RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 TEX13DA0A0J9YY54 714 aaPredicted RBP9.74□□□□□ -0.85
VARS-227ENST00000489979 SSX7Q7RTT5 188 aa9.74□□□□□ -0.85
VARS-227ENST00000489979 OR52I2Q8NH67 350 aa9.74□□□□□ -0.85
VARS-227ENST00000489979 RNF141Q8WVD5 230 aa9.74□□□□□ -0.85
VARS-227ENST00000489979 YIPF6Q96EC8 236 aa9.74□□□□□ -0.85
VARS-227ENST00000489979 NAA60Q9H7X0 242 aa9.74□□□□□ -0.85
VARS-227ENST00000489979 Q9H8V8 135 aa9.74□□□□□ -0.85
VARS-227ENST00000489979 PLAC8L1A1L4L8 177 aa9.73□□□□□ -0.85
VARS-227ENST00000489979 EPM2AB3EWF7 344 aa9.73□□□□□ -0.85
VARS-227ENST00000489979 M0R2Z0 102 aa9.73□□□□□ -0.85
VARS-227ENST00000489979 CRXO43186 299 aaPredicted RBP9.73□□□□□ -0.85
VARS-227ENST00000489979 INSP01308 110 aa9.73□□□□□ -0.85
VARS-227ENST00000489979 ATP5G1P05496 136 aa9.73□□□□□ -0.85
VARS-227ENST00000489979 TBPP20226 339 aa9.73□□□□□ -0.85
VARS-227ENST00000489979 ATP5G3P48201 142 aa9.73□□□□□ -0.85
VARS-227ENST00000489979 OR2F1Q13607 317 aa9.73□□□□□ -0.85
VARS-227ENST00000489979 GAMTQ14353 236 aa9.73□□□□□ -0.85
VARS-227ENST00000489979 CLINT1Q14677 625 aa9.73□□□□□ -0.85
VARS-227ENST00000489979 SPINK13Q1W4C9 94 aa9.73□□□□□ -0.85
VARS-227ENST00000489979 SAMD13Q5VXD3 122 aa9.73□□□□□ -0.85
VARS-227ENST00000489979 TMEM268Q5VZI3 342 aa9.73□□□□□ -0.85
VARS-227ENST00000489979 OR4C16Q8NGL9 310 aa9.73□□□□□ -0.85
VARS-227ENST00000489979 KRTAP1-5Q9BYS1 174 aa9.73□□□□□ -0.85
VARS-227ENST00000489979 MTFP1Q9UDX5 166 aa9.73□□□□□ -0.85
VARS-227ENST00000489979 U3KQ87 197 aa9.73□□□□□ -0.85
VARS-227ENST00000489979 SNRPGP15A8MWD9 76 aa9.72□□□□□ -0.85
VARS-227ENST00000489979 FAM25AB3EWG3 89 aa9.72□□□□□ -0.85
VARS-227ENST00000489979 FAM25CB3EWG5 89 aa9.72□□□□□ -0.85
VARS-227ENST00000489979 FAM25GB3EWG6 89 aa9.72□□□□□ -0.85
VARS-227ENST00000489979 SULT1A3P0DMM9 295 aa9.72□□□□□ -0.85
VARS-227ENST00000489979 SULT1A4P0DMN0 295 aa9.72□□□□□ -0.85
VARS-227ENST00000489979 AZU1P20160 251 aa9.72□□□□□ -0.85
VARS-227ENST00000489979 TSPOP30536 169 aa9.72□□□□□ -0.85
VARS-227ENST00000489979 MEOX2P50222 304 aa9.72□□□□□ -0.85
VARS-227ENST00000489979 LGI3Q8N145 548 aa9.72□□□□□ -0.85
VARS-227ENST00000489979 OR11H7Q8NGC8 314 aa9.72□□□□□ -0.85
VARS-227ENST00000489979 SLC35E1Q96K37 410 aa9.72□□□□□ -0.85
VARS-227ENST00000489979 C17orf77Q96MU5 243 aa9.72□□□□□ -0.85
VARS-227ENST00000489979 RTBDNQ9BSG5 229 aaPredicted RBP9.72□□□□□ -0.85
VARS-227ENST00000489979 SLC25A32Q9H2D1 315 aa9.72□□□□□ -0.85
VARS-227ENST00000489979 C14orf166Q9Y224 244 aaKnown RBP9.72□□□□□ -0.85
VARS-227ENST00000489979 CBY3A6NI87 242 aa9.71□□□□□ -0.86
VARS-227ENST00000489979 RAB3DO95716 219 aa9.71□□□□□ -0.86
VARS-227ENST00000489979 FABP1P07148 127 aa9.71□□□□□ -0.86
VARS-227ENST00000489979 INAFM2P0DMQ5 153 aa9.71□□□□□ -0.86
VARS-227ENST00000489979 GPX4P36969 197 aaPredicted RBP9.71□□□□□ -0.86
VARS-227ENST00000489979 GALR1P47211 349 aa9.71□□□□□ -0.86
VARS-227ENST00000489979 CNN1P51911 297 aaKnown RBP9.71□□□□□ -0.86
VARS-227ENST00000489979 B2MP61769 119 aa9.71□□□□□ -0.86
VARS-227ENST00000489979 BAP18Q8IXM2 172 aa9.71□□□□□ -0.86
VARS-227ENST00000489979 TMEM229BQ8NBD8 167 aa9.71□□□□□ -0.86
VARS-227ENST00000489979 DTD1Q8TEA8 209 aa9.71□□□□□ -0.86
VARS-227ENST00000489979 RSG1Q9BU20 258 aa9.71□□□□□ -0.86
VARS-227ENST00000489979 CACFD1Q9UGQ2 172 aa9.71□□□□□ -0.86
VARS-227ENST00000489979 TMEM56-RWDD3S4R434 201 aa9.71□□□□□ -0.86
VARS-227ENST00000489979 TRAV12-2A0A075B6T6 113 aa9.7□□□□□ -0.86
VARS-227ENST00000489979 GABARAPH6UMI1 98 aa9.7□□□□□ -0.86
VARS-227ENST00000489979 DUSP14O95147 198 aaKnown RBP9.7□□□□□ -0.86
VARS-227ENST00000489979 GABARAPO95166 117 aa9.7□□□□□ -0.86
VARS-227ENST00000489979 BTF3P20290 206 aaKnown RBP9.7□□□□□ -0.86
VARS-227ENST00000489979 TAS2R19P59542 299 aa9.7□□□□□ -0.86
VARS-227ENST00000489979 NCS1P62166 190 aa9.7□□□□□ -0.86
VARS-227ENST00000489979 DLK1P80370 383 aa9.7□□□□□ -0.86
VARS-227ENST00000489979 TTC32Q5I0X7 151 aa9.7□□□□□ -0.86
VARS-227ENST00000489979 STEAP1BQ6NZ63 245 aa9.7□□□□□ -0.86
VARS-227ENST00000489979 RBKSQ9H477 322 aa9.7□□□□□ -0.86
VARS-227ENST00000489979 SLC25A22Q9H936 323 aa9.7□□□□□ -0.86
VARS-227ENST00000489979 MYCBP2O75592 4640 aa9.69□□□□□ -0.86
VARS-227ENST00000489979 CRYM-AS1A6NIL9 109 aa9.69□□□□□ -0.86
VARS-227ENST00000489979 GPR107Q5VW38 600 aa9.69□□□□□ -0.86
VARS-227ENST00000489979 IGFL4Q6B9Z1 124 aa9.69□□□□□ -0.86
VARS-227ENST00000489979 FAAP20Q6NZ36 180 aa9.69□□□□□ -0.86
VARS-227ENST00000489979 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.69□□□□□ -0.86
VARS-227ENST00000489979 GPR141Q7Z602 305 aa9.69□□□□□ -0.86
VARS-227ENST00000489979 UHRF2Q96PU4 802 aa9.69□□□□□ -0.86
VARS-227ENST00000489979 LINC01587Q99440 93 aa9.69□□□□□ -0.86
VARS-227ENST00000489979 TRGV9Q99603 122 aa9.69□□□□□ -0.86
VARS-227ENST00000489979 MRPS26Q9BYN8 205 aaKnown RBP9.69□□□□□ -0.86
VARS-227ENST00000489979 Q9H3A6 140 aa9.69□□□□□ -0.86
VARS-227ENST00000489979 PRR13Q9NZ81 148 aa9.69□□□□□ -0.86
VARS-227ENST00000489979 EXTL2Q9UBQ6 330 aa9.69□□□□□ -0.86
VARS-227ENST00000489979 HSPB7Q9UBY9 170 aa9.69□□□□□ -0.86
VARS-227ENST00000489979 VPS13BQ7Z7G8 4022 aa9.69□□□□□ -0.86
VARS-227ENST00000489979 ZNF98A6NK75 572 aa9.68□□□□□ -0.86
VARS-227ENST00000489979 VBP1P61758 197 aa9.68□□□□□ -0.86
VARS-227ENST00000489979 MZT2AQ6P582 158 aa9.68□□□□□ -0.86
VARS-227ENST00000489979 SLC25A39Q9BZJ4 359 aaPredicted RBP9.68□□□□□ -0.86
VARS-227ENST00000489979 IGKV1OR2-108A0A075B7D4 117 aa9.67□□□□□ -0.86
VARS-227ENST00000489979 TRAV8-2A0A0B4J237 113 aa9.67□□□□□ -0.86
VARS-227ENST00000489979 A0A1W2PPQ1 181 aa9.67□□□□□ -0.86
VARS-227ENST00000489979 BOLA2-SMG1P6H3BVE0 249 aa9.67□□□□□ -0.86
VARS-227ENST00000489979 HTN1P15515 57 aa9.67□□□□□ -0.86
VARS-227ENST00000489979 CCR6P51684 374 aa9.67□□□□□ -0.86
VARS-227ENST00000489979 ATP5IP56385 69 aaPredicted RBP9.67□□□□□ -0.86
VARS-227ENST00000489979 OR5I1Q13606 314 aa9.67□□□□□ -0.86
VARS-227ENST00000489979 SMCO1Q147U7 214 aa9.67□□□□□ -0.86
VARS-227ENST00000489979 SURF2Q15527 256 aaPredicted RBP9.67□□□□□ -0.86
VARS-227ENST00000489979 RNF182Q8N6D2 247 aa9.67□□□□□ -0.86
VARS-227ENST00000489979 IL22RA2Q969J5 263 aa9.67□□□□□ -0.86
VARS-227ENST00000489979 GNPNAT1Q96EK6 184 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms