO1RA6ND01 250 aa8.81□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 K7ENP7 123 aa8.81□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 RNASE6Q93091 150 aaKnown RBP8.81□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 LOC105371242A0A075B767 164 aa8.81□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 PPIAL4CA0A0B4J2A2 164 aa8.81□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 IGLC7A0M8Q6 106 aa8.81□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 PPIAL4GP0DN37 164 aa8.81□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 MORN2Q502X0 79 aa8.81□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 PRR31Q5SQ13 230 aa8.81□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 UTF1Q5T230 341 aa8.81□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 STPG3Q8N7X2 389 aa8.81□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 RAB1CQ92928 201 aa8.81□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 MCRIP2Q9BUT9 160 aaKnown RBP8.81□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 MRPL20Q9BYC9 149 aaKnown RBP8.81□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 H3BVH4 76 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 OR9G9P0C7N8 305 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 STAG3L3P0CL85 134 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 PAX9P55771 341 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 TMEM116Q8NCL8 245 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 ZBTB34Q8NCN2 500 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 SSC4DQ8WTU2 575 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 AZU1P20160 251 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 MLANAQ16655 118 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 PDPNQ86YL7 162 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 ZNF114Q8NC26 417 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 TCF19Q9Y242 345 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 TACC2O95359 2948 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 LOC107984156A0A0G2JMH3 177 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 GNLYP22749 145 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 HSD52Q0P140 79 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 ARL17AQ8IVW1 177 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 OR1L4Q8NGR5 311 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 VSTM2AQ8TAG5 236 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 DPF1Q92782 380 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 OSTCQ9NRP0 149 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 IDI2-AS1Q9NZ38 188 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 AMMECR1Q9Y4X0 333 aaPredicted RBP8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 IGHV3OR16-13A0A075B7E8 117 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 IGHV3-74A0A0B4J1X5 117 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 IGKV1D-33P01593 117 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 IGKV1-33P01594 117 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 IGKV1-16P04430 117 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 COL8A2P25067 703 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 RAB9AP51151 201 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 UCNP55089 124 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 RPL11P62913 178 aaKnown RBP8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 HBBP68871 147 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 HAPLN4Q86UW8 402 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 C5orf17Q8NAS9 161 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 ATP6V0BQ99437 205 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 HES4Q9HCC6 221 aa8.8□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 KBTBD11-OT1A0A1B0GTJ5 212 aa8.79□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 RIGQ13278 110 aa8.79□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 E7EQL1 145 aa8.79□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 NDUFB8O95169 186 aa8.79□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 APOBEC3AP31941 199 aaPredicted RBP8.79□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 CX3CL1P78423 397 aa8.79□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 SAMD5Q5TGI4 173 aa8.79□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 ASCL4Q6XD76 172 aa8.79□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 HIGD1CA8MV81 97 aa8.79□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 TOMM40O96008 361 aa8.79□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 IGHV3-23P01764 117 aa8.79□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 STAG3L2P0CL84 134 aa8.79□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 SUB1P53999 127 aaKnown RBP eCLIP8.79□□□□□ -12e-7■■□□□ 14.2
MSH5-SAPCD1-207ENST00000493662 VMA21Q3ZAQ7 101 aa8.79□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 A0A1W2PRE2 83 aa8.78□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 ZNF134P52741 427 aa8.78□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 DIAPH2-AS1Q14236 149 aa8.78□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 ZNF585BQ52M93 769 aa8.78□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 RCHY1Q96PM5 261 aa8.78□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 MOSP00540 346 aa8.78□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 KLRD1Q13241 179 aa8.78□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 BVES-AS1Q5T3Y7 98 aa8.78□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 C11orf53Q8IXP5 236 aa8.78□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 TMUB1Q9BVT8 246 aa8.78□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 FBXL15Q9H469 300 aa8.78□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 MSRB2Q9Y3D2 182 aa8.78□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 TSSC4Q9Y5U2 329 aaPredicted RBP8.78□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 IGKV1-39P01597 117 aa8.78□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 IGKV1D-39P04432 117 aa8.78□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 KIR3DS1Q14943 382 aa8.78□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 TMEM177Q53S58 311 aa8.78□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 TTC32Q5I0X7 151 aa8.78□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 ZNF48Q96MX3 618 aaPredicted RBP8.78□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 NABP2Q9BQ15 211 aa8.78□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 ANAPC13Q9BS18 74 aa8.78□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 MS4A6AQ9H2W1 248 aa8.78□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 CHODLQ9H9P2 273 aa8.78□□□□□ -1
MSH5-SAPCD1-207ENST00000493662 NHP2Q9NX24 153 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms