RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, human

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSX2IP-208	ENST00000490476	ATP6V1G2	O95670	118 aa		2.57	□□□□□ -2
SSX2IP-208	ENST00000490476	IGKV1D-33	P01593	117 aa		2.57	□□□□□ -2
SSX2IP-208	ENST00000490476	IGKV1-33	P01594	117 aa		2.57	□□□□□ -2
SSX2IP-208	ENST00000490476	C1QB	P02746	253 aa		2.57	□□□□□ -2
SSX2IP-208	ENST00000490476	TPM3	P06753	285 aa		2.57	□□□□□ -2
SSX2IP-208	ENST00000490476	CD34	P28906	385 aa		2.57	□□□□□ -2
SSX2IP-208	ENST00000490476	PPP1R2	P41236	205 aa		2.57	□□□□□ -2
SSX2IP-208	ENST00000490476	CDK5R1	Q15078	307 aa		2.57	□□□□□ -2
SSX2IP-208	ENST00000490476	SLC36A2	Q495M3	483 aa		2.57	□□□□□ -2
SSX2IP-208	ENST00000490476	FAM162B	Q5T6X4	162 aa		2.57	□□□□□ -2
SSX2IP-208	ENST00000490476	TEX36	Q5VZQ5	186 aa		2.57	□□□□□ -2
SSX2IP-208	ENST00000490476	ZNF660	Q6AZW8	331 aa	Predicted RBP	2.57	□□□□□ -2
SSX2IP-208	ENST00000490476		Q6ZSA8	131 aa		2.57	□□□□□ -2
SSX2IP-208	ENST00000490476	C20orf196	Q8IYI0	205 aa		2.57	□□□□□ -2
SSX2IP-208	ENST00000490476	C10orf111	Q8N326	155 aa		2.57	□□□□□ -2
SSX2IP-208	ENST00000490476	MMGT1	Q8N4V1	131 aa		2.57	□□□□□ -2
SSX2IP-208	ENST00000490476	OR4A5	Q8NH83	315 aa		2.57	□□□□□ -2
SSX2IP-208	ENST00000490476	ZNF563	Q8TA94	476 aa		2.57	□□□□□ -2
SSX2IP-208	ENST00000490476	CMBL	Q96DG6	245 aa		2.57	□□□□□ -2
SSX2IP-208	ENST00000490476	REEP6	Q96HR9	211 aa		2.57	□□□□□ -2
SSX2IP-208	ENST00000490476	ZNF586	Q9NXT0	402 aa		2.57	□□□□□ -2
SSX2IP-208	ENST00000490476		A0A087WTM6	91 aa		2.56	□□□□□ -2
SSX2IP-208	ENST00000490476	TMED7-TICAM2	A0A0A6YYA0	188 aa		2.56	□□□□□ -2
SSX2IP-208	ENST00000490476	SPRR5	A0A1B0GTR4	108 aa		2.56	□□□□□ -2
SSX2IP-208	ENST00000490476	KLHL2	O95198	593 aa		2.56	□□□□□ -2
SSX2IP-208	ENST00000490476	SULT1A2	P50226	295 aa		2.56	□□□□□ -2
SSX2IP-208	ENST00000490476	DLX6	P56179	175 aa		2.56	□□□□□ -2
SSX2IP-208	ENST00000490476	MP68	P56378	58 aa		2.56	□□□□□ -2
SSX2IP-208	ENST00000490476	UBE2G2	P60604	165 aa		2.56	□□□□□ -2
SSX2IP-208	ENST00000490476	TPM4	P67936	248 aa		2.56	□□□□□ -2
SSX2IP-208	ENST00000490476	SKP2	Q13309	424 aa		2.56	□□□□□ -2
SSX2IP-208	ENST00000490476	PDZD11	Q5EBL8	140 aa		2.56	□□□□□ -2
SSX2IP-208	ENST00000490476	PABPC1L2A	Q5JQF8	200 aa		2.56	□□□□□ -2
SSX2IP-208	ENST00000490476	TTC33	Q6PID6	262 aa	Predicted RBP	2.56	□□□□□ -2
SSX2IP-208	ENST00000490476	TCF23	Q7RTU1	214 aa		2.56	□□□□□ -2
SSX2IP-208	ENST00000490476	SCX	Q7RTU7	201 aa		2.56	□□□□□ -2
SSX2IP-208	ENST00000490476	SPATA24	Q86W54	205 aa		2.56	□□□□□ -2
SSX2IP-208	ENST00000490476	FUNDC1	Q8IVP5	155 aa		2.56	□□□□□ -2
SSX2IP-208	ENST00000490476	OR11H6	Q8NGC7	330 aa		2.56	□□□□□ -2
SSX2IP-208	ENST00000490476	OR9Q1	Q8NGQ5	310 aa		2.56	□□□□□ -2
SSX2IP-208	ENST00000490476	OR13D1	Q8NGV5	346 aa		2.56	□□□□□ -2
SSX2IP-208	ENST00000490476	LCE3D	Q9BYE3	92 aa		2.56	□□□□□ -2
SSX2IP-208	ENST00000490476	FABP12	A6NFH5	140 aa		2.55	□□□□□ -2
SSX2IP-208	ENST00000490476	CLDN24	A6NM45	220 aa		2.55	□□□□□ -2
SSX2IP-208	ENST00000490476		A8MWP4	228 aa		2.55	□□□□□ -2
SSX2IP-208	ENST00000490476		H3BQ85	93 aa		2.55	□□□□□ -2
SSX2IP-208	ENST00000490476	ADAP1	O75689	374 aa		2.55	□□□□□ -2
SSX2IP-208	ENST00000490476	RNASE2	P10153	161 aa	Known RBP	2.55	□□□□□ -2
SSX2IP-208	ENST00000490476	NEFH	P12036	1026 aa		2.55	□□□□□ -2
SSX2IP-208	ENST00000490476	PSMB6	P28072	239 aa		2.55	□□□□□ -2
SSX2IP-208	ENST00000490476	CRABP2	P29373	138 aa		2.55	□□□□□ -2
SSX2IP-208	ENST00000490476	CD40LG	P29965	261 aa		2.55	□□□□□ -2
SSX2IP-208	ENST00000490476	GRPR	P30550	384 aa		2.55	□□□□□ -2
SSX2IP-208	ENST00000490476	CD200	P41217	278 aa		2.55	□□□□□ -2
SSX2IP-208	ENST00000490476	CAV3	P56539	151 aa		2.55	□□□□□ -2
SSX2IP-208	ENST00000490476	C1D	Q13901	141 aa	Known RBP	2.55	□□□□□ -2
SSX2IP-208	ENST00000490476	LGALSL	Q3ZCW2	172 aa	Predicted RBP	2.55	□□□□□ -2
SSX2IP-208	ENST00000490476	LCE3A	Q5TA76	89 aa		2.55	□□□□□ -2
SSX2IP-208	ENST00000490476	CLDN22	Q8N7P3	220 aa		2.55	□□□□□ -2
SSX2IP-208	ENST00000490476		Q8NAQ8	132 aa		2.55	□□□□□ -2
SSX2IP-208	ENST00000490476	OR4P4	Q8NGL7	312 aa		2.55	□□□□□ -2
SSX2IP-208	ENST00000490476	KCTD7	Q96MP8	289 aa		2.55	□□□□□ -2
SSX2IP-208	ENST00000490476	LINC01600	Q96MT4	127 aa		2.55	□□□□□ -2
SSX2IP-208	ENST00000490476	DCUN1D5	Q9BTE7	237 aa		2.55	□□□□□ -2
SSX2IP-208	ENST00000490476	USE1	Q9NZ43	259 aa		2.55	□□□□□ -2
SSX2IP-208	ENST00000490476	ZNF230	Q9UIE0	474 aa	Predicted RBP	2.55	□□□□□ -2
SSX2IP-208	ENST00000490476	HHLA2	Q9UM44	414 aa		2.55	□□□□□ -2
SSX2IP-208	ENST00000490476	OR5H14	A6NHG9	310 aa		2.54	□□□□□ -2
SSX2IP-208	ENST00000490476	PROSC	O94903	275 aa		2.54	□□□□□ -2
SSX2IP-208	ENST00000490476	OCM	P0CE72	109 aa	Predicted RBP	2.54	□□□□□ -2
SSX2IP-208	ENST00000490476	CCL3L1	P16619	93 aa		2.54	□□□□□ -2
SSX2IP-208	ENST00000490476	KRTAP10-8	P60410	259 aa		2.54	□□□□□ -2
SSX2IP-208	ENST00000490476	C12orf74	Q32Q52	190 aa		2.54	□□□□□ -2
SSX2IP-208	ENST00000490476	OR2T2	Q6IF00	324 aa		2.54	□□□□□ -2
SSX2IP-208	ENST00000490476	SMARCD3	Q6STE5	483 aa		2.54	□□□□□ -2
SSX2IP-208	ENST00000490476	ADM2	Q7Z4H4	148 aa		2.54	□□□□□ -2
SSX2IP-208	ENST00000490476	DTD1	Q8TEA8	209 aa		2.54	□□□□□ -2
SSX2IP-208	ENST00000490476	DUSP21	Q9H596	190 aa		2.54	□□□□□ -2
SSX2IP-208	ENST00000490476	KCNIP2	Q9NS61	270 aa		2.54	□□□□□ -2
SSX2IP-208	ENST00000490476	C19orf12	Q9NSK7	152 aa		2.54	□□□□□ -2
SSX2IP-208	ENST00000490476	NAGK	Q9UJ70	344 aa		2.54	□□□□□ -2
SSX2IP-208	ENST00000490476	NDUFAF1	Q9Y375	327 aa		2.54	□□□□□ -2
SSX2IP-208	ENST00000490476	MDN1	Q9NU22	5596 aa		2.53	□□□□□ -2
SSX2IP-208	ENST00000490476	TMEM213	A2RRL7	107 aa		2.53	□□□□□ -2
SSX2IP-208	ENST00000490476	GGT3P	A6NGU5	568 aa		2.53	□□□□□ -2
SSX2IP-208	ENST00000490476		F5H5K5	113 aa		2.53	□□□□□ -2
SSX2IP-208	ENST00000490476	HLA-A	P01891	365 aa	Known RBP	2.53	□□□□□ -2
SSX2IP-208	ENST00000490476	SCT	P09683	121 aa		2.53	□□□□□ -2
SSX2IP-208	ENST00000490476	CGB3	P0DN86	165 aa		2.53	□□□□□ -2
SSX2IP-208	ENST00000490476	CGB7	P0DN87	165 aa		2.53	□□□□□ -2
SSX2IP-208	ENST00000490476	POLR2H	P52434	150 aa	Known RBP	2.53	□□□□□ -2
SSX2IP-208	ENST00000490476	ZNF826P	Q6ZT77	177 aa		2.53	□□□□□ -2
SSX2IP-208	ENST00000490476	FER1L6-AS1	Q8NA97	138 aa		2.53	□□□□□ -2
SSX2IP-208	ENST00000490476	LFNG	Q8NES3	379 aa		2.53	□□□□□ -2
SSX2IP-208	ENST00000490476	OR5D18	Q8NGL1	313 aa		2.53	□□□□□ -2
SSX2IP-208	ENST00000490476	DYNLRB2	Q8TF09	96 aa		2.53	□□□□□ -2
SSX2IP-208	ENST00000490476	SLC7A6	Q92536	515 aa		2.53	□□□□□ -2
SSX2IP-208	ENST00000490476	GPR22	Q99680	433 aa		2.53	□□□□□ -2
SSX2IP-208	ENST00000490476	WFDC6	Q9BQY6	131 aa		2.53	□□□□□ -2
SSX2IP-208	ENST00000490476	TAS2R1	Q9NYW7	299 aa		2.53	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms