RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 GABARAPO95166 117 aa11.18□□□□□ -0.62
DDX56-210ENST00000479440 TNFAIP8O95379 198 aa11.18□□□□□ -0.62
DDX56-210ENST00000479440 CDS2O95674 445 aa11.18□□□□□ -0.62
DDX56-210ENST00000479440 OR5AC1P0C628 307 aa11.18□□□□□ -0.62
DDX56-210ENST00000479440 TBPP20226 339 aa11.18□□□□□ -0.62
DDX56-210ENST00000479440 TGFBR1P36897 503 aa11.18□□□□□ -0.62
DDX56-210ENST00000479440 NEDD8Q15843 81 aa11.18□□□□□ -0.62
DDX56-210ENST00000479440 GPR141Q7Z602 305 aa11.18□□□□□ -0.62
DDX56-210ENST00000479440 OR11H7Q8NGC8 314 aa11.18□□□□□ -0.62
DDX56-210ENST00000479440 OR13C8Q8NGS7 320 aa11.18□□□□□ -0.62
DDX56-210ENST00000479440 C16orf74Q96GX8 76 aa11.18□□□□□ -0.62
DDX56-210ENST00000479440 SLC35E1Q96K37 410 aa11.18□□□□□ -0.62
DDX56-210ENST00000479440 C20orf173Q96LM9 149 aa11.18□□□□□ -0.62
DDX56-210ENST00000479440 TMEM222Q9H0R3 208 aa11.18□□□□□ -0.62
DDX56-210ENST00000479440 EREGO14944 169 aa11.17□□□□□ -0.62
DDX56-210ENST00000479440 CRXO43186 299 aaPredicted RBP11.17□□□□□ -0.62
DDX56-210ENST00000479440 APOA1P02647 267 aa11.17□□□□□ -0.62
DDX56-210ENST00000479440 PRM2P04554 102 aa11.17□□□□□ -0.62
DDX56-210ENST00000479440 RPS19P39019 145 aaKnown RBP11.17□□□□□ -0.62
DDX56-210ENST00000479440 CNN1P51911 297 aaKnown RBP11.17□□□□□ -0.62
DDX56-210ENST00000479440 DLK1P80370 383 aa11.17□□□□□ -0.62
DDX56-210ENST00000479440 ZNF90Q03938 601 aa11.17□□□□□ -0.62
DDX56-210ENST00000479440 CDPF1Q6NVV7 123 aa11.17□□□□□ -0.62
DDX56-210ENST00000479440 BAP18Q8IXM2 172 aa11.17□□□□□ -0.62
DDX56-210ENST00000479440 TMEM256Q8N2U0 113 aa11.17□□□□□ -0.62
DDX56-210ENST00000479440 OR10J6PQ8NGY7 276 aa11.17□□□□□ -0.62
DDX56-210ENST00000479440 GNPNAT1Q96EK6 184 aaPredicted RBP11.17□□□□□ -0.62
DDX56-210ENST00000479440 ZNF503Q96F45 646 aa11.17□□□□□ -0.62
DDX56-210ENST00000479440 Q9H521 79 aa11.17□□□□□ -0.62
DDX56-210ENST00000479440 U3KQ87 197 aa11.17□□□□□ -0.62
DDX56-210ENST00000479440 SNRPGP15A8MWD9 76 aa11.16□□□□□ -0.62
DDX56-210ENST00000479440 CD3DP04234 171 aa11.16□□□□□ -0.62
DDX56-210ENST00000479440 FCN2Q15485 313 aa11.16□□□□□ -0.62
DDX56-210ENST00000479440 SCGB2B2Q4G0G5 96 aa11.16□□□□□ -0.62
DDX56-210ENST00000479440 LHFPL5Q8TAF8 219 aa11.16□□□□□ -0.62
DDX56-210ENST00000479440 PGPEP1Q9NXJ5 209 aa11.16□□□□□ -0.62
DDX56-210ENST00000479440 COMMD3Q9UBI1 195 aa11.16□□□□□ -0.62
DDX56-210ENST00000479440 C14orf166Q9Y224 244 aaKnown RBP11.16□□□□□ -0.62
DDX56-210ENST00000479440 MRPS16Q9Y3D3 137 aaKnown RBP11.16□□□□□ -0.62
DDX56-210ENST00000479440 TIMM8BQ9Y5J9 83 aaPredicted RBP11.16□□□□□ -0.62
DDX56-210ENST00000479440 IGKV1D-37A0A075B6S9 117 aa11.15□□□□□ -0.62
DDX56-210ENST00000479440 TEX13DA0A0J9YY54 714 aaPredicted RBP11.15□□□□□ -0.62
DDX56-210ENST00000479440 BOLA2-SMG1P6H3BVE0 249 aa11.15□□□□□ -0.62
DDX56-210ENST00000479440 ADAP1O75689 374 aa11.15□□□□□ -0.62
DDX56-210ENST00000479440 ZNF182P17025 639 aaPredicted RBP11.15□□□□□ -0.62
DDX56-210ENST00000479440 ELK1P19419 428 aa11.15□□□□□ -0.62
DDX56-210ENST00000479440 AZU1P20160 251 aa11.15□□□□□ -0.62
DDX56-210ENST00000479440 M6PRP20645 277 aa11.15□□□□□ -0.62
DDX56-210ENST00000479440 TAS2R60P59551 318 aa11.15□□□□□ -0.62
DDX56-210ENST00000479440 ERVFC1-1P60608 527 aa11.15□□□□□ -0.62
DDX56-210ENST00000479440 RNASE12Q5GAN4 147 aaKnown RBP11.15□□□□□ -0.62
DDX56-210ENST00000479440 TMEM268Q5VZI3 342 aa11.15□□□□□ -0.62
DDX56-210ENST00000479440 SELENOHQ8IZQ5 122 aaKnown RBP11.15□□□□□ -0.62
DDX56-210ENST00000479440 LGI3Q8N145 548 aa11.15□□□□□ -0.62
DDX56-210ENST00000479440 TERB2Q8NHR7 220 aa11.15□□□□□ -0.62
DDX56-210ENST00000479440 RXFP4Q8TDU9 374 aa11.15□□□□□ -0.62
DDX56-210ENST00000479440 C18orf15Q96N68 181 aa11.15□□□□□ -0.62
DDX56-210ENST00000479440 SLC25A32Q9H2D1 315 aa11.15□□□□□ -0.62
DDX56-210ENST00000479440 NAA60Q9H7X0 242 aa11.15□□□□□ -0.62
DDX56-210ENST00000479440 ZNF586Q9NXT0 402 aa11.15□□□□□ -0.62
DDX56-210ENST00000479440 SULT1A3P0DMM9 295 aa11.14□□□□□ -0.63
DDX56-210ENST00000479440 SULT1A4P0DMN0 295 aa11.14□□□□□ -0.63
DDX56-210ENST00000479440 GPX4P36969 197 aaPredicted RBP11.14□□□□□ -0.63
DDX56-210ENST00000479440 LINC00315P59091 139 aa11.14□□□□□ -0.63
DDX56-210ENST00000479440 MARCH1Q8TCQ1 289 aa11.14□□□□□ -0.63
DDX56-210ENST00000479440 DTD1Q8TEA8 209 aa11.14□□□□□ -0.63
DDX56-210ENST00000479440 GLYATL2Q8WU03 294 aa11.14□□□□□ -0.63
DDX56-210ENST00000479440 UHRF2Q96PU4 802 aa11.14□□□□□ -0.63
DDX56-210ENST00000479440 LINC01587Q99440 93 aa11.14□□□□□ -0.63
DDX56-210ENST00000479440 SLC25A22Q9H936 323 aa11.14□□□□□ -0.63
DDX56-210ENST00000479440 TRAV12-2A0A075B6T6 113 aa11.13□□□□□ -0.63
DDX56-210ENST00000479440 TRAV26-1A0A087WT03 109 aa11.13□□□□□ -0.63
DDX56-210ENST00000479440 CFDP00746 253 aaPredicted RBP11.13□□□□□ -0.63
DDX56-210ENST00000479440 S100A7P31151 101 aa11.13□□□□□ -0.63
DDX56-210ENST00000479440 XGP55808 180 aa11.13□□□□□ -0.63
DDX56-210ENST00000479440 LSM3P62310 102 aaKnown RBP11.13□□□□□ -0.63
DDX56-210ENST00000479440 OR5I1Q13606 314 aa11.13□□□□□ -0.63
DDX56-210ENST00000479440 OR2F1Q13607 317 aa11.13□□□□□ -0.63
DDX56-210ENST00000479440 GAMTQ14353 236 aa11.13□□□□□ -0.63
DDX56-210ENST00000479440 MEF2DQ14814 521 aa11.13□□□□□ -0.63
DDX56-210ENST00000479440 TMEM144Q7Z5S9 345 aa11.13□□□□□ -0.63
DDX56-210ENST00000479440 OR1B1Q8NGR6 318 aa11.13□□□□□ -0.63
DDX56-210ENST00000479440 GPR82Q96P67 336 aa11.13□□□□□ -0.63
DDX56-210ENST00000479440 TRGV9Q99603 122 aa11.13□□□□□ -0.63
DDX56-210ENST00000479440 SLC45A2Q9UMX9 530 aa11.13□□□□□ -0.63
DDX56-210ENST00000479440 HTN1P15515 57 aa11.12□□□□□ -0.63
DDX56-210ENST00000479440 ATP5IP56385 69 aaPredicted RBP11.12□□□□□ -0.63
DDX56-210ENST00000479440 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.12□□□□□ -0.63
DDX56-210ENST00000479440 ZNF493Q6ZR52 646 aa11.12□□□□□ -0.63
DDX56-210ENST00000479440 ZNF738Q8NE65 137 aa11.12□□□□□ -0.63
DDX56-210ENST00000479440 OR4D5Q8NGN0 318 aa11.12□□□□□ -0.63
DDX56-210ENST00000479440 TMEM263Q8WUH6 116 aaKnown RBP11.12□□□□□ -0.63
DDX56-210ENST00000479440 RSG1Q9BU20 258 aa11.12□□□□□ -0.63
DDX56-210ENST00000479440 NOP10Q9NPE3 64 aaKnown RBP11.12□□□□□ -0.63
DDX56-210ENST00000479440 PPP1R14DQ9NXH3 145 aa11.12□□□□□ -0.63
DDX56-210ENST00000479440 A0A0J9YY99 117 aa11.11□□□□□ -0.63
DDX56-210ENST00000479440 H3BNG1 76 aa11.11□□□□□ -0.63
DDX56-210ENST00000479440 TAS2R19P59542 299 aa11.11□□□□□ -0.63
DDX56-210ENST00000479440 ESRGQ1W209 222 aa11.11□□□□□ -0.63
DDX56-210ENST00000479440 OR4D10Q8NGI6 311 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms