RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 SOCS3O14543 225 aa18.47■□□□□ 0.55
HLA-F-227ENST00000485513 SFT2D2O95562 160 aa18.47■□□□□ 0.55
HLA-F-227ENST00000485513 S100A5P33763 92 aa18.47■□□□□ 0.55
HLA-F-227ENST00000485513 RPP30P78346 268 aaKnown RBP18.47■□□□□ 0.55
HLA-F-227ENST00000485513 PPP1R1AQ13522 171 aa18.47■□□□□ 0.55
HLA-F-227ENST00000485513 ZNF705AQ6ZN79 300 aaPredicted RBP18.47■□□□□ 0.55
HLA-F-227ENST00000485513 NEU1Q99519 415 aa18.47■□□□□ 0.55
HLA-F-227ENST00000485513 MAGT1Q9H0U3 335 aa18.47■□□□□ 0.55
HLA-F-227ENST00000485513 SYNGR2O43760 224 aa18.46■□□□□ 0.55
HLA-F-227ENST00000485513 FXYD7P58549 80 aa18.46■□□□□ 0.55
HLA-F-227ENST00000485513 DNAH6Q9C0G6 4158 aa18.46■□□□□ 0.55
HLA-F-227ENST00000485513 ZNF705FA8MVS1 300 aaPredicted RBP18.45■□□□□ 0.54
HLA-F-227ENST00000485513 WRBO00258 174 aa18.45■□□□□ 0.54
HLA-F-227ENST00000485513 ISLRO14498 428 aa18.45■□□□□ 0.54
HLA-F-227ENST00000485513 CFDP00746 253 aaPredicted RBP18.45■□□□□ 0.54
HLA-F-227ENST00000485513 HOXB5P09067 269 aa18.45■□□□□ 0.54
HLA-F-227ENST00000485513 ZNF705DP0CH99 300 aaPredicted RBP18.45■□□□□ 0.54
HLA-F-227ENST00000485513 ZNF705BP0CI00 300 aaPredicted RBP18.45■□□□□ 0.54
HLA-F-227ENST00000485513 GGNBP1Q5YKI7 109 aa18.45■□□□□ 0.54
HLA-F-227ENST00000485513 OR4B1Q8NGF8 309 aa18.45■□□□□ 0.54
HLA-F-227ENST00000485513 CLUHP3Q96NS8 147 aa18.45■□□□□ 0.54
HLA-F-227ENST00000485513 CCDC160A6NGH7 325 aa18.44■□□□□ 0.54
HLA-F-227ENST00000485513 AMBPP02760 352 aa18.44■□□□□ 0.54
HLA-F-227ENST00000485513 SPATA31B1PQ5VZV4 182 aa18.44■□□□□ 0.54
HLA-F-227ENST00000485513 GSG1LQ6UXU4 331 aa18.44■□□□□ 0.54
HLA-F-227ENST00000485513 IGHV3OR16-12A0A075B7B8 117 aa18.43■□□□□ 0.54
HLA-F-227ENST00000485513 TMEM189A5PLL7 270 aa18.43■□□□□ 0.54
HLA-F-227ENST00000485513 SMIM9A6NGZ8 99 aa18.43■□□□□ 0.54
HLA-F-227ENST00000485513 PRSS46E5RG02 174 aa18.43■□□□□ 0.54
HLA-F-227ENST00000485513 SAMD13Q5VXD3 122 aa18.43■□□□□ 0.54
HLA-F-227ENST00000485513 CCDC190Q86UF4 302 aa18.43■□□□□ 0.54
HLA-F-227ENST00000485513 ZNF709Q8N972 641 aa18.43■□□□□ 0.54
HLA-F-227ENST00000485513 SPART-AS1P0CW21 52 aa18.42■□□□□ 0.54
HLA-F-227ENST00000485513 MEOX2P50222 304 aa18.42■□□□□ 0.54
HLA-F-227ENST00000485513 SPANXN5Q5MJ07 72 aa18.42■□□□□ 0.54
HLA-F-227ENST00000485513 EBLN2Q6P2I7 272 aa18.42■□□□□ 0.54
HLA-F-227ENST00000485513 SLC45A2Q9UMX9 530 aa18.42■□□□□ 0.54
HLA-F-227ENST00000485513 F6UB75 175 aa18.41■□□□□ 0.54
HLA-F-227ENST00000485513 GALR1P47211 349 aa18.41■□□□□ 0.54
HLA-F-227ENST00000485513 EMP1P54849 157 aa18.41■□□□□ 0.54
HLA-F-227ENST00000485513 PAX9P55771 341 aa18.41■□□□□ 0.54
HLA-F-227ENST00000485513 C16orf92Q96LL3 132 aa18.41■□□□□ 0.54
HLA-F-227ENST00000485513 SLC35B3Q9H1N7 401 aa18.41■□□□□ 0.54
HLA-F-227ENST00000485513 SLC25A32Q9H2D1 315 aa18.41■□□□□ 0.54
HLA-F-227ENST00000485513 SLC25A22Q9H936 323 aa18.41■□□□□ 0.54
HLA-F-227ENST00000485513 RFNGQ9Y644 331 aa18.41■□□□□ 0.54
HLA-F-227ENST00000485513 A0A0J9YX75 114 aa18.4■□□□□ 0.54
HLA-F-227ENST00000485513 H3BP45 60 aa18.4■□□□□ 0.54
HLA-F-227ENST00000485513 UBE2MP61081 183 aaKnown RBP18.4■□□□□ 0.54
HLA-F-227ENST00000485513 PSG9Q00887 426 aa18.4■□□□□ 0.54
HLA-F-227ENST00000485513 FAM78BQ5VT40 261 aa18.4■□□□□ 0.54
HLA-F-227ENST00000485513 BPIFCQ8NFQ6 507 aa18.4■□□□□ 0.54
HLA-F-227ENST00000485513 NDUFAF3Q9BU61 184 aa18.4■□□□□ 0.54
HLA-F-227ENST00000485513 SCRT1Q9BWW7 348 aa18.4■□□□□ 0.54
HLA-F-227ENST00000485513 RPRMQ9NS64 109 aa18.4■□□□□ 0.54
HLA-F-227ENST00000485513 STRAPQ9Y3F4 350 aaKnown RBP18.4■□□□□ 0.54
HLA-F-227ENST00000485513 ZNF98A6NK75 572 aa18.39■□□□□ 0.53
HLA-F-227ENST00000485513 ORM2P19652 201 aa18.39■□□□□ 0.53
HLA-F-227ENST00000485513 GATA2P23769 480 aaPredicted RBP18.39■□□□□ 0.53
HLA-F-227ENST00000485513 AKR1C1Q04828 323 aa18.39■□□□□ 0.53
HLA-F-227ENST00000485513 GOLT1BQ9Y3E0 138 aa18.39■□□□□ 0.53
HLA-F-227ENST00000485513 SPANXN2Q5MJ10 180 aa18.38■□□□□ 0.53
HLA-F-227ENST00000485513 ACOT7LQ6ZUV0 252 aa18.38■□□□□ 0.53
HLA-F-227ENST00000485513 C20orf173Q96LM9 149 aa18.38■□□□□ 0.53
HLA-F-227ENST00000485513 RSG1Q9BU20 258 aa18.38■□□□□ 0.53
HLA-F-227ENST00000485513 TMEM147Q9BVK8 224 aa18.38■□□□□ 0.53
HLA-F-227ENST00000485513 P0DMU3 169 aa18.37■□□□□ 0.53
HLA-F-227ENST00000485513 FAM231AP0DMU4 169 aa18.37■□□□□ 0.53
HLA-F-227ENST00000485513 FAM231CP0DMU5 169 aa18.37■□□□□ 0.53
HLA-F-227ENST00000485513 S100A7P31151 101 aa18.37■□□□□ 0.53
HLA-F-227ENST00000485513 TMEM182Q6ZP80 229 aaPredicted RBP18.37■□□□□ 0.53
HLA-F-227ENST00000485513 OR4D5Q8NGN0 318 aa18.37■□□□□ 0.53
HLA-F-227ENST00000485513 SRRQ9GZT4 340 aa18.37■□□□□ 0.53
HLA-F-227ENST00000485513 HECTD4Q9Y4D8 3996 aa18.37■□□□□ 0.53
HLA-F-227ENST00000485513 TEX48A0A1B0GUV7 120 aa18.36■□□□□ 0.53
HLA-F-227ENST00000485513 C9orf170A2RU37 121 aa18.36■□□□□ 0.53
HLA-F-227ENST00000485513 ADAP1O75689 374 aa18.36■□□□□ 0.53
HLA-F-227ENST00000485513 ID3Q02535 119 aa18.36■□□□□ 0.53
HLA-F-227ENST00000485513 OR1B1Q8NGR6 318 aa18.36■□□□□ 0.53
HLA-F-227ENST00000485513 C17orf77Q96MU5 243 aa18.36■□□□□ 0.53
HLA-F-227ENST00000485513 GPR82Q96P67 336 aa18.36■□□□□ 0.53
HLA-F-227ENST00000485513 C7orf50Q9BRJ6 194 aaKnown RBP18.36■□□□□ 0.53
HLA-F-227ENST00000485513 DOK5Q9P104 306 aa18.36■□□□□ 0.53
HLA-F-227ENST00000485513 DKK2Q9UBU2 259 aa18.36■□□□□ 0.53
HLA-F-227ENST00000485513 INPP1P49441 399 aa18.35■□□□□ 0.53
HLA-F-227ENST00000485513 POLR2GP62487 172 aaKnown RBP eCLIP18.35■□□□□ 0.53
HLA-F-227ENST00000485513 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.35■□□□□ 0.53
HLA-F-227ENST00000485513 TMEM144Q7Z5S9 345 aa18.35■□□□□ 0.53
HLA-F-227ENST00000485513 C1orf158Q8N1D5 194 aa18.35■□□□□ 0.53
HLA-F-227ENST00000485513 POM121L12Q8N7R1 296 aa18.35■□□□□ 0.53
HLA-F-227ENST00000485513 SMCO3A2RU48 225 aa18.34■□□□□ 0.53
HLA-F-227ENST00000485513 NDUFB6O95139 128 aa18.34■□□□□ 0.53
HLA-F-227ENST00000485513 HBE1P02100 147 aa18.34■□□□□ 0.53
HLA-F-227ENST00000485513 FAM222AQ5U5X8 452 aa18.34■□□□□ 0.53
HLA-F-227ENST00000485513 NIPSNAP3BQ9BS92 247 aa18.34■□□□□ 0.53
HLA-F-227ENST00000485513 RBM38Q9H0Z9 239 aaKnown RBP18.34■□□□□ 0.53
HLA-F-227ENST00000485513 NAP1L6A6NFF2 107 aa18.33■□□□□ 0.52
HLA-F-227ENST00000485513 A8MTW9 85 aa18.33■□□□□ 0.52
HLA-F-227ENST00000485513 PSENENQ9NZ42 101 aa18.33■□□□□ 0.52
HLA-F-227ENST00000485513 LOC102723971A0A1B0GUV8 181 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 199.6 ms