RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 CCDC71LQ8N9Z2 235 aa14□□□□□ -0.17
PDLIM1-202ENST00000477757 C16orf92Q96LL3 132 aa14□□□□□ -0.17
PDLIM1-202ENST00000477757 ZNF586Q9NXT0 402 aa14□□□□□ -0.17
PDLIM1-202ENST00000477757 CACNG5Q9UF02 275 aa14□□□□□ -0.17
PDLIM1-202ENST00000477757 CNN1P51911 297 aaKnown RBP13.99□□□□□ -0.17
PDLIM1-202ENST00000477757 LINC00315P59091 139 aa13.99□□□□□ -0.17
PDLIM1-202ENST00000477757 LYZP61626 148 aa13.99□□□□□ -0.17
PDLIM1-202ENST00000477757 KLF9Q13886 244 aaPredicted RBP13.99□□□□□ -0.17
PDLIM1-202ENST00000477757 SNX29P2Q8IUI4 249 aa13.99□□□□□ -0.17
PDLIM1-202ENST00000477757 OR8I2Q8N0Y5 310 aa13.99□□□□□ -0.17
PDLIM1-202ENST00000477757 ARRDC1Q8N5I2 433 aa13.99□□□□□ -0.17
PDLIM1-202ENST00000477757 GNPNAT1Q96EK6 184 aaPredicted RBP13.99□□□□□ -0.17
PDLIM1-202ENST00000477757 UHRF2Q96PU4 802 aa13.99□□□□□ -0.17
PDLIM1-202ENST00000477757 TMEM222Q9H0R3 208 aa13.99□□□□□ -0.17
PDLIM1-202ENST00000477757 MRPS16Q9Y3D3 137 aaKnown RBP13.99□□□□□ -0.17
PDLIM1-202ENST00000477757 IGKV1D-37A0A075B6S9 117 aa13.98□□□□□ -0.17
PDLIM1-202ENST00000477757 ZFP92A6NM28 416 aa13.98□□□□□ -0.17
PDLIM1-202ENST00000477757 DUSP14O95147 198 aaKnown RBP13.98□□□□□ -0.17
PDLIM1-202ENST00000477757 CDS2O95674 445 aa13.98□□□□□ -0.17
PDLIM1-202ENST00000477757 TGFBR1P36897 503 aa13.98□□□□□ -0.17
PDLIM1-202ENST00000477757 ZNF90Q03938 601 aa13.98□□□□□ -0.17
PDLIM1-202ENST00000477757 RNASE10Q5GAN6 216 aaKnown RBP13.98□□□□□ -0.17
PDLIM1-202ENST00000477757 GPR141Q7Z602 305 aa13.98□□□□□ -0.17
PDLIM1-202ENST00000477757 RAB26Q9ULW5 256 aa13.98□□□□□ -0.17
PDLIM1-202ENST00000477757 LHFPL5Q8TAF8 219 aa13.97□□□□□ -0.17
PDLIM1-202ENST00000477757 RXFP4Q8TDU9 374 aa13.97□□□□□ -0.17
PDLIM1-202ENST00000477757 RBPMSQ93062 196 aaKnown RBP13.97□□□□□ -0.17
PDLIM1-202ENST00000477757 PPP1R14BQ96C90 147 aa13.97□□□□□ -0.17
PDLIM1-202ENST00000477757 C16orf74Q96GX8 76 aa13.97□□□□□ -0.17
PDLIM1-202ENST00000477757 HMCN2Q8NDA2 5059 aa13.97□□□□□ -0.17
PDLIM1-202ENST00000477757 TRAV26-1A0A087WT03 109 aa13.96□□□□□ -0.17
PDLIM1-202ENST00000477757 ANKRD65E5RJM6 399 aa13.96□□□□□ -0.17
PDLIM1-202ENST00000477757 M6PRP20645 277 aa13.96□□□□□ -0.17
PDLIM1-202ENST00000477757 FUSP35637 526 aaKnown RBP eCLIP13.96□□□□□ -0.17
PDLIM1-202ENST00000477757 RPS19P39019 145 aaKnown RBP13.96□□□□□ -0.17
PDLIM1-202ENST00000477757 ESRGQ1W209 222 aa13.96□□□□□ -0.17
PDLIM1-202ENST00000477757 OR13C8Q8NGS7 320 aa13.96□□□□□ -0.17
PDLIM1-202ENST00000477757 ZFAND1Q8TCF1 268 aa13.96□□□□□ -0.17
PDLIM1-202ENST00000477757 C17orf77Q96MU5 243 aa13.96□□□□□ -0.17
PDLIM1-202ENST00000477757 TIMM8BQ9Y5J9 83 aaPredicted RBP13.96□□□□□ -0.17
PDLIM1-202ENST00000477757 APOA1P02647 267 aa13.95□□□□□ -0.18
PDLIM1-202ENST00000477757 FABP1P07148 127 aa13.95□□□□□ -0.18
PDLIM1-202ENST00000477757 GALR1P47211 349 aa13.95□□□□□ -0.18
PDLIM1-202ENST00000477757 TMEM256Q8N2U0 113 aa13.95□□□□□ -0.18
PDLIM1-202ENST00000477757 TRAV12-2A0A075B6T6 113 aa13.94□□□□□ -0.18
PDLIM1-202ENST00000477757 SMIM31A0A1B0GVY4 71 aa13.94□□□□□ -0.18
PDLIM1-202ENST00000477757 SNRPGP15A8MWD9 76 aa13.94□□□□□ -0.18
PDLIM1-202ENST00000477757 BOLA2-SMG1P6H3BVE0 249 aa13.94□□□□□ -0.18
PDLIM1-202ENST00000477757 OR5AC1P0C628 307 aa13.94□□□□□ -0.18
PDLIM1-202ENST00000477757 TAS2R60P59551 318 aa13.94□□□□□ -0.18
PDLIM1-202ENST00000477757 ERVFC1-1P60608 527 aa13.94□□□□□ -0.18
PDLIM1-202ENST00000477757 GAMTQ14353 236 aa13.94□□□□□ -0.18
PDLIM1-202ENST00000477757 OR10J6PQ8NGY7 276 aa13.94□□□□□ -0.18
PDLIM1-202ENST00000477757 GLYATL2Q8WU03 294 aa13.94□□□□□ -0.18
PDLIM1-202ENST00000477757 SLC25A32Q9H2D1 315 aa13.94□□□□□ -0.18
PDLIM1-202ENST00000477757 CACFD1Q9UGQ2 172 aa13.94□□□□□ -0.18
PDLIM1-202ENST00000477757 U3KQ87 197 aa13.94□□□□□ -0.18
PDLIM1-202ENST00000477757 ZNF701M0R085 212 aaPredicted RBP13.93□□□□□ -0.18
PDLIM1-202ENST00000477757 EREGO14944 169 aa13.93□□□□□ -0.18
PDLIM1-202ENST00000477757 CD3DP04234 171 aa13.93□□□□□ -0.18
PDLIM1-202ENST00000477757 TBPP20226 339 aa13.93□□□□□ -0.18
PDLIM1-202ENST00000477757 OR5I1Q13606 314 aa13.93□□□□□ -0.18
PDLIM1-202ENST00000477757 MEF2DQ14814 521 aa13.93□□□□□ -0.18
PDLIM1-202ENST00000477757 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.93□□□□□ -0.18
PDLIM1-202ENST00000477757 SELENOHQ8IZQ5 122 aaKnown RBP13.93□□□□□ -0.18
PDLIM1-202ENST00000477757 RNASE8Q8TDE3 154 aaKnown RBP13.93□□□□□ -0.18
PDLIM1-202ENST00000477757 SLC35E1Q96K37 410 aa13.93□□□□□ -0.18
PDLIM1-202ENST00000477757 LINC01587Q99440 93 aa13.93□□□□□ -0.18
PDLIM1-202ENST00000477757 GPX4P36969 197 aaPredicted RBP13.92□□□□□ -0.18
PDLIM1-202ENST00000477757 KRTAP10-1P60331 282 aa13.92□□□□□ -0.18
PDLIM1-202ENST00000477757 OR2F1Q13607 317 aa13.92□□□□□ -0.18
PDLIM1-202ENST00000477757 NEDD8Q15843 81 aa13.92□□□□□ -0.18
PDLIM1-202ENST00000477757 TERB2Q8NHR7 220 aa13.92□□□□□ -0.18
PDLIM1-202ENST00000477757 RSG1Q9BU20 258 aa13.92□□□□□ -0.18
PDLIM1-202ENST00000477757 SLC25A39Q9BZJ4 359 aaPredicted RBP13.92□□□□□ -0.18
PDLIM1-202ENST00000477757 NOP10Q9NPE3 64 aaKnown RBP13.92□□□□□ -0.18
PDLIM1-202ENST00000477757 MDFICQ9P1T7 246 aa13.92□□□□□ -0.18
PDLIM1-202ENST00000477757 A0A0J9YY99 117 aa13.91□□□□□ -0.18
PDLIM1-202ENST00000477757 H3BNG1 76 aa13.91□□□□□ -0.18
PDLIM1-202ENST00000477757 ICAM4Q14773 271 aa13.91□□□□□ -0.18
PDLIM1-202ENST00000477757 TMEM268Q5VZI3 342 aa13.91□□□□□ -0.18
PDLIM1-202ENST00000477757 ZNF493Q6ZR52 646 aa13.91□□□□□ -0.18
PDLIM1-202ENST00000477757 TMEM144Q7Z5S9 345 aa13.91□□□□□ -0.18
PDLIM1-202ENST00000477757 LGI3Q8N145 548 aa13.91□□□□□ -0.18
PDLIM1-202ENST00000477757 LINC00612Q8N6U2 182 aa13.91□□□□□ -0.18
PDLIM1-202ENST00000477757 MARCH1Q8TCQ1 289 aa13.91□□□□□ -0.18
PDLIM1-202ENST00000477757 TMEM263Q8WUH6 116 aaKnown RBP13.91□□□□□ -0.18
PDLIM1-202ENST00000477757 SLC25A22Q9H936 323 aa13.91□□□□□ -0.18
PDLIM1-202ENST00000477757 COMMD3Q9UBI1 195 aa13.91□□□□□ -0.18
PDLIM1-202ENST00000477757 TRAV8-2A0A0B4J237 113 aa13.9□□□□□ -0.18
PDLIM1-202ENST00000477757 TEX13DA0A0J9YY54 714 aaPredicted RBP13.9□□□□□ -0.18
PDLIM1-202ENST00000477757 GABARAPH6UMI1 98 aa13.9□□□□□ -0.18
PDLIM1-202ENST00000477757 J3QL48 77 aa13.9□□□□□ -0.18
PDLIM1-202ENST00000477757 GABARAPO95166 117 aa13.9□□□□□ -0.18
PDLIM1-202ENST00000477757 SULT1A3P0DMM9 295 aa13.9□□□□□ -0.18
PDLIM1-202ENST00000477757 SULT1A4P0DMN0 295 aa13.9□□□□□ -0.18
PDLIM1-202ENST00000477757 ZNF182P17025 639 aaPredicted RBP13.9□□□□□ -0.18
PDLIM1-202ENST00000477757 HOXA5P20719 270 aa13.9□□□□□ -0.18
PDLIM1-202ENST00000477757 RNASE12Q5GAN4 147 aaKnown RBP13.9□□□□□ -0.18
PDLIM1-202ENST00000477757 RNF182Q8N6D2 247 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms