RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 NECAP1Q8NC96 275 aa5.24□□□□□ -1.57
HDLBP-243ENST00000488923 OR5T1Q8NG75 326 aa5.24□□□□□ -1.57
HDLBP-243ENST00000488923 FAM110DQ8TAY7 271 aaPredicted RBP5.24□□□□□ -1.57
HDLBP-243ENST00000488923 FMC1Q96HJ9 113 aa5.24□□□□□ -1.57
HDLBP-243ENST00000488923 TBX15Q96SF7 602 aa5.24□□□□□ -1.57
HDLBP-243ENST00000488923 C12orf57Q99622 126 aa5.24□□□□□ -1.57
HDLBP-243ENST00000488923 ATG101Q9BSB4 218 aa5.24□□□□□ -1.57
HDLBP-243ENST00000488923 SHANK2-AS3Q9BTD1 123 aa5.24□□□□□ -1.57
HDLBP-243ENST00000488923 ELOVL1Q9BW60 279 aa5.24□□□□□ -1.57
HDLBP-243ENST00000488923 OTORQ9NRC9 128 aa5.24□□□□□ -1.57
HDLBP-243ENST00000488923 C21orf62Q9NYP8 219 aa5.24□□□□□ -1.57
HDLBP-243ENST00000488923 MRPL27Q9P0M9 148 aaKnown RBP5.24□□□□□ -1.57
HDLBP-243ENST00000488923 KLK9Q9UKQ9 250 aa5.24□□□□□ -1.57
HDLBP-243ENST00000488923 EPDR1Q9UM22 224 aa5.24□□□□□ -1.57
HDLBP-243ENST00000488923 SPTA1P02549 2419 aa5.24□□□□□ -1.57
HDLBP-243ENST00000488923 YLPM1P49750 1951 aaKnown RBP5.24□□□□□ -1.57
HDLBP-243ENST00000488923 TRAV20A0A0B4J274 112 aa5.23□□□□□ -1.57
HDLBP-243ENST00000488923 M0QZK8 103 aa5.23□□□□□ -1.57
HDLBP-243ENST00000488923 NDUFS7O75251 213 aa5.23□□□□□ -1.57
HDLBP-243ENST00000488923 IGHV4-39P01824 125 aa5.23□□□□□ -1.57
HDLBP-243ENST00000488923 SLC25A5P05141 298 aaKnown RBP5.23□□□□□ -1.57
HDLBP-243ENST00000488923 GP9P14770 177 aa5.23□□□□□ -1.57
HDLBP-243ENST00000488923 PAX1P15863 534 aa5.23□□□□□ -1.57
HDLBP-243ENST00000488923 SAA4P35542 130 aa5.23□□□□□ -1.57
HDLBP-243ENST00000488923 MYCNOSP40205 109 aa5.23□□□□□ -1.57
HDLBP-243ENST00000488923 LYZP61626 148 aa5.23□□□□□ -1.57
HDLBP-243ENST00000488923 PAX8Q06710 450 aa5.23□□□□□ -1.57
HDLBP-243ENST00000488923 PDE6HQ13956 83 aa5.23□□□□□ -1.57
HDLBP-243ENST00000488923 IBA57Q5T440 356 aaKnown RBP5.23□□□□□ -1.57
HDLBP-243ENST00000488923 BAGE2Q86Y30 109 aa5.23□□□□□ -1.57
HDLBP-243ENST00000488923 Q8N9W7 124 aa5.23□□□□□ -1.57
HDLBP-243ENST00000488923 CMTM2Q8TAZ6 248 aa5.23□□□□□ -1.57
HDLBP-243ENST00000488923 C10orf105Q8TEF2 133 aa5.23□□□□□ -1.57
HDLBP-243ENST00000488923 FRZBQ92765 325 aa5.23□□□□□ -1.57
HDLBP-243ENST00000488923 RNF125Q96EQ8 232 aa5.23□□□□□ -1.57
HDLBP-243ENST00000488923 IGF2BP2-AS1Q96M15 143 aa5.23□□□□□ -1.57
HDLBP-243ENST00000488923 GPR82Q96P67 336 aa5.23□□□□□ -1.57
HDLBP-243ENST00000488923 SLC25A39Q9BZJ4 359 aaPredicted RBP5.23□□□□□ -1.57
HDLBP-243ENST00000488923 MRPL36Q9P0J6 103 aaKnown RBP5.23□□□□□ -1.57
HDLBP-243ENST00000488923 KLF12Q9Y4X4 402 aa5.23□□□□□ -1.57
HDLBP-243ENST00000488923 TRAPPC1Q9Y5R8 145 aa5.23□□□□□ -1.57
HDLBP-243ENST00000488923 ICE1Q9Y2F5 2266 aa5.23□□□□□ -1.57
HDLBP-243ENST00000488923 TET2Q6N021 2002 aaPredicted RBP5.23□□□□□ -1.57
HDLBP-243ENST00000488923 PIEZO2Q9H5I5 2752 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 SPTBN2O15020 2390 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 IGHV7-81A0A0B4J1V7 117 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 TRAV5A0A0B4J249 113 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 IGHV1-69DA0A0B4J2H0 117 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 CENPVL3A0A0U1RRI6 287 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 A0A1W2PRD5 423 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 A0A1W2PRF3 423 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 A0A1W2PRM7 423 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 WI2-2373I1.2A0A1W2PRP0 233 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 PGPA6NDG6 321 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 VWC2LB2RUY7 222 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 H3BRN7 92 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 K7EN84 100 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 PHOX2AO14813 284 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 NDUFB8O95169 186 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 IGKV1-17P01599 117 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 IGHV1-69P01742 117 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 IGHV3-48P01763 117 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 PYYP10082 97 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 MGST1P10620 155 aaKnown RBP5.22□□□□□ -1.57
HDLBP-243ENST00000488923 SLC25A16P16260 332 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 PLA2G5P39877 138 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 ATP5J2P56134 94 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 RANP62826 216 aaKnown RBP5.22□□□□□ -1.57
HDLBP-243ENST00000488923 PRB3Q04118 309 aaPredicted RBP5.22□□□□□ -1.57
HDLBP-243ENST00000488923 Q56UQ5 140 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 CT83Q5H943 113 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 MORN5Q5VZ52 161 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 TMEM183AQ8IXX5 376 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 GNB1LQ9BYB4 327 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 AAMDCQ9H7C9 122 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 DMRT1Q9Y5R6 373 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 SOX21Q9Y651 276 aaPredicted RBP5.22□□□□□ -1.57
HDLBP-243ENST00000488923 V9GYV3 84 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 ZFHX4Q86UP3 3567 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 MALRD1Q5VYJ5 2156 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 DOCK11Q5JSL3 2073 aa5.22□□□□□ -1.57
HDLBP-243ENST00000488923 SMIM27A0A1W2PRY6 76 aa5.21□□□□□ -1.58
HDLBP-243ENST00000488923 XKRY2A2RUG3 117 aa5.21□□□□□ -1.58
HDLBP-243ENST00000488923 FAM231BA6NCW3 169 aa5.21□□□□□ -1.58
HDLBP-243ENST00000488923 PGPEP1LA6NFU8 196 aa5.21□□□□□ -1.58
HDLBP-243ENST00000488923 BMPR1BO00238 502 aa5.21□□□□□ -1.58
HDLBP-243ENST00000488923 GATCO43716 136 aaKnown RBP5.21□□□□□ -1.58
HDLBP-243ENST00000488923 ZNF253O75346 499 aa5.21□□□□□ -1.58
HDLBP-243ENST00000488923 BRI3O95415 125 aa5.21□□□□□ -1.58
HDLBP-243ENST00000488923 TCRAP04437 139 aa5.21□□□□□ -1.58
HDLBP-243ENST00000488923 APELAP0DMC3 54 aa5.21□□□□□ -1.58
HDLBP-243ENST00000488923 RPL7P18124 248 aaKnown RBP5.21□□□□□ -1.58
HDLBP-243ENST00000488923 CSN1S1P47710 185 aa5.21□□□□□ -1.58
HDLBP-243ENST00000488923 CRIP2P52943 208 aaPredicted RBP5.21□□□□□ -1.58
HDLBP-243ENST00000488923 RPL15P61313 204 aaKnown RBP5.21□□□□□ -1.58
HDLBP-243ENST00000488923 PSG9Q00887 426 aa5.21□□□□□ -1.58
HDLBP-243ENST00000488923 COTL1Q14019 142 aa5.21□□□□□ -1.58
HDLBP-243ENST00000488923 USF2Q15853 346 aaPredicted RBP5.21□□□□□ -1.58
HDLBP-243ENST00000488923 ASPHD1Q5U4P2 390 aa5.21□□□□□ -1.58
HDLBP-243ENST00000488923 HIST3H2BBQ8N257 126 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms