RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 CHCHD1Q96BP2 118 aaKnown RBP17.06■□□□□ 0.32
SH3D21-202ENST00000474766 OR4C46A6NHA9 309 aa17.05■□□□□ 0.32
SH3D21-202ENST00000474766 C17orf100A8MU93 164 aa17.05■□□□□ 0.32
SH3D21-202ENST00000474766 THBDP07204 575 aa17.05■□□□□ 0.32
SH3D21-202ENST00000474766 TNFRSF14Q92956 283 aa17.05■□□□□ 0.32
SH3D21-202ENST00000474766 PRNDQ9UKY0 176 aa17.05■□□□□ 0.32
SH3D21-202ENST00000474766 ZNF257Q9Y2Q1 563 aa17.05■□□□□ 0.32
SH3D21-202ENST00000474766 CA1P00915 261 aaPredicted RBP17.04■□□□□ 0.32
SH3D21-202ENST00000474766 RPL8P62917 257 aaKnown RBP17.04■□□□□ 0.32
SH3D21-202ENST00000474766 BVES-AS1Q5T3Y7 98 aa17.04■□□□□ 0.32
SH3D21-202ENST00000474766 WFDC8Q8IUA0 241 aa17.04■□□□□ 0.32
SH3D21-202ENST00000474766 A0A1B0GXF2 115 aa17.04■□□□□ 0.32
SH3D21-202ENST00000474766 MEF2CQ06413 473 aaPredicted RBP17.04■□□□□ 0.32
SH3D21-202ENST00000474766 MPV17L2Q567V2 206 aa17.04■□□□□ 0.32
SH3D21-202ENST00000474766 NUDT10Q8NFP7 164 aa17.04■□□□□ 0.32
SH3D21-202ENST00000474766 OR51B2Q9Y5P1 312 aa17.04■□□□□ 0.32
SH3D21-202ENST00000474766 HIST1H1EP10412 219 aaKnown RBP17.03■□□□□ 0.32
SH3D21-202ENST00000474766 FAM120AOSQ5T036 256 aa17.03■□□□□ 0.32
SH3D21-202ENST00000474766 SLC25A34Q6PIV7 304 aa17.03■□□□□ 0.32
SH3D21-202ENST00000474766 SMIM12Q96EX1 92 aa17.03■□□□□ 0.32
SH3D21-202ENST00000474766 SSBP3Q9BWW4 388 aaPredicted RBP17.03■□□□□ 0.32
SH3D21-202ENST00000474766 ZNF355PQ9NSJ1 428 aa17.03■□□□□ 0.32
SH3D21-202ENST00000474766 UPK2O00526 184 aa17.03■□□□□ 0.32
SH3D21-202ENST00000474766 COL8A2P25067 703 aa17.03■□□□□ 0.32
SH3D21-202ENST00000474766 BSPH1Q075Z2 132 aa17.03■□□□□ 0.32
SH3D21-202ENST00000474766 SSX8Q7RTT4 187 aa17.03■□□□□ 0.32
SH3D21-202ENST00000474766 SPATA12Q7Z6I5 190 aa17.03■□□□□ 0.32
SH3D21-202ENST00000474766 NUDT11Q96G61 164 aa17.03■□□□□ 0.32
SH3D21-202ENST00000474766 VPS25Q9BRG1 176 aa17.03■□□□□ 0.32
SH3D21-202ENST00000474766 SOX21Q9Y651 276 aaPredicted RBP17.03■□□□□ 0.32
SH3D21-202ENST00000474766 HRNRQ86YZ3 2850 aaPredicted RBP17.02■□□□□ 0.32
SH3D21-202ENST00000474766 SYS1-DBNDD2H3BUS1 97 aa17.02■□□□□ 0.32
SH3D21-202ENST00000474766 IGKV1-16P04430 117 aa17.02■□□□□ 0.32
SH3D21-202ENST00000474766 PRCDQ00LT1 54 aa17.02■□□□□ 0.32
SH3D21-202ENST00000474766 C2orf83Q53S99 150 aa17.02■□□□□ 0.32
SH3D21-202ENST00000474766 LDLRAD2Q5SZI1 272 aa17.02■□□□□ 0.32
SH3D21-202ENST00000474766 PET117Q6UWS5 81 aa17.02■□□□□ 0.32
SH3D21-202ENST00000474766 ZNF833PQ6ZTB9 187 aa17.02■□□□□ 0.32
SH3D21-202ENST00000474766 FAM167A-AS1Q96KT0 104 aa17.02■□□□□ 0.32
SH3D21-202ENST00000474766 AMMECR1Q9Y4X0 333 aaPredicted RBP17.02■□□□□ 0.32
SH3D21-202ENST00000474766 IGKV1OR2-108A0A075B7D4 117 aa17.01■□□□□ 0.31
SH3D21-202ENST00000474766 SRRM4A7MD48 611 aaKnown RBP17.01■□□□□ 0.31
SH3D21-202ENST00000474766 CD5LO43866 347 aa17.01■□□□□ 0.31
SH3D21-202ENST00000474766 MYOD1P15172 320 aa17.01■□□□□ 0.31
SH3D21-202ENST00000474766 NHLRC2Q8NBF2 726 aa17.01■□□□□ 0.31
SH3D21-202ENST00000474766 URB1-AS1Q96HZ7 61 aa17.01■□□□□ 0.31
SH3D21-202ENST00000474766 TMEM191AQ9H0A3 160 aa17.01■□□□□ 0.31
SH3D21-202ENST00000474766 MS4A6AQ9H2W1 248 aa17.01■□□□□ 0.31
SH3D21-202ENST00000474766 WASHC3Q9Y3C0 194 aa17.01■□□□□ 0.31
SH3D21-202ENST00000474766 ITPR2Q14571 2701 aa17.01■□□□□ 0.31
SH3D21-202ENST00000474766 M0QZ24 198 aa17.01■□□□□ 0.31
SH3D21-202ENST00000474766 NUDT3O95989 172 aa17.01■□□□□ 0.31
SH3D21-202ENST00000474766 OR5AL1P0C617 328 aa17.01■□□□□ 0.31
SH3D21-202ENST00000474766 ZNF714Q96N38 554 aa17.01■□□□□ 0.31
SH3D21-202ENST00000474766 ZNRD1Q9P1U0 126 aa17.01■□□□□ 0.31
SH3D21-202ENST00000474766 ABCA12Q86UK0 2595 aa17■□□□□ 0.31
SH3D21-202ENST00000474766 TNCP24821 2201 aa17■□□□□ 0.31
SH3D21-202ENST00000474766 PSMB11A5LHX3 300 aa17■□□□□ 0.31
SH3D21-202ENST00000474766 FCN3O75636 299 aa17■□□□□ 0.31
SH3D21-202ENST00000474766 UBE2L3P68036 154 aaKnown RBP17■□□□□ 0.31
SH3D21-202ENST00000474766 ZCCHC24Q8N2G6 241 aaKnown RBP17■□□□□ 0.31
SH3D21-202ENST00000474766 KIR3DL3Q8N743 410 aa17■□□□□ 0.31
SH3D21-202ENST00000474766 SLC25A2Q9BXI2 301 aa17■□□□□ 0.31
SH3D21-202ENST00000474766 PEX7O00628 323 aa16.99■□□□□ 0.31
SH3D21-202ENST00000474766 FAM71F2Q6NXP2 309 aa16.99■□□□□ 0.31
SH3D21-202ENST00000474766 OR1L8Q8NGR8 309 aa16.99■□□□□ 0.31
SH3D21-202ENST00000474766 C7orf69Q9H7B7 122 aa16.99■□□□□ 0.31
SH3D21-202ENST00000474766 RPH3ALQ9UNE2 315 aa16.99■□□□□ 0.31
SH3D21-202ENST00000474766 APCP25054 2843 aa16.99■□□□□ 0.31
SH3D21-202ENST00000474766 TACC2O95359 2948 aa16.99■□□□□ 0.31
SH3D21-202ENST00000474766 CYSRT1A8MQ03 144 aa16.99■□□□□ 0.31
SH3D21-202ENST00000474766 HIGD1CA8MV81 97 aa16.99■□□□□ 0.31
SH3D21-202ENST00000474766 TMEM178BH3BS89 294 aa16.99■□□□□ 0.31
SH3D21-202ENST00000474766 K7ERU9 68 aa16.99■□□□□ 0.31
SH3D21-202ENST00000474766 TNFRSF13BO14836 293 aaPredicted RBP16.99■□□□□ 0.31
SH3D21-202ENST00000474766 OR2T6Q8NHC8 308 aa16.99■□□□□ 0.31
SH3D21-202ENST00000474766 CLEC5AQ9NY25 188 aa16.99■□□□□ 0.31
SH3D21-202ENST00000474766 ROS1P08922 2347 aa16.98■□□□□ 0.31
SH3D21-202ENST00000474766 TEX50A0A1B0GTY4 177 aa16.98■□□□□ 0.31
SH3D21-202ENST00000474766 TMEM238C9JI98 176 aa16.98■□□□□ 0.31
SH3D21-202ENST00000474766 PSG1P11464 419 aa16.98■□□□□ 0.31
SH3D21-202ENST00000474766 HBBP68871 147 aa16.98■□□□□ 0.31
SH3D21-202ENST00000474766 ZNF329Q86UD4 541 aa16.98■□□□□ 0.31
SH3D21-202ENST00000474766 CACNG8Q8WXS5 425 aa16.98■□□□□ 0.31
SH3D21-202ENST00000474766 HINT2Q9BX68 163 aa16.98■□□□□ 0.31
SH3D21-202ENST00000474766 SCRT2Q9NQ03 307 aa16.98■□□□□ 0.31
SH3D21-202ENST00000474766 ABCA4P78363 2273 aa16.98■□□□□ 0.31
SH3D21-202ENST00000474766 PPIAL4EA0A075B759 164 aa16.97■□□□□ 0.31
SH3D21-202ENST00000474766 PPIAL4DF5H284 164 aa16.97■□□□□ 0.31
SH3D21-202ENST00000474766 PPIAL4FP0DN26 164 aa16.97■□□□□ 0.31
SH3D21-202ENST00000474766 CT83Q5H943 113 aa16.97■□□□□ 0.31
SH3D21-202ENST00000474766 TMEM200BQ69YZ2 307 aa16.97■□□□□ 0.31
SH3D21-202ENST00000474766 OSR1Q8TAX0 266 aaPredicted RBP16.97■□□□□ 0.31
SH3D21-202ENST00000474766 CSTL1Q9H114 145 aa16.97■□□□□ 0.31
SH3D21-202ENST00000474766 CBY3A6NI87 242 aa16.97■□□□□ 0.31
SH3D21-202ENST00000474766 LEPROTL1O95214 131 aa16.97■□□□□ 0.31
SH3D21-202ENST00000474766 GPR6P46095 362 aaPredicted RBP16.97■□□□□ 0.31
SH3D21-202ENST00000474766 HIST1H1AQ02539 215 aaPredicted RBP16.97■□□□□ 0.31
SH3D21-202ENST00000474766 SAA1P0DJI8 122 aaPredicted RBP16.96■□□□□ 0.31
SH3D21-202ENST00000474766 CD69Q07108 199 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms