RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 LEMD1Q68G75 181 aa11.16□□□□□ -0.62
GCA-210ENST00000487445 KLHL30-AS1Q8NEE0 82 aa11.16□□□□□ -0.62
GCA-210ENST00000487445 MBD3L1Q8WWY6 194 aa11.16□□□□□ -0.62
GCA-210ENST00000487445 ZNF414Q96IQ9 312 aa11.16□□□□□ -0.62
GCA-210ENST00000487445 CITED2Q99967 270 aaPredicted RBP11.16□□□□□ -0.62
GCA-210ENST00000487445 MRPL27Q9P0M9 148 aaKnown RBP11.16□□□□□ -0.62
GCA-210ENST00000487445 NIPBLQ6KC79 2804 aaeCLIP11.16□□□□□ -0.62
GCA-210ENST00000487445 ZNF207O43670 478 aaKnown RBP11.16□□□□□ -0.62
GCA-210ENST00000487445 CCL20P78556 96 aa11.16□□□□□ -0.62
GCA-210ENST00000487445 RPEL1Q2QD12 228 aa11.16□□□□□ -0.62
GCA-210ENST00000487445 RNF2Q99496 336 aa11.16□□□□□ -0.62
GCA-210ENST00000487445 SLC25A39Q9BZJ4 359 aaPredicted RBP11.16□□□□□ -0.62
GCA-210ENST00000487445 PFDN2Q9UHV9 154 aa11.16□□□□□ -0.62
GCA-210ENST00000487445 IGHV4OR15-8A0A075B7B6 117 aa11.15□□□□□ -0.62
GCA-210ENST00000487445 A0A087WW49 117 aa11.15□□□□□ -0.62
GCA-210ENST00000487445 I3L521 148 aa11.15□□□□□ -0.62
GCA-210ENST00000487445 HBE1P02100 147 aa11.15□□□□□ -0.62
GCA-210ENST00000487445 UNQ9165/PRO28630Q6UXU0 137 aa11.15□□□□□ -0.62
GCA-210ENST00000487445 SLC7A5P1Q8MH63 180 aa11.15□□□□□ -0.62
GCA-210ENST00000487445 DUX3Q96PT4 197 aa11.15□□□□□ -0.62
GCA-210ENST00000487445 MRPL32Q9BYC8 188 aaKnown RBP11.15□□□□□ -0.62
GCA-210ENST00000487445 TMPRSS5Q9H3S3 457 aa11.15□□□□□ -0.62
GCA-210ENST00000487445 ZFAND3Q9H8U3 227 aa11.15□□□□□ -0.62
GCA-210ENST00000487445 TECRQ9NZ01 308 aaKnown RBP11.15□□□□□ -0.62
GCA-210ENST00000487445 RABAC1Q9UI14 185 aa11.15□□□□□ -0.62
GCA-210ENST00000487445 NDUFA4O00483 81 aa11.14□□□□□ -0.63
GCA-210ENST00000487445 OR7C2O60412 319 aa11.14□□□□□ -0.63
GCA-210ENST00000487445 STAG3L2P0CL84 134 aa11.14□□□□□ -0.63
GCA-210ENST00000487445 STAG3L3P0CL85 134 aa11.14□□□□□ -0.63
GCA-210ENST00000487445 ARL14EPLP0DKL9 152 aa11.14□□□□□ -0.63
GCA-210ENST00000487445 C8orf88P0DMB2 117 aa11.14□□□□□ -0.63
GCA-210ENST00000487445 TAS2R45P59539 299 aa11.14□□□□□ -0.63
GCA-210ENST00000487445 C4orf3Q8WVX3 66 aa11.14□□□□□ -0.63
GCA-210ENST00000487445 SCRT1Q9BWW7 348 aa11.14□□□□□ -0.63
GCA-210ENST00000487445 C2CD3Q4AC94 2353 aa11.14□□□□□ -0.63
GCA-210ENST00000487445 SETD2Q9BYW2 2564 aaPredicted RBP11.14□□□□□ -0.63
GCA-210ENST00000487445 HSPB1P04792 205 aaKnown RBP11.14□□□□□ -0.63
GCA-210ENST00000487445 FAM106AQ4KMX7 169 aa11.14□□□□□ -0.63
GCA-210ENST00000487445 C8orf86Q6ZUL3 223 aa11.14□□□□□ -0.63
GCA-210ENST00000487445 OR11H1Q8NG94 326 aa11.14□□□□□ -0.63
GCA-210ENST00000487445 LYPD6BQ8NI32 183 aa11.14□□□□□ -0.63
GCA-210ENST00000487445 DPF1Q92782 380 aa11.14□□□□□ -0.63
GCA-210ENST00000487445 TSSC4Q9Y5U2 329 aaPredicted RBP11.14□□□□□ -0.63
GCA-210ENST00000487445 IGHV3OR16-13A0A075B7E8 117 aa11.13□□□□□ -0.63
GCA-210ENST00000487445 IGHV3-49A0A0A0MS15 119 aa11.13□□□□□ -0.63
GCA-210ENST00000487445 IGHV3-74A0A0B4J1X5 117 aa11.13□□□□□ -0.63
GCA-210ENST00000487445 TRAV1-1A0A0B4J248 108 aa11.13□□□□□ -0.63
GCA-210ENST00000487445 A0A1B0GUS0 222 aa11.13□□□□□ -0.63
GCA-210ENST00000487445 CXorf1O96002 111 aa11.13□□□□□ -0.63
GCA-210ENST00000487445 SNRPCP09234 159 aaKnown RBP11.13□□□□□ -0.63
GCA-210ENST00000487445 FOXL1Q12952 345 aa11.13□□□□□ -0.63
GCA-210ENST00000487445 IL34Q6ZMJ4 242 aa11.13□□□□□ -0.63
GCA-210ENST00000487445 S100A7AQ86SG5 101 aa11.13□□□□□ -0.63
GCA-210ENST00000487445 COMMD7Q86VX2 200 aa11.13□□□□□ -0.63
GCA-210ENST00000487445 METTL26Q96S19 204 aa11.13□□□□□ -0.63
GCA-210ENST00000487445 SLC25A2Q9BXI2 301 aa11.13□□□□□ -0.63
GCA-210ENST00000487445 IGHV3-66A0A0C4DH42 116 aa11.12□□□□□ -0.63
GCA-210ENST00000487445 LINC00862A6NCI5 91 aa11.12□□□□□ -0.63
GCA-210ENST00000487445 OR10J4P0C629 311 aa11.12□□□□□ -0.63
GCA-210ENST00000487445 NPPCP23582 126 aa11.12□□□□□ -0.63
GCA-210ENST00000487445 HOXD3P31249 432 aaPredicted RBP11.12□□□□□ -0.63
GCA-210ENST00000487445 KHDC3LQ587J8 217 aa11.12□□□□□ -0.63
GCA-210ENST00000487445 OR1N2Q8NGR9 330 aa11.12□□□□□ -0.63
GCA-210ENST00000487445 MARC2Q969Z3 335 aa11.12□□□□□ -0.63
GCA-210ENST00000487445 SHANK2-AS3Q9BTD1 123 aa11.12□□□□□ -0.63
GCA-210ENST00000487445 GNG13Q9P2W3 67 aa11.12□□□□□ -0.63
GCA-210ENST00000487445 ZNF98A6NK75 572 aa11.12□□□□□ -0.63
GCA-210ENST00000487445 LINC01619G3V211 115 aa11.12□□□□□ -0.63
GCA-210ENST00000487445 H3BRN7 92 aa11.12□□□□□ -0.63
GCA-210ENST00000487445 PYYP10082 97 aa11.12□□□□□ -0.63
GCA-210ENST00000487445 SYNJ2BPP57105 145 aa11.12□□□□□ -0.63
GCA-210ENST00000487445 KRTAP10-3P60369 221 aa11.12□□□□□ -0.63
GCA-210ENST00000487445 NDUFA5Q16718 116 aa11.12□□□□□ -0.63
GCA-210ENST00000487445 NSUN5P1Q3KNT7 163 aa11.12□□□□□ -0.63
GCA-210ENST00000487445 GPHB5Q86YW7 130 aa11.12□□□□□ -0.63
GCA-210ENST00000487445 FAM167A-AS1Q96KT0 104 aa11.12□□□□□ -0.63
GCA-210ENST00000487445 APOHP02749 345 aaPredicted RBP11.11□□□□□ -0.63
GCA-210ENST00000487445 GCHFRP30047 84 aa11.11□□□□□ -0.63
GCA-210ENST00000487445 SLURP1P55000 103 aa11.11□□□□□ -0.63
GCA-210ENST00000487445 HAGHQ16775 308 aa11.11□□□□□ -0.63
GCA-210ENST00000487445 TM4SF20Q53R12 229 aa11.11□□□□□ -0.63
GCA-210ENST00000487445 PQLC2Q6ZP29 291 aa11.11□□□□□ -0.63
GCA-210ENST00000487445 PRIMA1Q86XR5 153 aa11.11□□□□□ -0.63
GCA-210ENST00000487445 WFDC12Q8WWY7 111 aa11.11□□□□□ -0.63
GCA-210ENST00000487445 TMEM190Q8WZ59 177 aa11.11□□□□□ -0.63
GCA-210ENST00000487445 ZNF503Q96F45 646 aa11.11□□□□□ -0.63
GCA-210ENST00000487445 PAXXQ9BUH6 204 aa11.11□□□□□ -0.63
GCA-210ENST00000487445 EIF5A2Q9GZV4 153 aaKnown RBP11.11□□□□□ -0.63
GCA-210ENST00000487445 OR51M1Q9H341 326 aa11.11□□□□□ -0.63
GCA-210ENST00000487445 ZP3P21754 424 aa11.1□□□□□ -0.63
GCA-210ENST00000487445 UBE2L3P68036 154 aaKnown RBP11.1□□□□□ -0.63
GCA-210ENST00000487445 CITED4Q96RK1 184 aa11.1□□□□□ -0.63
GCA-210ENST00000487445 S100A7P31151 101 aa11.09□□□□□ -0.63
GCA-210ENST00000487445 UBE2G2P60604 165 aa11.09□□□□□ -0.63
GCA-210ENST00000487445 KRTAP24-1Q3LI83 254 aa11.09□□□□□ -0.63
GCA-210ENST00000487445 TOR2AQ5JU69 321 aa11.09□□□□□ -0.63
GCA-210ENST00000487445 OR8I2Q8N0Y5 310 aa11.09□□□□□ -0.63
GCA-210ENST00000487445 TMEM231Q9H6L2 316 aa11.09□□□□□ -0.63
GCA-210ENST00000487445 DAZ1Q9NQZ3 744 aaKnown RBP11.09□□□□□ -0.63
GCA-210ENST00000487445 CRYBB3P26998 211 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 257.9 ms