RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 PYYP10082 97 aa16.86■□□□□ 0.29
TRADD-202ENST00000486556 CBLN2Q8IUK8 224 aa16.86■□□□□ 0.29
TRADD-202ENST00000486556 MS4A10Q96PG2 267 aa16.86■□□□□ 0.29
TRADD-202ENST00000486556 TMEM14CQ9P0S9 112 aa16.86■□□□□ 0.29
TRADD-202ENST00000486556 LINC00527Q9UJ94 153 aa16.86■□□□□ 0.29
TRADD-202ENST00000486556 VPREB3Q9UKI3 123 aa16.86■□□□□ 0.29
TRADD-202ENST00000486556 CLEC3BP05452 202 aa16.86■□□□□ 0.29
TRADD-202ENST00000486556 SHANK2-AS3Q9BTD1 123 aa16.86■□□□□ 0.29
TRADD-202ENST00000486556 RNF24Q9Y225 148 aa16.86■□□□□ 0.29
TRADD-202ENST00000486556 CSPG4Q6UVK1 2322 aa16.86■□□□□ 0.29
TRADD-202ENST00000486556 CSMD1Q96PZ7 3565 aa16.86■□□□□ 0.29
TRADD-202ENST00000486556 SMAD7O15105 426 aaKnown RBP16.85■□□□□ 0.29
TRADD-202ENST00000486556 ZNF343Q6P1L6 599 aa16.85■□□□□ 0.29
TRADD-202ENST00000486556 PRELID1Q9Y255 219 aa16.85■□□□□ 0.29
TRADD-202ENST00000486556 SCO2A0A1W2PP80 73 aa16.84■□□□□ 0.29
TRADD-202ENST00000486556 S100A7P31151 101 aa16.84■□□□□ 0.29
TRADD-202ENST00000486556 ADMP35318 185 aa16.84■□□□□ 0.29
TRADD-202ENST00000486556 AKR1C3P42330 323 aa16.84■□□□□ 0.29
TRADD-202ENST00000486556 SUMO1P63165 101 aaKnown RBP16.84■□□□□ 0.29
TRADD-202ENST00000486556 ZNF600Q6ZNG1 722 aa16.84■□□□□ 0.29
TRADD-202ENST00000486556 USMG5Q96IX5 58 aa16.84■□□□□ 0.29
TRADD-202ENST00000486556 CHRDL1Q9BU40 450 aa16.84■□□□□ 0.29
TRADD-202ENST00000486556 H3BRN7 92 aa16.84■□□□□ 0.29
TRADD-202ENST00000486556 TRGV3P03979 118 aa16.84■□□□□ 0.29
TRADD-202ENST00000486556 NBEAP1P0C6P0 100 aa16.84■□□□□ 0.29
TRADD-202ENST00000486556 GP9P14770 177 aa16.84■□□□□ 0.29
TRADD-202ENST00000486556 Q6ZS46 218 aa16.84■□□□□ 0.29
TRADD-202ENST00000486556 TCEAL7Q9BRU2 100 aa16.84■□□□□ 0.29
TRADD-202ENST00000486556 GPR183P32249 361 aa16.83■□□□□ 0.28
TRADD-202ENST00000486556 CCDC140Q96MF4 163 aa16.83■□□□□ 0.28
TRADD-202ENST00000486556 NOL4LQ96MY1 436 aaPredicted RBP16.83■□□□□ 0.28
TRADD-202ENST00000486556 TMEM242Q9NWH2 141 aa16.83■□□□□ 0.28
TRADD-202ENST00000486556 ZFHX3Q15911 3703 aa16.83■□□□□ 0.28
TRADD-202ENST00000486556 GGTLC3B5MD39 225 aa16.82■□□□□ 0.28
TRADD-202ENST00000486556 RPL23P62829 140 aaKnown RBP16.82■□□□□ 0.28
TRADD-202ENST00000486556 USF2Q15853 346 aaPredicted RBP16.82■□□□□ 0.28
TRADD-202ENST00000486556 BPIFA4PQ86YQ2 179 aa16.82■□□□□ 0.28
TRADD-202ENST00000486556 IGLV1-40P01703 118 aa16.82■□□□□ 0.28
TRADD-202ENST00000486556 HIST1H1EP10412 219 aaKnown RBP16.82■□□□□ 0.28
TRADD-202ENST00000486556 LEMD1Q68G75 181 aa16.82■□□□□ 0.28
TRADD-202ENST00000486556 CLEC19AQ6UXS0 136 aa16.82■□□□□ 0.28
TRADD-202ENST00000486556 ZNF98A6NK75 572 aa16.81■□□□□ 0.28
TRADD-202ENST00000486556 TGOLN2O43493 480 aa16.81■□□□□ 0.28
TRADD-202ENST00000486556 FLI1Q01543 452 aaPredicted RBP16.81■□□□□ 0.28
TRADD-202ENST00000486556 ADIRFQ15847 76 aa16.81■□□□□ 0.28
TRADD-202ENST00000486556 C15orf54Q8N8G6 183 aa16.81■□□□□ 0.28
TRADD-202ENST00000486556 DERL1Q9BUN8 251 aa16.81■□□□□ 0.28
TRADD-202ENST00000486556 CXorf65A6NEN9 183 aa16.8■□□□□ 0.28
TRADD-202ENST00000486556 BMPR1BO00238 502 aa16.8■□□□□ 0.28
TRADD-202ENST00000486556 HOXA3O43365 443 aaPredicted RBP16.8■□□□□ 0.28
TRADD-202ENST00000486556 CRYBB3P26998 211 aa16.8■□□□□ 0.28
TRADD-202ENST00000486556 MYCNOSP40205 109 aa16.8■□□□□ 0.28
TRADD-202ENST00000486556 TPPP2P59282 170 aa16.8■□□□□ 0.28
TRADD-202ENST00000486556 CFHR3Q02985 330 aa16.8■□□□□ 0.28
TRADD-202ENST00000486556 RELQ04864 619 aaPredicted RBP16.8■□□□□ 0.28
TRADD-202ENST00000486556 TMEM190Q8WZ59 177 aa16.8■□□□□ 0.28
TRADD-202ENST00000486556 PRSS22Q9GZN4 317 aa16.8■□□□□ 0.28
TRADD-202ENST00000486556 CREBBPQ92793 2442 aa16.8■□□□□ 0.28
TRADD-202ENST00000486556 PDZD2O15018 2839 aa16.8■□□□□ 0.28
TRADD-202ENST00000486556 CD5LO43866 347 aa16.8■□□□□ 0.28
TRADD-202ENST00000486556 ELOVL1Q9BW60 279 aa16.8■□□□□ 0.28
TRADD-202ENST00000486556 CTDSP1Q9GZU7 261 aa16.8■□□□□ 0.28
TRADD-202ENST00000486556 RABAC1Q9UI14 185 aa16.8■□□□□ 0.28
TRADD-202ENST00000486556 A0A0G2JLM5 398 aa16.79■□□□□ 0.28
TRADD-202ENST00000486556 HELTA6NFD8 242 aa16.79■□□□□ 0.28
TRADD-202ENST00000486556 C9JCJ5 164 aa16.79■□□□□ 0.28
TRADD-202ENST00000486556 RANP62826 216 aaKnown RBP16.79■□□□□ 0.28
TRADD-202ENST00000486556 BLNKQ8WV28 456 aa16.79■□□□□ 0.28
TRADD-202ENST00000486556 LY96Q9Y6Y9 160 aa16.79■□□□□ 0.28
TRADD-202ENST00000486556 MT-ND4LP03901 98 aa16.78■□□□□ 0.28
TRADD-202ENST00000486556 TOMM20LQ6UXN7 152 aa16.78■□□□□ 0.28
TRADD-202ENST00000486556 ZNF329Q86UD4 541 aa16.78■□□□□ 0.28
TRADD-202ENST00000486556 TMEM86BQ8N661 226 aa16.78■□□□□ 0.28
TRADD-202ENST00000486556 OR4F17Q8NGA8 305 aa16.78■□□□□ 0.28
TRADD-202ENST00000486556 C2CD4CQ8TF44 421 aa16.78■□□□□ 0.28
TRADD-202ENST00000486556 NPFFR1Q9GZQ6 430 aa16.78■□□□□ 0.28
TRADD-202ENST00000486556 TMEM89A2RUT3 159 aa16.77■□□□□ 0.28
TRADD-202ENST00000486556 RPL35P42766 123 aaKnown RBP16.77■□□□□ 0.28
TRADD-202ENST00000486556 LINC01551Q86U37 167 aa16.77■□□□□ 0.28
TRADD-202ENST00000486556 HIST1H2BAQ96A08 127 aa16.77■□□□□ 0.28
TRADD-202ENST00000486556 COLCA2A8K830 154 aa16.77■□□□□ 0.27
TRADD-202ENST00000486556 PF4V1P10720 104 aa16.77■□□□□ 0.27
TRADD-202ENST00000486556 RAB9AP51151 201 aa16.77■□□□□ 0.27
TRADD-202ENST00000486556 ZNF414Q96IQ9 312 aa16.77■□□□□ 0.27
TRADD-202ENST00000486556 GNB4Q9HAV0 340 aa16.77■□□□□ 0.27
TRADD-202ENST00000486556 ZNF586Q9NXT0 402 aa16.77■□□□□ 0.27
TRADD-202ENST00000486556 ZANQ9Y493 2812 aa16.77■□□□□ 0.27
TRADD-202ENST00000486556 PGPA6NDG6 321 aa16.76■□□□□ 0.27
TRADD-202ENST00000486556 CLDN34H7C241 214 aa16.76■□□□□ 0.27
TRADD-202ENST00000486556 IGHG4P01861 327 aa16.76■□□□□ 0.27
TRADD-202ENST00000486556 RNF212Q495C1 297 aa16.76■□□□□ 0.27
TRADD-202ENST00000486556 ANAPC16Q96DE5 110 aa16.76■□□□□ 0.27
TRADD-202ENST00000486556 ZFAND3Q9H8U3 227 aa16.76■□□□□ 0.27
TRADD-202ENST00000486556 TRBV20OR9-2A0A075B6H5 130 aa16.75■□□□□ 0.27
TRADD-202ENST00000486556 MRPS12O15235 138 aaKnown RBP16.75■□□□□ 0.27
TRADD-202ENST00000486556 SRP14P37108 136 aaKnown RBP16.75■□□□□ 0.27
TRADD-202ENST00000486556 KRTAP1-1Q07627 177 aa16.75■□□□□ 0.27
TRADD-202ENST00000486556 LYPD1Q8N2G4 141 aa16.75■□□□□ 0.27
TRADD-202ENST00000486556 SIGLECL1Q8N7X8 197 aa16.75■□□□□ 0.27
TRADD-202ENST00000486556 KLK15Q9H2R5 256 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms